Mya arenaria (softshell): 128242917
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Entry
128242917 CDS
T09995
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128242917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128242917
03036 Chromosome and associated proteins [BR:
maea03036
]
128242917
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128242917
Coactivators
SAGA/TFTC/STAGA complex
128242917
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128242917
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
128242917
NCBI-ProteinID:
XP_052816310
LinkDB
All DBs
Position
8:complement(34863036..34901346)
Genome browser
AA seq
897 aa
AA seq
DB search
MADHIPLDDIFHSETDESAVNALVASLESKLASPTNKEQSQSLTNPSINSNHVGNSTSIQ
SCTGIGVQNNNGHLSNATGNINNSNSKTVIRDNQIIGINSIHTNSPVPHQNSPLNTHRTA
SPKPVNSVNKPIHGSSPSVQVLQHSNLVGTTKQQIRTTPSPIQSSVNNVILHPHSPNVPQ
NVANPSVVSVQNDVLNRTSPSPHSVHQGLVQQTVVRNHPQGVVVNSSSQPFTQKTNVHIV
HSANVSTVINQAGLNPSLIAVRGQMPTSQITTIRPQIVTSSINASSPRPQGNVRIQAQRM
QSAPIRIAASQPNQINIAPRPGQQPNTITLPPGIVPGQGAVLMKNEHGQIVIVQQGAIPG
QHTNVTVASSNTPHKVQYVRHPASGQTQRLPTGQIVHIQHGTPGQPHTAVRQAVPSPINT
ARPQSGVRVSMPQNVQAMVRTSAPPSSGQQTVAPQVAAQQQQMIENVKKCKNFLSTLIKL
AQSQPEATVSSVRDLIQGLIDGKLEPELFTERLQKELKSSPQPYLVPFLKKSLPLLRQSL
LNNKMTIEGVKPPPLDIVQQGLPVSSMPPTAASSAQPQQVIPKFVGQAHHKPSAPRQGGS
GKPALNRQMNMVGGNVPSTVKAFQSRVAGLTPSPGPPQSHKRVKESFKADDDDINDVATM
GGVNLSEESKNILATNAEFIGAQIRSCKDEAFLHHGPLVKRIHAIASRHGVTEVPTEVAN
LISHATQERLRHIVEKLGTIADQRTEIYKINEKFDVSVDVKAQLKFLEELDVLERKRHDE
QEKEMLRRAVKSRSKQEDPEQIKLKQRAKDLQAQEMEEARQREANLTALAAIGPRKKRKL
GESPGSSSGLANGPSSSSSRTSLRPRIKRVNLRDLLFLMEQDKTLTKSNTLYRTFLK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcatatcccgctggatgatatttttcattcagagacagatgaaagtgctgtt
aacgctttagtagcttcactagaatcgaaattagcatcacctacaaataaggaacagtca
caaagtctaacaaatccgtccataaacagcaatcatgttggcaattctacgtccatacag
tcatgcactggaattggtgttcaaaataacaatggtcatttatcaaatgctacaggaaat
attaataattctaattccaaaacggtgattagagacaaccaaataattggaattaattct
atacataccaattcacctgtccctcatcaaaactcgccattaaatacccacagaacagcc
tcaccaaagcctgtgaatagtgtaaacaaaccaattcacggaagctcgccttcagtgcaa
gtcttgcaacactcaaatcttgtggggacaacaaagcagcaaattcgaacaacaccatca
cccatccagagcagtgtcaataacgttattcttcatccgcactcgccaaatgtgccacag
aatgtcgcaaatcccagtgtagtgtctgttcaaaacgatgtgctaaataggacttcgccg
tcacctcacagtgtgcatcaaggattagttcagcaaacagttgtacggaatcatcctcag
ggtgttgtagtaaactccagttctcagccttttactcaaaaaaccaatgtgcacattgtt
catagtgctaacgtgagtacagttattaaccaagcaggattaaatcctagtcttatagct
gtgcgggggcaaatgcctacttctcaaataacaacaattagaccacagatagtgacttct
tcaataaatgcatcatcaccgagacctcaaggaaatgttcgaatacaagctcaaagaatg
cagagtgcaccaataagaatagcagcttctcaacccaatcaaataaacattgcaccaaga
cctggtcagcaaccgaataccattacactgccccctggcattgtgccaggccagggagcg
gtgttgatgaagaatgaacatggccagattgtgatagtccagcagggggccattccaggt
cagcacacaaacgtgaccgtggcttcctccaacacaccacataaagtccagtatgtccgg
catccagctagtggtcagacccagcggctaccaactggacagatagttcatatccagcat
gggactcccggacagccacatacagctgtgcgacaggcagttccctccccaatcaatacg
gcacggccccagtcaggggtgcgagtctccatgccgcagaatgtacaggccatggttcga
acatccgcaccacccagctcaggtcagcagactgtggcaccacaagttgcggcccagcag
cagcagatgatcgaaaacgtgaagaaatgcaagaactttctgtccacactcatcaagctg
gctcagagtcagcccgaggccactgtcagcagtgtccgagatcttatacaaggacttatt
gatggcaagcttgagcctgaattgttcacagagagacttcagaaggagctcaagtcctca
ccacagccatatctggtaccctttcttaagaaaagcctgccattgttgaggcagtcgctc
ctgaacaacaagatgacgatagagggagtaaagcccccgcctctagatattgtacaacag
ggcttgcctgtcagcagtatgcctcctacagctgcatcaagtgcacaaccccagcaggtg
attccaaaatttgttgggcaggcacatcacaagcctagtgcacctcgccagggtgggtca
ggaaagccagccctcaacagacagatgaacatggtggggggtaatgtgcctagcacggta
aaggccttccagtctcgtgtcgcaggcctcacccccagtcctggccccccacaatctcac
aaacgagtcaaggagtcttttaaagcagacgacgatgacattaatgacgtggcaaccatg
ggtggagtgaatttgtcagaggagagcaaaaacatactcgccaccaatgctgagtttata
ggggcacaaatcaggtcgtgtaaggatgaagctttcctccatcatggacccttggtgaaa
aggatacatgcaatagctagtcggcacggagtcacagaagtcccgactgaggtggcaaac
ctcatatcccacgccacacaggaaagactaaggcacattgtggagaaattgggaaccata
gctgaccaacgcacagagatttataaaatcaatgagaagtttgatgtgtcagtggatgtc
aaggcccagctcaagtttctagaggagcttgacgtccttgagcgaaaacgacacgatgaa
caggaaaaggagatgctgcggagagctgtcaagtcacgttcaaaacaagaggatcccgag
cagattaaactgaaacagagagcaaaagatcttcaagcccaagaaatggaagaggctaga
caaagggaagcaaatctcacagcgctggctgcaataggtcctcgtaaaaaacggaaactt
ggtgaatccccaggttcatctagcggcctagcaaatgggccatcttcttcatcatctcga
acgagtttacggccaaggataaagagagttaatctcagggacctcttattcttaatggag
caagataaaacattaactaagtcaaacacattgtatagaacgttcttgaaatga
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