Mya arenaria (softshell): 128243394
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Entry
128243394 CDS
T09995
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128243394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128243394
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128243394
mRNA degradation factors
5'-3' decay
Decapping complex
128243394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
128243394
NCBI-ProteinID:
XP_052817112
LinkDB
All DBs
Position
8:complement(17790715..17814283)
Genome browser
AA seq
1449 aa
AA seq
DB search
MDDTKSPTSSMESTGDTSRLLKELIDLQKSSASSMASIDRSINVQESHEVLQTISGMAQT
SGDGTDPTLTELMKTMYDGNSARQLITLQGTDTANSFSVFGQEVDIVSSKQLNKSQSLAG
STGSNKVKITPVVNYDWENRRYVGNLVAVHRGNIFVAYVLKGKTGGVVRITNRKTAERHL
LKDFVGRVIDLAFAHTDDVMLAVVDEIGNLCVYEIHQADDRKISSTRMLHVQRPQTSLVS
EYHRVIWCPYIPDEVDETATSDCSTPDSASRMLVLTNDQQAEIWSVDMVTREYGDGPMFP
QDVEIGLITIDSHSKPITDAAFSPDGTALATASLDGEVMFFQVHMYSQDMTSPRCLHQWK
PHNGKPMSCLFFLDDHKNCSPDALFWKFAVTGADNNQEIKIWSCDSWNCLQTIRFLSPPG
VPSNFTYEPCMKASLDMSARFLILSDIRKNVLYVLQIHHAGDQSSVHVSSVSEFTLAQPC
LSFAILDAGTKRFKISKGDDSHLDEITTGDIVPDDGEEDEKRSDTGASSLGVQIKLYTVH
PKALQELLIRFKPESSAPVPPAPSVSSVSQSEAGVVDGLSDMSMSVDGSGEHDKSDSFST
PLAESTHTGQHILLTPDAFVSSSPRKLQAAVYTDESILDNSTAKSSTSSFTQVSAMNDDF
LSPRSSSNSTITQTPTTPKAENLSPGLGLAIEVTPSSVPLPPITSIEETDLATPTSSGSR
DLRVGDATPTPEETQEVDNFFQQSGERKRDLQMVSLDSTESTGMFEAVASGVSSVEVSRV
KKSQSSYDENDEEVADVLGDDTIGDSTPMGTQPFDGFQDGSQLGESGESSIRAWPKPPKM
SKGESDPALQAGQGDSHISLDEGDDNEADEDEEEEENEDNDEDDGDDGGEDDADVVVEEE
ETEGEAQEEEEEIVEEIEEEQEPSDESLDSKRGPMPAPVAGAGFSQSPREPRPVEVREIH
KETVREVLDTKEMKKLHTGLECVLQAMERQQQQLDLLRRDITEQQDNFLELQRRQHEQEQ
LRTVPDGNQPSIEEHLGKLENIVTSRVERLFNQHSQKEAQRVQDILRQSDARDERKHERL
CSSVTQTISASVNTQLDKLVRSQLVPNMTKVLEPIKEQMHHDMAQKLTATDSLLKDNIAK
MVRSRPTVEAMGVAAGNAIQAPIQAAYREAFQNFVIPTFERTTQNMYQQVSETFQRGTKE
YTRQLESHLEGVRQRHQEGRDPVVMEMRRLSDSFQASAEQMQAHVLASIQTQLSSEISKT
MTRLQESLGEHVHAAVREEVGKAMKEQGSTISDNVLLAMRSGAVTPARVTPDPQIEKTHI
LNLLRQGQLNAAFQQALSAANLELVIALCEAVNPNQVFNQSPCPLQQPVLLSLIQQLSAD
LENHTELKHKYLEEAVMNLDIHDSITQEHMRGVLLSLNQKLRVYIPAHPNLKITRSLRML
LMASESLIK
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacgaaatctcctacttcatcgatggagtcgaccggggatacaagtcggctc
ttgaaagagctgatagatctccagaaatcaagtgcttcatctatggccagtatagacaga
tccataaatgtacaagaaagccatgaagtactgcagaccatttctggaatggcgcaaaca
tcgggtgatgggacagaccccaccctcacagagctcatgaagaccatgtatgatggaaac
tcggccaggcaactcatcactctccaaggcacagacacagcgaacagtttcagtgtgttt
gggcaggaagtggatatcgtctccagcaagcagctcaacaagtcccagtcactggccgga
tccactggatctaacaaggtgaagatcactccagtggtaaactatgattgggagaacagg
cgctatgttgggaaccttgtcgcagttcacaggggcaatatctttgttgcttatgtgttg
aaaggcaagacaggaggcgttgtcaggatcaccaacaggaagaccgctgaacgccacctt
ctcaaggactttgtgggccgagtgatagaccttgcttttgcccacacagacgatgtcatg
ttggccgtggtggatgaaataggcaacctgtgtgtgtacgagatacaccaggctgatgac
aggaaaatatcttcaactcgaatgctgcatgtgcagcgtccccagacgtcgttagtaagt
gagtaccatcgcgtgatctggtgtccgtacatccccgatgaggtggatgaaactgccaca
tctgactgcagcacgccagactccgccagtcgtatgctggttctcaccaatgaccagcag
gctgagatctggagtgtggatatggtcacccgtgagtacggtgatggaccgatgttccca
caagatgtcgagattggccttatcaccatcgactcacattcaaagccaatcacagatgca
gccttctccccagatggtacagcactggccactgccagcctggatggagaggtgatgttc
ttccaggtgcacatgtactcacaggacatgacttcacctaggtgccttcaccagtggaag
ccccacaacgggaagcccatgtcctgcctcttcttcctggacgaccacaaaaactgcagc
ccagatgcacttttctggaagtttgcggtgacgggggcagacaacaaccaggagattaag
