KEGG   Mya arenaria (softshell): 128243093
Entry
128243093         CDS       T09995                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
maea  Mya arenaria (softshell)
Pathway
maea03020  RNA polymerase
maea03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128243093
  09124 Replication and repair
   03420 Nucleotide excision repair
    128243093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:maea03021]
    128243093
   03400 DNA repair and recombination proteins [BR:maea03400]
    128243093
Transcription machinery [BR:maea03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     128243093
DNA repair and recombination proteins [BR:maea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      128243093
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 128243093
NCBI-ProteinID: XP_052816578
LinkDB
Position
8:complement(17613884..17625724)
AA seq 273 aa
MPYANQPTVQISQVSDENIKFVLEDTDLSVANALRRVCIAEVPTMAIDWVQIEANSTVLF
DEFISHRIGLIPLTSDDVVDRMQYSRDCTCEDFCPDCSVEFTMDVKCQDDVTRHVTSADL
ISSNPKIVPVTSRNKEEGSEYDDTDDILIVKLRKGQEVKVKAFARKGFAKEHAKWNPTTG
VCFEYDPDNALRHTTYPKPEEWPKSEYSELEEDEYQAPFDPTGFPNKYFYNVESCGSMKP
ENIVFSALARLKEKLSNLQTQLSHEIQSDVLAV
NT seq 822 nt   +upstreamnt  +downstreamnt
atgccgtacgcaaaccaaccgacagtgcaaatcagccaggtgtctgatgaaaatataaaa
tttgtcctagaagacaccgatttgagtgttgcgaatgctctgaggagagtctgtattgca
gaagtaccaacaatggctatagactgggttcagattgaggccaactcaactgtgctgttt
gacgagtttatttcccatcgaattggactgattcccctcaccagtgatgatgtggtcgac
aggatgcagtactctagggactgtacatgtgaggatttctgcccagactgctctgtcgag
tttaccatggacgtgaaatgccaggatgatgtcacacgtcacgtaaccagcgccgacctc
atctccagcaatccaaaaattgtaccggtgacgtcacgcaacaaagaagagggaagtgaa
tatgacgacacagatgacatcttgattgtgaagttgcgaaagggtcaagaggtgaaggtg
aaggcgttcgccaggaaggggttcgcgaaggagcatgccaagtggaaccccacaacaggg
gtctgcttcgagtacgacccagataacgctctacgccacacaacataccccaaacctgag
gaatggcccaagagtgaatattccgagctcgaggaagatgaatatcaagcgccgtttgac
ccaacaggcttccctaacaagtatttctacaacgtagagtcctgcggttccatgaagcca
gagaatatcgtgttctcagcccttgcaagacttaaagaaaaactgtctaacctgcagacc
cagcttagccatgagatacagagtgatgtgctggctgtgtga

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