Mya arenaria (softshell): 128242996
Help
Entry
128242996 CDS
T09995
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128242996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128242996
Transcription factors [BR:
maea03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
128242996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
128242996
NCBI-ProteinID:
XP_052816422
LinkDB
All DBs
Position
8:complement(64333142..64391839)
Genome browser
AA seq
1118 aa
AA seq
DB search
MGLSEESDENVEEKFEELCLDLNMDKRTKEESWKNYQKIKKNYLLEGDQIHWLACALYES
CRRSKVPTVGRGTVEGNCVSLTRLLRSSRFSLIQFFNKMKKWSDMASLSQEFRDKVNRLE
RNFAVSTVIFKKFEPIFLAIFKSPADEAPRQPRSRKQRKLPCSLQDVFNFCWTMFVQVKG
NFPAISDDLVNSYHLLLCNIDWFYGNALLGGRKDLLNPEFSGLPDDFNSKDWRAPSETPC
IIKHLCDKHEGLEIEAKVIKEHWWKPHLKKLFDKKVLKGKLDTLSAVLDIGNFEANNEAI
NEAYEEFPLAHSRKSINNSYEEYVLSVGDFDERIFLDEDADEEIGTPARSREDVTGELTE
RMQQRSSLQQHVDQTRSLAPSTPLTGRRYLKEKDVTITPVSTATQSVSRLQHLLSGRKTA
PSDCLQEQLLEVGGQPLLDTIQQRVKDMGEIFCNHYVQPAEHHPGSQMDFAKRRLQLGES
LYYKALENIAQTEKSQRGNSISGLLEHDLFHRCLFACCLEITIFSYNSQRMFPWIVEIFD
LSPYHFYKVVELIVREEEGLTRDVVKHLNHIEECILEYLAWQSDSPVWEAIKVQGVPQSA
EVALPLQANTSQNSLWRKVLDKNTGSKDPLLSPTGPSAADRFSSPSPGSAKRRLFLGEAA
GKTRSGAESQAKSGLKTISITTQNQTQHLVAFQQIVTHDGRQVLIPVQTLAPPTVVSSSG
TTVSTGSSPEVTGDGKTKPVLHTPGHPRLKVVESKPATSEPSTAPTTTQASSPSKTQAQS
TAQQGKPAKGGSLAIFFRKVYHLAHVRLKDLCEKLDVQDEDLHRQMWTCLEHVIIQHTEL
LRDRHLDQLIMCSIYIIAKVTGKSQAFQDIMKCYRLQPQAQSHVYRSVLLTSRGRHTSGS
SDGSQPEASGTSSPVNGEKEIYTREKRAMPVRSSSTLPVPHPNSHPPTPTRLVGTGSCFE
FGEERGDLIQFYNQVFVTQIRKFATRFSANNQNGDVPPLSPLPPTRCHTTSPRRVSQRHS
VYISPHKVHRTKVAAENRLLYCFDRNPSKSLQMINNMIRIKSEAKTENKLDFTRKRPLEA
DEEEEGAISSPKRLNLFRRLQDVTSDRQESATKIVIVK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtcagaagaaagtgacgaaaatgtggaagaaaaatttgaagaactatgtttg
gatttgaacatggataaaagaactaaggaagaatcatggaagaactatcagaaaataaag
aaaaactatctgttggagggcgaccaaatccactggttggcatgtgccctgtacgaatcc
tgcagacgcagcaaggtgccaacagtgggacgtggaactgtggaggggaactgtgtgtcc
ttaaccagactgctgcgctcatccaggtttagtttaattcagttcttcaacaagatgaaa
aagtggtcggacatggcgagtctttcgcaagagttccgagacaaagtaaacagactggag
cgcaattttgcggtgtcaactgtgatatttaagaaatttgaaccaatatttttagccata
ttcaaaagtccagcggatgaggcacctagacagccaaggagtagaaaacaaaggaagctg
ccttgctccttacaagatgtctttaatttctgctggacaatgtttgtacaagttaaaggc
aacttcccagcaattagtgatgatctggtgaactcttatcacctgctactgtgcaatata
gactggttttatggcaatgctctgcttgggggacgcaaggaccttcttaatccagaattc
tcaggtttgcctgatgacttcaattccaaagactggcgagccccaagtgagactccatgc
atcatcaagcatttatgtgataaacacgagggtctagaaatagaggccaaggtcataaag
gaacactggtggaaaccacacctaaagaagctcttcgataagaaggtgctgaagggaaag
ctagataccttgtctgcagtcctggacattggaaatttcgaagctaacaatgaggcaata
