Mya arenaria (softshell): 128243148
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Entry
128243148 CDS
T09995
Name
(RefSeq) ATP-dependent DNA helicase Q4-like isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128243148
03400 DNA repair and recombination proteins [BR:
maea03400
]
128243148
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128243148
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
128243148
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
128243148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
128243148
NCBI-ProteinID:
XP_052816675
LinkDB
All DBs
Position
8:70810660..71018963
Genome browser
AA seq
1616 aa
AA seq
DB search
MEEVNKLKKELKVWETQFYKDHARKPSKSDIDTAPDTIKDAYSKYTKIKKILTGSVSSGP
QRDEREGKENQYTDQHTAQVTAKEGKGIEENTECGSGSDDAALGSGEDADQVGDEVDGET
VEVWGSQFNRYKWSRWKKVSAESLKGGEAGKGMGAQPAFLKNLGRNMFEQSLKMGSQQGV
KPWKKPDTPRRGPVSSVRGRHAPPTSKLVQDPVIEEQSDNSKDSKSKFDTTAESTTVDCE
PSFPSLFRKAATLTKQKFTKSDETNEPLFNKFQSTSRQNKSFLSGKLSQMVTKHRESMNF
DEGEDNEEVEETFPGVVHDIEEEEVDKNAVSHSWNMSVSRLISQDEDDERKRKNAEKRKK
VQEEKKKALEEKKKIMEEKKIAKGMVAKGKTADHKTDFGARKVGNCDADEKIKISRDKNE
EESLPAASIDGTEENKNENDRGKGVSKVKVQTKHNVEKEFIDDEMDADDLDYEPKHVTRI
RKGRAPVIEDSDEEGYDTKRDDSKIEMVKPAASSKQTASKPRRNTKKRVLESDDEIKDGD
ETLDASDEDNDAEVGKKRKKTVKSGAAAKRRKTNTAETTGRDDDRAAPVIIKKPAAKSTG
KAASNGNFIKLNMKIKTYKRKGHHQTGPQYKRMMWKQKMQARSKSRGDACFKCGQSGHWA
NKCPGAGASNAAAKYEREPVNDEDFPSLQEAVMLARGCKQPLKKKPTGAAQASGQVSLEK
NSSDSVAMDTSAMDQVATEEVAMEDEELEVESGITRTHREQVAAPPPTKPLLECGEGETL
PAVPEEVWRGLRKFGFDSFRPGQQEAVMRILCGLSTLVVLSTGGGKSLCYQLPAYLYAQR
APCITLVVSPLVSLMEDQVTGLPKGIQGVCLHTNMTKTQRENVIESVKSGKAQFLLVSPE
AIAGGSMSLLSVMSGLPPVGFVCIDEAHCLSEWSHNFRPSYLRLCKVLKDRLGVRCFLGL
TATATMSTACDVSRHLGISDFARATVRGSPIPSNLVLSVSCDPDRDQALTGLLKGERFGT
LDSIIIYCTRRDQTDKVATIIRTCMNTGVPTEKLIDKGRRRQRPTLEWSAESYHAGLTAA
ARKRVQNSFMGGKLRVVVATVAFGMGLDKSDVRGVIHYNMPKSFESYVQEIGRAGRDGER
AECHVFLDPEGRDLCELRRHTYANTIDYRTLKKLVQRVFPPCRCRDVHEIHAQAVREAEE
MSKMFDEDMDEEFESENPARIDCSTLETHSTKNSPAKEDGRTDKTSDTGETPAGENPYVN
SCHIGEDSQHGKQGNSNSDENGETIKLSDCDGPNGGESNSAGPRHKERLCPGHERALPIQ
QTVLDLDVKEEGISTLLCYLELHDGQWVENLSNVYANCRVQCYGGPAQLQAVSKKCPPIA
VAIARARRDGTSFTNTNSIEFSVIDVSDMMGWDSGPVKRELKLLLWNFDGGKPVRTGTMV
EFTDLAFHFRSPGDFTTDELDDILQFLHTRAQRQERSEIANLSSLYEALKGVSHKNYWMC
ADDVDMTRNDKLKGILNQYFDKQEHDAPDLDSLTTQPVPEFSEGQLISDIRCFCNLYGQE
HTLTGRAIARIFHGIASPCFPATTWGKVRRFWRSHLDVDFNALMKIATRESILFRT
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtgaataaactaaagaaagagctgaaagtgtgggaaacacaattctataaa
