Mya arenaria (softshell): 128243296
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Entry
128243296 CDS
T09995
Name
(RefSeq) low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128243296
Membrane trafficking [BR:
maea04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128243296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
128243296
NCBI-ProteinID:
XP_052816939
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All DBs
Position
8:complement(38718853..38735440)
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AA seq
905 aa
AA seq
DB search
MPFIVILTVWVLTVGAVISESTDLHCDGDRIVELQEDHGLISSTQANLTNTHLCQLWRIQ
APYGSSITIRIQHFFGKSACESGYNLYLGPMPEYFVCNQSAGFDHTSTPILYQSIRDHVW
VRYTRDNKTDHIAPSFNLEFVTSESEKCQYRCSDGACYMEAWRCNYIAECRDMEDELNCD
LPYSTATEKPVGGLFNVISPQTLPPQHGYQVCVKCFILKIQRYTCVPTAMLCDGNIDCIN
EADEHNNCDHQCGYGEIYCYQPGLRKYSCLHNTLKCDGHADCKHQEDEDPSICSSSLCNR
RLEERIGWFSSPHFPDRYLPNSNCSWVIHQLGAPMSSKIQLRKVMFDLDMSDHTSVTIYD
GPDFTYDEIGTFTSQVPPPAVIVSTSSWLNIVFKSGNLPLLAKGFNFTYQMKGTCLPTQH
ECFGESECYDQAHQHCNGVWDCPLKGSDELDCDTCKPDYYFCGIISQCYHPSERCNGIAK
CQNYADENNCSPTQCGSQNGTFLCRNGRCIYQNWTCDHHDDCGDGSDEEECPRVVTTKRV
IIAAICGSMICALLLVILVGCSCKLYSLRAIDISPHHRIENPMGRLYAELVRRRAPPPYH
EAMLTSRNFDEVQQEYLDQLRNSSRRSRRSGRGNRRRSRNQPTRDNPDAGLVDQNDADSN
NNGDRNGNHIIHENGPQLIVIDEENLNENNIDVTDSSSTTHLLPSESESDSSDTENDLDV
DNGIQGQGYSAEGHEMVEMNDTNAAVDDDDENILVSERLSAQWERVSESEEESDDVCILG
DPLHRNELDRGLRHQSHCDNASLDTDASASITSGENQDGSPTDLMVKDSSDDDDDDSSDS
DNDDHDNSRNSTPKPDTRHTNPLISVPSGSMLMRNISRNSLDSIGSETFSENDVPMQPMD
QTSHS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgccttttattgtcattttgacagtatgggtgttgacagttggtgctgttatatcagaa
tctacagatctacattgtgatggggataggattgtagagctacaggaagaccatgggctt
atcagttcaacacaagctaacctcaccaacacccatctctgccagctgtggagaatacag
gcaccatatggaagcagtattactataaggattcaacacttctttgggaagagcgcctgc
gagtctggctacaacctttacctaggaccaatgccagagtactttgtgtgtaaccagtct
gcagggtttgaccacactagcactccaatcttgtaccagtctatccgtgatcatgtctgg
gtccggtatacaagggacaacaagactgaccatattgctccatcctttaacttggaattt
gtcacaagtgagagtgagaagtgtcagtaccgatgttcagacggtgcatgctacatggag
gcctggaggtgtaactacatcgcagagtgcagggacatggaagatgagctcaattgtgac
ctgccttattccacagccacagagaagcctgttggtgggcttttcaatgttattagtcca
cagaccctgcctccccagcatggctaccaggtgtgtgtgaagtgttttatcttaaagatc
caacgttacacatgcgtccccacggccatgttgtgtgatggaaatattgactgcatcaac
gaggccgatgaacacaacaactgtgatcaccagtgtggttatggggagatctactgttac
caaccaggactacgaaaatacagctgtcttcacaacacactaaaatgtgatgggcacgca
gactgtaaacaccaggaggatgaagaccctagtatctgctcatcaagcttgtgtaaccgt
cgtctagaggaaagaatcggctggttttcctcccctcactttccagatcgatatctgccc
aactccaactgctcatgggtcatccaccagctgggagctccaatgagctctaaaatccag
ttgcgaaaagtgatgtttgaccttgacatgtctgaccacacatcagtgactatctacgat
gggccggactttacctacgatgagataggaacgttcacaagccaggttcccccacccgct
gtcatcgttagcacatcctcatggcttaacattgtgttcaaatctggaaaccttccatta
ctcgccaaaggatttaatttcacctatcagatgaaagggacatgcctgccaacccagcac
gaatgtttcggggaaagtgagtgttacgaccaggcccaccaacattgtaatggcgtgtgg
gactgtcctctcaagggttctgatgaactggactgtgacacatgcaaacctgattattat
ttctgtggaatcatcagtcagtgctaccacccctctgaaagatgtaacggaatagccaag
tgccaaaactatgcggatgaaaacaactgttctccaacccagtgtggtagtcagaatggc
acgttcctgtgccggaatggtcgatgtatctaccagaactggacatgtgatcaccatgat
gactgcggagatggcagcgatgaagaggagtgtccgcgtgtggtaacaaccaagcgggtg
ataattgcagccatctgtgggtccatgatctgtgcactgttactagtgatcctagtgggc
tgttcctgcaagctgtactctctccgagccattgacatctccccccatcacaggatagaa
aatcccatgggacgactatacgccgagcttgtgagacgacgtgccccacctccctaccat
gaggcaatgttgacctcaaggaattttgacgaggtgcaacaagaatatttagatcagctg
agaaattctagtagaagatccagacgaagtggtagaggaaatagaagaaggtctaggaac
cagccaactagagataatccagatgctggcttagtggaccaaaatgatgcagatagcaat
aacaatggggatagaaatggcaaccatattattcatgaaaatggcccacagctgattgtg
attgatgaggaaaatctgaatgagaataatatagatgttacagactcttcgtctacaact
cacttactgccctctgaaagtgaatctgactcatctgacactgaaaatgaccttgatgtt
gataacggtattcaaggtcaaggttactctgctgaagggcatgaaatggtggaaatgaat
gacacaaatgctgctgttgatgatgacgatgagaatattttagtgagtgagaggttatca
gcacagtgggagagagtgagtgagagtgaggaagaatcagatgatgtttgtatacttgga
gatcctttacatagaaatgaacttgacaggggtctaaggcaccaaagtcactgtgataat
gccagtttagacactgatgctagtgcttccataacgagtggggaaaaccaagatggctca
ccgacagacctgatggtgaaagacagcagtgatgatgatgacgatgattcctcggactct
gataatgatgaccatgacaattccaggaattcgactcctaaaccagacactcgtcacaca
aatccccttatatctgtcccttctggatcaatgctgatgaggaatatctcacgcaactcc
ttggattccattggttccgagacattcagtgaaaatgatgtccctatgcagccaatggac
caaacttctcactcttag
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