Mya arenaria (softshell): 128243124
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Entry
128243124 CDS
T09995
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128243124
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128243124
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128243124
Multi subunit type E3
LUBAC complex
128243124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
IBR
zf-C3HC4_2
Zn_ribbon_RanBP
zf-RING_5
ubiquitin
DUF4364
IBR_1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
128243124
NCBI-ProteinID:
XP_052816640
LinkDB
All DBs
Position
8:complement(38307434..38351662)
Genome browser
AA seq
991 aa
AA seq
DB search
MPFFRKGKNKNRWKCFYTDQLVKDHSVGQSLCELYFRTPCVDLDEFGAIKEVCDSGDLEM
EMIPTKECTIHLCKIPNFPKNCRFRLDDTGQTNKVCLSIDLRTRKTGDLSYTVRDKYWHE
IRKKVGKWQRFLIHFDDADNNFVELEQKLENTLALVNEAKPCSLFLLVAVQSPAEKRKSQ
LNNRHSRISLADLQIVTGQDRSSPQVLDDSDSDNDDAFGTDNGVPLNHTDGDTLGIEADL
IPPPFDDIAPYDPDGILQTLARYPTIFESVDNSSVLTNISNLCDSLHIHPNELPQTLESI
LKSAAEITLSGNICDINEDKSAPEKDNCTDGGKESNFPTYFSLGQFKSDIEDHDKHGPSP
IKPKLNSTYFPMGVVKRSSPEIRERKMSDSSKPSLKLKKCQETAKLLQTAINSSDVQHAQ
EYAKQLAVEKVEVDIDVKLKENKEEENQFDLKVSIEDKEASGVCITLKVRATDTLRDLKN
KMLLKHSFPVEVQRWIIGQRIPMDNETLAQCRVKNHGYTCFLYLMSAKSVGLSREEFRKK
QEMLLNPNAALGAMGPAGPCVDVTPGRGPRSPAPSPSPLVQEVHVHVEQDAKLKASVDNF
NIKEEKKTPEKMKEKFQQRQAANPQTRYRGHVEVPIHGAVGQTGADIRDVLNTIAPKLAA
MNIGARQPVEDEEPQQGWHCEACTYINLPTRPGCEVCSSARPLDYMMPPDYMITDEEKKR
LELEELIEKQTREAQMEERNQNFQQLQAADTDNVISNMHEFTCPICFEDIPRGDGVVLRE
CLHSFCKDCLRDAVKYNEEPVLKCPFQDENYTCNGVLQDREVKGLVNAELYGKYLARSLS
TAESQANNSFHCKTMDCPGWCIYEDLVNFFVCQVCGIENCLTCKAIHTGMNCKQYQDDLN
ARSTNDKAASQTKIMIKKMLDDGEAMNCPQCKVIVMKKEGCDWIMCSICKTEICWVTKQA
RWGPMGNGDISGGCKCRVNGVMCHPNCNNCH
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgccttttttcagaaaaggcaagaacaaaaatcgatggaagtgtttttacactgaccag
cttgtgaaagatcattctgtaggacaaagtctttgtgaactatattttcgaactccatgt
gtggatttggatgagtttggggctattaaggaagtttgtgattcgggcgatctggaaatg
gagatgatccccactaaagaatgcacaatacatttatgtaaaatcccaaattttcctaaa
aactgtcggtttcgtttggatgacacgggacaaactaacaaggtttgtttgagtatagac
ctccgtaccaggaagaccggggatctcagttatactgtacgcgacaaatattggcacgag
attcgcaagaaagttggcaaatggcagcggtttctgatccactttgatgatgctgacaac
aattttgttgagttggaacaaaagctagaaaacacccttgctcttgtgaatgaggctaag
ccttgcagcttatttcttctggtagctgtgcaatccccggcagagaaacgcaagagtcag
ctgaataacagacacagtcggatatcgctggccgacctacagatagtgactgggcaagac
agaagcagccctcaggtattagatgattctgatagtgataatgacgatgcatttggaaca