gaccacgcccgaaagccgagtaaaagtgatattgacacagcacctgacacaataaaagat
gcttactcaaagtacactaaaatcaagaaaatcctcactgggtcagtgagcagtggacca
cagcgagatgaaagagagggaaaagagaaccagtatactgaccaacacaccgcacaggtt
acggccaaggagggaaaaggcattgaggagaacacagagtgtggctcagggtcggacgat
gcggctctgggcagtggtgaagatgctgaccaggtgggagatgaggtagatggtgaaaca
gtcgaggtgtggggcagtcaatttaataggtataaatggagtcgatggaagaaagtctcc
gctgaaagtttgaaaggaggtgaagctggcaaaggaatgggtgcccagcctgcgttccta
aagaatcttgggcggaacatgtttgaacagtcccttaagatgggaagtcagcagggagtg
aaaccatggaagaagccagacactcccagacgaggcccagtatcctctgtacgagggaga
catgcccctcccaccagtaaactagtgcaggacccagttattgaagagcagtctgataat
tcaaaagactcaaaatcaaaattcgacaccacagctgagagtacaacggtcgattgtgaa
ccatcctttcctagtttgttcagaaaagcagcaactcttacaaagcagaaattcacaaag
tctgatgaaacaaatgaaccacttttcaacaaattccagtccacatcaagacaaaacaaa
agctttttgtctggaaagttgtcacaaatggtcactaaacatagagagagtatgaacttt
gatgaaggagaggacaatgaagaagtggaagaaacatttccaggtgttgttcatgatatt
gaggaggaagaagttgataaaaatgcagtgtctcactcatggaatatgtctgttagtaga
cttataagtcaggatgaagatgatgagagaaagagaaaaaatgctgagaaaagaaagaaa
gttcaggaagaaaagaagaaagctctcgaagaaaagaagaaaattatggaagagaaaaag
atagcaaaaggtatggtggctaagggtaagactgctgatcataaaacagactttggtgct
agaaaagtaggaaattgtgatgctgatgagaagatcaagatatcaagagataaaaatgag
gaggagagtttgccagcagcaagtattgatggcactgaagaaaataaaaatgaaaatgat
cgtggaaagggtgtaagcaaggtgaaggtacaaacaaaacataatgtagagaaagagttt
attgacgatgaaatggatgctgatgatcttgattacgagccaaaacatgttactagaata
aggaaaggcagggctccagttatagaagattctgatgaagaaggttacgatactaaacgt
gatgactctaaaatagaaatggtaaaacctgcagcatcaagcaaacagacagcgtctaaa
ccaaggagaaatacaaagaaaagagtgttagaaagtgatgatgaaattaaagatggagat
gaaactttggatgcttctgatgaggacaatgatgcagaagtagggaagaagagaaagaaa
actgtcaagtctggagcagccgcaaaacggaggaaaaccaacacagcagagacaacgggg
agagatgatgatcgtgctgcacctgtgatcattaaaaagccagctgccaagtccacagga
aaggcagcatcgaatggtaacttcattaagttgaacatgaagataaagacgtacaagcgg
aaaggtcatcaccaaacgggcccgcagtacaagcgtatgatgtggaaacagaagatgcag
gcccgcagcaagagtcgcggagatgcatgctttaagtgtggtcagagtggccactgggcc
aacaaatgtcctggagcaggagcatctaatgctgcagccaagtatgagcgcgagccggtg
aatgatgaggactttcccagcctccaggaggctgtcatgttggcccgtgggtgtaaacaa
ccattgaagaaaaaacccacaggtgctgcccaagctagtggtcaggtgtccttggagaag
aactccagtgattcagttgctatggatacatctgctatggaccaggttgctaccgaggaa
gttgctatggaggatgaggaactggaggtggagtcaggaatcacaaggacccaccgggag
caagttgctgccccacccccaacaaaacctctgttggagtgtggggagggggagactctt
ccagctgttcctgaagaggtgtggcgtggcttgcgcaagtttgggtttgacagtttcagg
cctggacagcaggaggcagtaatgagaatcctctgtggtttgtcaactctggtggtgttg
tctacgggaggtgggaagtctctgtgttaccagctgccagcctacctgtacgcccagagg
