Mya arenaria (softshell): 128243212
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Entry
128243212 CDS
T09995
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
maea
Mya arenaria (softshell)
Pathway
maea03430
Mismatch repair
maea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128243212
03460 Fanconi anemia pathway
128243212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128243212
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128243212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
128243212
NCBI-ProteinID:
XP_052816782
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All DBs
Position
2:complement(13362536..13384024)
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AA seq
925 aa
AA seq
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MDETDGCEPDLAHPKASNICAIDKKSVHRICSGQVVLTLATAVKELLENSIDAGATIVDI
KLKDYGSEQIEVSDNGSGVQECNFQGLTLKHHTSKLQDFTDLMNVETFGFRGEALSSLCA
LSTLNVTTRHKSASVGTRMEFDHNGKITKQTSMARQIGTTVTLQNLFYTLPVRHKEFQRN
VKKEFIKMVQVLNSYCIISTGVRITCTNQTAKGNRSVVVASKGNTAMSENISNVFGPKQM
SGLEEFVQKCPEEETCQEFGIKQGADNIFRVEGYVSKCEHGLGRSSTDRQFFFINGRPFD
SIKLSKVVNEVYHQYNRHQYPFVVFKISTQKDNVDVNVTPDKRQVFMDGEKHILATVKCS
LVAMYEPSTSILRMQQPAGIPSQLKSPLPESVDHIGLSRHQSLEKPSGLSSLQKLKRSFS
SAFSKGDNSPQASPRSGTQPSKQRKLDAFVSSWSPAKRNKDTSLHKLSSPSKDIAGEGKN
FEFVEERIHERSESFIIDKNCDSDRDTMNEMTENIDNCKRLSSEYQLINCDESKKDCSII
EETRKHLNTDTQKECDTTESCSSQSIKIVHHGVNSQAVEVSECKSNQQSIDADSDHHESL
YHYQTSECSSLSEKISSERDSTPQQYEESLTNIDKHEAAYKNQSEFDEGHENMKTEEIPK
IDCTVDACHIVDSEEDFKKAEKPIQFSMENLRDRWRRKAKNKEDGNKFSRAFRATINPAE
NSTAEQELQREIKKDMFSQMEILGQFNLGFIIAKFERDLFIVDQHATDEKYNFETLQRDY
VIQSQKLICPMNLELTASNETILMDNLDVFRKNGFEFQIDENGPPMQRVKLASTPVSKNW
NFGKEDIEEMIFMLTDSPGVLCRPSRVRAMFASRSCRKSVMIGTYLNKPEMKKLLSHMGE
IDQPWNCPHGRPTMRHLINLDMLPT
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggatgagacagatggatgtgaaccagacctagctcatccaaaggccagcaatatttgt
gctattgacaagaaatctgtacacaggatttgttcggggcaagttgtgctgacgttggca
actgctgtcaaggagctgctggaaaacagtattgatgctggggcaacaattgttgacatc
aagctcaaagactatggcagtgaacagattgaggtttctgacaatggctctggcgtacag
gaatgtaactttcaaggactcacattgaagcatcacacatcgaaactgcaagactttaca
gacctcatgaatgtggagaccttcgggtttagaggagaagccttaagctcgttatgtgct
ctaagtaccctcaatgtaacaacaagacacaagtcagccagtgttggtacaagaatggag
tttgaccacaatggcaagataacaaagcaaacatccatggctcgacagattggaaccact
gtcacactacagaacctgttctacacacttcctgtacgacacaaggagtttcagcggaat
gtaaagaaggaatttatcaagatggtccaggtccttaactcgtactgcatcatcagcact
ggtgtccgcatcacgtgcaccaaccagacagctaaaggtaataggtctgttgttgtagca
agtaagggtaacactgcaatgagtgaaaacatctcaaatgtattcggtccgaaacagatg
tccggtctagaagagtttgtacagaagtgtcctgaagaagaaacatgccaggagtttggt
attaaacaaggagcagacaatatcttcagggtagaaggctatgtgtccaagtgtgagcat
ggtttaggacgaagcagtacagaccgacagttctttttcatcaatggcaggccatttgat
tcaatcaagctgagtaaggtcgtgaatgaagtgtaccaccagtacaacagacaccagtac
ccatttgtggtcttcaaaatctcaacacagaaagacaatgtggatgtaaatgtgaccccg
gataagagacaggtcttcatggatggggagaaacatattctcgccacagtcaagtgttca
ttggtagctatgtatgaacccagcacgtccatactccgaatgcaacagccagctggaata
ccatctcagcttaaatctcctttgccagaatctgttgaccatatagggctgtcaagacac
cagagtctggaaaagccaagcggtctttcctccctgcaaaagttgaaaaggtcgttcagt
agtgcgttttccaagggggataactcccctcaggcctcccctcgcagtggaacacagccc
agtaaacagaggaagctggatgcctttgtttcatcatggagtccagcaaagagaaataaa
gacacttcactgcacaaactctcttctccatcaaaagacattgcaggggagggtaagaac
tttgaatttgtagaggaaagaattcatgagagatctgagagttttatcattgacaagaat
tgtgatagtgacagagacactatgaatgaaatgacggaaaatattgacaattgtaagcgt
ttgtcttcagaatatcagttaataaattgcgatgagagtaaaaaagattgcagtattatt
gaagaaactcgtaaacatcttaatactgatacacaaaaagaatgtgatacaacagaatcg
tgttccagtcaatcaattaaaatagttcatcacggtgtcaactctcaggcagttgaggtt
agtgagtgtaaatcaaaccaacaaagtatcgatgctgattcagaccaccatgaaagtctt
tatcattaccagacatcagagtgctcatcactcagtgaaaaaatcagctcagaaagagac
agtacaccccaacagtatgaagagagtttaaccaacattgataaacatgaagctgcatac
aaaaatcagtcagagtttgatgaagggcatgaaaacatgaagacagaggagattccaaaa
atcgactgcactgtggatgcctgccatattgttgactccgaggaagattttaaaaaggca
gaaaagccaatccagttttctatggaaaacctaagggacagatggagaagaaaagcaaaa
aacaaagaagatggtaacaagttttctagagcttttcgtgcaaccatcaacccagccgaa
aacagtactgctgagcaggaattgcagagagaaatcaaaaaagacatgttctctcagatg
gagatcctagggcagtttaatcttggcttcatcattgccaagtttgagcgagatctgttc
attgttgaccagcatgctacagatgagaagtacaactttgagacattgcagagggactat
gttatacaaagccagaaactcatatgccctatgaatctagaactgacagcaagcaatgaa
acgatactaatggacaaccttgatgtgttcagaaagaatggctttgagttccaaatagat
gaaaatggtcctccgatgcagcgagtaaagctggcgtctacccccgttagcaagaactgg
aattttggaaaggaggatatagaggagatgatctttatgctgacagactcccctggtgtt
ttgtgtcgaccatccagagtgcgagccatgtttgcctctcgttcgtgccggaagtctgtc
atgattggaacctacctcaacaagccagaaatgaaaaagctgttgtctcatatgggagaa
atagatcaaccatggaactgcccccatggtagaccaacgatgagacatttaatcaaccta
gacatgcttcctacttga
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