Mya arenaria (softshell): 128243246
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Entry
128243246 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128243246
KO
K23195
transcriptional repressor CTCF
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128243246
03036 Chromosome and associated proteins [BR:
maea03036
]
128243246
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128243246
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128243246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
BolA
zf-C2H2_15
zf-C2H2_ZN142
Drc1-Sld2
Zn_ribbon_PriA
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
128243246
NCBI-ProteinID:
XP_052816831
LinkDB
All DBs
Position
8:complement(3567946..3585721)
Genome browser
AA seq
960 aa
AA seq
DB search
MEEDMAPGDLHVGARSVVTLVESPTMDSVPQNLNDLQSYLVNFNKEIEGNGEPGTGFPSC
INKMMTSATNSVFVPVSSEVSTPDEDISDMTVIKGKTLCEDGSLSVSMGTADITLCGDDV
GGEQLMFVEQAGGESMEAEDSKDSGLSFHDQVVSDEAPIDGLGDRIQLQELNLEQLGLQQ
GFSLPDGMVMLPMGDMSSFLAPQTDSRLVQIVTVNGQPTLQLVSPTSLLQQQTNTVLEGD
SSQELNLLSGGTVASSGLSSPSLVSMVTSSAGGAATTLQTLQFKQDMSSPQLVALQNPDD
SSESPVMALNLENLVQVGSMASSQSHQTMDTETLTQQTAAGYHSVALLPTGSGDQTGDVR
YVLIVNPGAGGQGAGDKLQPPSPNPKVGVSEGRAVGMRKPGRQGQVDSLLKGQGAESLLN
DGEELTCHICNYTSPQRYLLRRHMKTHLGERQHKCGLCYRAFKTLASLQNHINTHTGVRP
HKCKMCESAFVTSGELVRHIRYKHTFEKPHKCTICEYASVELSKLKRHMRSHTGERPYAC
SHCNYASPDTYKLKRHMRIHTGEKPYTCEICSSKFTQSNSLKAHRLIHSGNKPVFQCSVC
PATCGRKNDLKVHMMKLHGSNEQPLVCKKCPMEFWDRYSFKIHLKAHEGDKCYKCPECEY
TASSQRQVDVHMLTVSHSSFKPFECDDCEIAYRQKQALKKHRHIYHDLINTEEIGSEDEC
KECEKMVRKNEYTEMNDSDNDDTTDKSQNVHTCGGFSKHLLNSLAPLTADQLIENSLLAD
MKEGKLGNSPKVVVVHPDGRVEEVTAKLQSLSQSKPMDDFLVSLGVTGDSHFDQVSSLPS
DVSVAEVQGLMAGSHSGLTATHITSHEEDSCELTAVKADEPSHTLQVEDLSTNDQTREES
SQACFDHQNTVATGIHITQQEEDSDVDVEADSTDSIQVVELDDTGLAHVVINVPISQPFS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatatggcgcctggtgatctacatgttggggctcggtcagtggtcaccctt
gtggagagcccaaccatggattccgtgcctcagaacctcaatgacctacagagctacctg
gtgaacttcaacaaggagatagaggggaatggtgaacctggcactggattcccttcctgt
atcaacaagatgatgacttctgcaacaaactctgtttttgtaccagtgtcttctgaggta
tcaactccagatgaggacatatccgacatgacagtgatcaagggcaagactctctgtgag
gatggctcgctgtctgtttccatgggaactgctgacattaccctctgtggggatgatgtg
ggtggggaacagctgatgtttgtggagcaggcgggtggggaaagtatggaggcagaggac
agcaaggactctggactgtcattccatgaccaggttgtgtcagacgaggcccctatagat
ggacttggggacagaatacagctgcaggagttgaacctggaacagttaggtctacagcag
ggcttctcgctaccagatgggatggtaatgttgccgatgggagatatgagcagtttcctc
gctccccagactgactctcgactggttcagattgtgactgtaaacggccaacccacactc
cagcttgtctcaccaactagtctgctacaacaacagacaaacacagtgttagagggtgac
agcagtcaggagttgaacctgttgtcgggaggaacggtggccagcagtggcctctcctcc
ccctcccttgtctccatggtaaccagctcggccggaggggctgccaccactctacaaaca
ctacagttcaaacaggacatgtcaagcccccagcttgtggccctgcagaaccctgatgac
agctctgagtcccctgtaatggccctgaatcttgagaacctggtgcaagtgggttctatg
gcatccagtcaatcccatcaaaccatggacactgagacactcacccaacagacagcagct
gggtaccattcagtagcactgcttccaactgggagtggggaccagacaggtgatgtaaga
tatgttctgattgtgaacccaggggcaggcggacagggggctggggacaagctgcagccc
ccctcccccaaccccaaggtgggtgtgtcggaaggtagggcagtgggaatgagaaagcct
gggcgacagggacaagtcgacagtctgctgaagggacaaggcgcagagagcctgctcaat
gatggagaggaactcacctgtcatatctgtaactacaccagtccacagaggtacctgtta
cgtcggcacatgaaaacccatcttggtgagcggcagcacaagtgtggtctgtgttatcgg
gccttcaagaccctcgcctccctacaaaaccacatcaacacccacaccggggtacgacca
cacaagtgtaaaatgtgcgagtcagcatttgtcacatccggggagctcgttaggcatatc
aggtacaagcatacatttgagaagccccataaatgtaccatctgtgagtacgccagtgtg
gaactcagcaaactgaagagacacatgcgttcccacactggggagcgtccatacgcctgt
tcccactgcaactacgcctcaccagacacatacaagctcaagcgacacatgaggatccac
accggtgaaaaaccatacacttgtgagatatgtagctccaagtttacccagagtaacagt
cttaaagcacacaggctgattcacagtggaaacaagccggtattccagtgttcggtatgt
ccagcgacctgtggtcgaaaaaatgacttgaaggttcatatgatgaaactgcatggttca
aatgaacaacctctggtctgtaagaaatgtccaatggagttctgggaccggtattccttt
aaaattcatttgaaagcccatgaaggggacaagtgttacaagtgtccggagtgtgaatat
acagcctcctcccagcgtcaagtagatgtccacatgctcactgtttcccactcctctttc
aagccattcgagtgtgatgactgtgagattgcttaccggcagaaacaggcgctgaaaaag
cataggcacatctaccatgacctgattaacacggaggagataggatctgaagatgaatgt
aaggagtgtgaaaaaatggtgagaaaaaatgagtacacagaaatgaatgactctgataat
gatgacactacagataaatcccaaaatgttcacacatgcggaggattttccaaacatctt
ctaaactcgctggccccactgactgcagaccagctgatcgagaactctctcctcgcggac
atgaaggagggaaagcttggtaactcccctaaggtggtggttgttcaccctgacggccgg
gtggaagaggtcacagctaaactccagagtctcagccaatcaaaacctatggatgacttc
ctcgtgtctctgggtgttacaggagactctcactttgaccaagtatcgagtctgccgtca
gacgtgagtgtagcggaggtgcagggtctcatggctggctcacatagtggtttgacagcc
acacacatcacttctcatgaagaggacagctgtgagttgacagctgtgaaggctgatgag
cccagccatactctccaggtagaagatctgtctacaaatgaccagacccgtgaagaaagt
tcccaggcatgttttgaccaccagaacacagtggctacagggatacacatcactcaacag
gaagaggactcagatgtagatgtggaggccgacagcacagatagtatccaagttgtagaa
ctagacgacactggattagcacatgttgtgatcaatgtcccgatatctcagcctttttcc
tag
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integrated database retrieval system