gacaatggtgttcctctgaaccatacagatggtgatactctgggaattgaagctgacctg
ataccacctccctttgacgacatagctccatatgatccagacggcattttgcagactcta
gcgaggtatccaacaatatttgaaagtgtggacaattccagtgtgttgacaaacatcagc
aatctctgtgatagccttcatattcatcctaacgagttaccgcagacactcgagtccatt
ttgaaatcagcagcggagataactttgtcgggtaatatttgtgatataaatgaagacaaa
tctgccccagaaaaggataattgcactgatggtggtaaagagtctaattttccgacctat
ttttctttgggacagtttaaatcagacattgaggatcatgataaacatggacctagtcca
atcaaaccaaaattaaattccacatactttccaatgggagtagtaaaaagaagttcacca
gaaataagggagagaaaaatgtcagatagttcaaagccgagtctaaagttgaagaagtgt
caagagaccgctaagttgctacagacagctataaatagcagtgatgttcagcatgcgcag
gagtacgccaaacaattggcagtcgagaaagttgaggtggatattgatgtcaagttaaaa
gaaaacaaggaagaagaaaaccagtttgatttgaaagtgagtatcgaggacaaggaagct
tcaggcgtgtgtattactctcaaagtccgtgccacagataccttacgcgatctcaaaaat
aagatgttgctgaagcacagtttcccggttgaagtccagcggtggattattggtcagcgg
attcccatggataacgagacccttgctcagtgtagggtgaaaaaccacggatatacatgc
ttcctgtatcttatgtccgccaagtctgtcggcctctcgcgggaagagttccgaaaaaag
caagaaatgctgctgaatccaaatgctgccctaggagccatgggcccagcaggtccttgt
gtggatgttacaccaggccggggaccaaggagccctgccccgagcccttccccccttgtg
caggaagtgcatgtacatgtggaacaagatgccaaactcaaggcaagtgtggacaacttt
aacatcaaggaagagaagaagactccagagaaaatgaaggaaaaattccagcagaggcag
gcagcaaatccccagactcgatataggggacatgttgaggttccaatacatggagcagtt
ggccaaacaggggctgacatacgtgatgtgcttaacacaattgctccaaaactcgctgcc
atgaatatcggggcacggcaaccagttgaggatgaggaaccacaacaaggatggcactgt
gaagcatgcacatatatcaacctacccacacgtccagggtgtgaggtgtgttcaagtgca
aggccactggactacatgatgccaccagactacatgattacggacgaagaaaagaagaga
ctcgaactggaggagcttatagagaaacagaccagggaggcccagatggaggagcgtaac
cagaacttccagcagctccaggccgcggacacagacaatgtcatctccaacatgcatgag
ttcacatgcccaatttgcttcgaggatattccacgcggagatggagtggttctcagagag
tgccttcactcattctgcaaggattgtctacgtgatgctgtcaaatacaacgaggagccg
gttttaaagtgcccgttccaagacgagaactacacttgtaatggcgtcctgcaggacagg
gaggtgaaagggcttgtaaatgcggagctgtacgggaaatatctagcaagaagcctatca
acagcagagagtcaggcaaataacagcttccactgcaagacaatggactgccccggatgg
tgcatctacgaggaccttgtaaatttcttcgtgtgtcaggtctgcggcatagagaactgc
cttacgtgtaaagctatacacacagggatgaactgtaagcagtaccaggacgatcttaac
gccagatcaaccaacgacaaagcggcaagccagactaagatcatgatcaagaagatgctt
gatgacggagaagccatgaactgcccgcagtgcaaggtgatagtgatgaagaaggagggc
tgtgattggattatgtgttccatctgtaaaacagagatctgctgggtcacaaagcaggcc
agatggggacccatgggtaatggtgacatatcaggaggctgcaagtgtcgagtgaatggt
gtaatgtgtcatcctaactgtaacaactgccactga
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