atctggagctgtgactcctggaattgtctacagaccatcaggttcttaagccctcctggt
gtgccgtctaacttcacgtacgagccgtgtatgaaggcatcactagacatgagtgcaaga
ttccttattctgtctgacatcaggaagaatgtgttgtatgtgttgcaaattcaccatgcc
ggtgaccagtctagcgtgcacgtaagctccgtgtcagagttcacccttgcccaaccgtgt
ctctcattcgcaatccttgatgcgggcaccaaaaggttcaagatatccaagggggatgac
tctcatttggatgagatcactacaggtgacatagtgccagacgatggtgaggaggatgag
aagaggtcggacacgggggcatccagtctcggggtgcagataaagttgtacactgtacac
ccaaaggcactgcaggagttgcttatccggttcaagccagagtcatcggctcctgtccct
cccgcaccatcagtgagctccgtatcccaaagtgaagctggtgtggtggatggactgtcc
gatatgagtatgagtgtggatggcagcggggagcacgacaagagcgactcgttctccact
ccacttgccgagtccacccacactggtcagcacatcctgttgactcctgatgcatttgta
tcctcgagtccaagaaaactgcaggcagctgtctacacagatgagagcattctagataat
agtaccgcgaagagcagcaccagtagctttacacaagtgtctgccatgaacgatgacttc
ctgtcccctcggagcagctccaacagcactatcacgcagacacccaccacccccaaagca
gagaacctttcccctgggttggggttggccattgaggtgaccccctcctcggtaccccta
ccccctattacctctattgaggaaacagacttggccacgcccacttcctctgggagtcgg
gacctgagagttggggatgcaaccccaacccctgaggagacccaagaggtggataacttc
tttcagcagagtggggaaagaaaaagagatttgcagatggtatcactggacagcacagag
agtacggggatgtttgaggcagtggctagtggtgtgagctcggtggaggtgtcacgtgta
aagaagtcacagagctcctatgatgagaatgacgaagaggtagcggatgttctcggggat
gatactataggagattccactcccatgggcacacagccatttgatgggtttcaggatggt
agtcagctgggggagagtggggagtccagcatccgagcttggccgaaaccacccaagatg
agcaagggcgagtcagacccagcccttcaggcggggcagggagacagccacatttccttg
gacgaaggagatgacaatgaagcagatgaagatgaggaggaggaggagaatgaggacaat
gatgaagacgatggtgatgatggaggagaggacgatgctgatgttgttgtggaggaggag
gagacagagggagaggcacaggaagaggaggaggagattgttgaagaaatagaagaagag
caggaaccatctgatgagagccttgacagcaagagaggtcccatgcctgcacccgtagct
ggtgctggatttagtcaatctccaagggagccccgaccagttgaagtgagagaaattcat
aaagaaaccgtccgagaagtcctggatacaaaggaaatgaaaaagctgcacacaggcctc
gagtgtgtgttacaggccatggagaggcagcagcagcagctggacctgcttcgacgggat
atcacagaacaacaagacaacttcctagagcttcaaagacgtcaacatgagcaggaacag
ttgaggacagtaccagatgggaaccagccaagtattgaagagcaccttgggaaactggaa
aacattgttacctccagagtggagaggctctttaatcagcactctcaaaaagaagcccag
agagtacaggacatactaagacagtcagacgcacgtgatgagcggaaacatgaacgtctg
tgcagctcagtcacacagaccatatcagcttctgtcaacacacaactcgacaaactggtc
cgcagtcaacttgttcctaacatgacaaaagtgttagagccaattaaagaacagatgcac
cacgacatggcccagaaactaactgctaccgattcccttctgaaagacaacattgccaag
atggtcaggtccaggcccacagtggaggccatgggtgtggctgcgggtaatgcaatacaa
gcaccgatccaggctgcatacagggaagcatttcagaactttgtgattcccactttcgag
cgaaccacacagaatatgtaccagcaagtctctgaaacattccagcgaggaacaaaggag
tacactcgacagctggagtctcacctggagggcgtacgtcagcgtcaccaggaggggcgt
gacccggtcgtcatggagatgagaaggctctcagatagcttccaggcatcagccgaacag
atgcaggctcatgtgcttgcttccatacagacacagctcagctcagagatcagcaaaaca
atgaccaggttacaagaatctctaggagagcatgtacatgcagcagtacgggaggaggtc
ggcaaggcaatgaaggaacaaggaagcacaatcagtgacaacgttcttcttgccatgagg
tcaggggccgtaactccggcgagagtcacgccagacccccagatagagaaaactcatatt
cttaacttattgaggcagggccagttgaatgcagctttccaacaggcattgtcagctgcc
aatcttgagctggttatagccctgtgtgaagcagtcaacccaaatcaggtgttcaaccag
tcaccctgccctcttcagcagcctgtcctcctctccctcatacaacagctctcggctgac
ctggagaaccacacagaactcaaacacaaatacctagaggaggcggtcatgaatcttgac
atccacgactccatcacacaggaacatatgaggggggtgctgttatcgctcaaccagaaa
ctccgtgtctacatcccagcccaccccaacctcaaaatcacaagatcactccgtatgctc
cttatggcgtcagagtccctcatcaagtag
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integrated database retrieval system