aatgaggcttatgaagagtttccactggctcacagcagaaagtctataaacaactcatac
gaggagtacgttctgagtgttggagacttcgacgagcgcatctttcttgatgaagacgca
gatgaagagatcggtacgccagcccgttctcgggaggatgtcactggagagctgacagaa
cgcatgcagcaacgttctagtctacagcagcatgtagaccagactcggagcctggccccg
tcgaccccactgactggtcgacgctacctgaaggagaaggatgtcaccatcaccccggta
tccacggcaacccagagtgtcagccgtctacagcacttgttgtctggacgcaagacagcg
cccagtgattgtctgcaggaacaacttctggaggtaggaggccagcccctcctggacacc
atacagcagagagtcaaggacatgggggagatcttctgtaaccactatgtacagcctgca
gaacatcacccagggagtcagatggactttgcaaagcgtcgactccagcttggggaaagc
ctttactacaaagctctggaaaacatcgctcagacagagaaaagccagagaggaaacagc
atctcgggtttactggagcatgacctgtttcaccgatgcctgtttgcctgctgtttagaa
atcaccattttctcttacaactctcagaggatgttcccatggattgtggagatatttgat
ctgagcccgtaccacttctacaaggtggtggagctgattgtgcgggaggaggagggactg
accagggatgtggtcaaacacctcaaccatattgaggagtgtatcctggagtatctggca
tggcaaagtgactctcctgtctgggaggctataaaggttcaaggggtcccccagtccgca
gaagtggccctacccttgcaggccaatacctcacagaacagcctctggcgcaaagtcctt
gataaaaacacagggagtaaagaccccctgctatcccccacgggcccatcagcagctgac
cggttcagttcaccctcccctgggagtgccaagcgacgccttttcctgggggaggcggca
ggcaagactcgctctggggccgagtcccaggctaagtctgggttgaagaccatctccata
actactcaaaaccagacacagcacctagtggcattccagcaaattgttacacatgatgga
agacaggtgttgatcccagtgcagacattggctcctcccacagttgtctcatcctcgggt
accacggtgtccacgggctcaagcccagaggtcacgggtgatggcaagaccaagcctgtc
ctacatacgcccggccacccacgactcaaggtggtagagagcaaaccagccacgtcagag
ccatctacagccccaaccactacccaggccagttctccatccaagacccaggctcagtca
acagcacagcagggaaaacctgctaagggaggatcactggccatcttcttcaggaaggta
taccacctagcgcatgtgagactgaaggacctttgtgagaaattagatgttcaggatgag
gacctccatcggcagatgtggacctgcctggaacatgtgattattcagcacactgagctg
ctccgggacagacatcttgatcagctcatcatgtgctccatatatatcattgccaaggtg
acggggaagtctcaggcattccaagacattatgaagtgttaccggctccagcctcaggcc
cagagtcatgtgtaccgcagcgtcctcctcacatcccgggggaggcacacttctggaagt
tccgatggcagtcaaccggaggcaagcgggacatcgtcaccagtgaatggggagaaggag
atctacaccagggagaaacgggcaatgcctgtcaggtcatccagtacccttcctgtgccc
caccctaacagccatccccctacccccacccgcctcgtggggacggggtcatgttttgag
tttggtgaagaaagaggtgatctcatacaattctataatcaggtatttgttacacaaatc
aggaaattcgcaacaagattctcagccaataatcagaatggggatgttccgccgttgtca
ccacttcccccaacccggtgccacaccacgtccccacgtcgtgtctcacagcgacattct
gtgtatatctccccacacaaggtccatagaactaaagtggctgcagaaaacaggctccta
tactgcttcgatagaaacccttctaagagcctgcagatgataaacaacatgattcgtatc
aagagcgaggcaaagacggagaataagctggactttacccgcaaacgccccctggaggca
gacgaggaggaagagggggccatctcctcaccgaaaaggctcaacctcttccgtaggctg
caggatgtgacgtcagacaggcaggagtctgccaccaagatcgtcattgtgaaatag
DBGET
integrated database retrieval system