gctccctgtatcaccttagttgtctcccctcttgtgtcccttatggaagaccaggtgaca
gggcttcccaagggaatccagggtgtatgtctgcacacgaacatgacaaaaacccagcga
gaaaacgtcattgaatctgttaagtctgggaaagcccagttcctgcttgtctcccctgag
gcgatagcaggcggaagcatgtcactattgtcagtcatgagcgggctgcctccagtgggg
tttgtgtgtattgatgaagcccactgcctgtccgagtggtcccataacttccgaccctcg
taccttagactctgtaaggtgttaaaggatcgccttggagttcgatgtttccttggtcta
acagcgacggccaccatgtctacagcatgtgacgttagtcgtcaccttgggatcagcgac
tttgcccgggcaactgttagaggctcacccattccctctaaccttgtcctctcagtgtcc
tgtgatcctgacagagatcaggctttgacggggttgttaaagggtgaaagatttggcacc
ttggattccatcatcatttattgtacacgtcgtgaccagacggacaaagttgccacaata
atcaggacatgtatgaacacaggcgtacctacagagaagctaattgacaaaggaagacga
cgtcagcgtcccacacttgagtggagtgcagagagctaccacgctgggctcactgctgct
gccaggaaacgtgtacaaaattctttcatgggcgggaaacttcgcgttgtagttgccact
gtggcgttcggtatggggctcgacaagtctgatgtccgaggagtgatccattacaatatg
ccaaagtcattcgagagctacgtgcaggagataggccgcgcaggaagggatggagaaagg
gctgagtgccatgtcttcctggaccctgagggtcgggacctgtgtgaacttcggagacat
acttatgccaacacgatcgactaccgcaccctgaagaaactggtacagcgggttttcccg
ccctgcaggtgtagagatgttcatgagatacatgcccaggcggtccgagaggctgaagaa
atgtccaaaatgtttgatgaagacatggatgaggagtttgaatctgaaaatcctgcaagg
atagactgttctacactagaaacacattcaactaaaaatagtcctgctaaggaggatgga
agaacagacaaaactagtgacactggagaaactcctgcgggtgaaaatccttatgttaac
agctgtcatatcggtgaagatagtcaacatggtaagcaaggtaacagcaacagcgatgaa
aatggggagaccataaagttgagtgactgtgatggtccaaatggtggtgagtccaattcc
gcaggtcccagacataaggagaggttgtgtcctggacatgaaagggccctgcctattcaa
caaaccgtcttggatttggatgtcaaagaggaaggcatatcgacattactatgttacctg
gagttacatgacggccagtgggttgagaacttgtcaaatgtgtacgccaattgccgtgta
cagtgctatggagggccagcccagctgcaggcagtatctaaaaagtgtcccccaatcgcg
gtcgccattgccagggcaagacgggatgggacaagctttaccaacaccaacagtatagag
ttctccgttattgatgttagcgacatgatgggatgggacagcggccctgtcaagagagaa
ctaaaactactcctgtggaattttgatggaggcaagccagttaggacaggtacaatggtg
gaatttacagacctagccttccacttccgatccccgggggatttcactactgatgaactg
gatgacatcttgcagttccttcatacaagggctcagcgccaagagagatctgagatagct
aatctctccagtctctatgaggcactgaaaggagtgtcacataagaactactggatgtgt
gctgatgacgtggatatgacgcgtaatgacaaactcaagggaattctgaaccagtatttt
gacaaacaggaacatgatgctccagatctggacagtctaactacccaaccagtaccagag
ttcagtgagggtcagcttatatcagacatccgttgcttctgcaacttatacggacaagag
catacactgacagggcgagctatagcccggatatttcacgggatcgccagtccttgtttt
cccgccacaacttggggcaaggtccggcggttctggagaagccatctcgatgtagacttt
aatgcactcatgaaaatagctacaagggaatcaattctgtttagaacgtga
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