Mya arenaria (softshell): 128243513
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Entry
128243513 CDS
T09995
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128243513
03016 Transfer RNA biogenesis [BR:
maea03016
]
128243513
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128243513
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128243513
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
128243513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Cas3-like_C_2
CMS1
DIMCO_N
Motif
Other DBs
NCBI-GeneID:
128243513
NCBI-ProteinID:
XP_052817282
LinkDB
All DBs
Position
8:complement(4683756..4741598)
Genome browser
AA seq
730 aa
AA seq
DB search
MTAFEEMGVMREIARAVEDMDWSLPTDVQSEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQTVFETLKDLQEGKSSKMPTKHKGSSSWKMSVYDRGDAMSIDPDGLLCQSRDQQKWHGT
RSNKAVVGQGKYYYEATVTDEGLCRVGWSTDKASLDLGTDKWGYGFGGTGKKSYGKQFDS
YGEAFGINDTIGCYLDLQKDEIKWSKNGIDFGKAYDIPGHMRNEKFFAAVVLKNAEMSFN
FGTTPFKFNPPQGFTALFKAPKDSTVESKIAGGGAATAKPAPNAPQAIIIEPSRELAEQT
LTQIQKFKTHLENPVPRELLIVGGVNVKDQVDVLTKGVDIVCGTPGRLEDLISTGKLLLS
ACRFFVLDEADGLLSQGYGDLINRLHAQIPKVTNDGKRLQMVVCSATLHSFDVKKMAERL
MYFPTWIDLKGQDSVPETVHHCVCMVDPLKDTRWKDLRQHVETDGVHSEDKIQPHGTTQE
TYSEAVKILKGEYTVKAIEEHNMDRALIFCRTKIDCDNMEKYLRQRGQGKFSCVCLHGDR
KPQERKDNLQKFKDGKVKFLICTDVAARGIDVSGVPFVINVTLPDEKQNYIHRIGRVGRA
ERMGLAFSLVAAVKEKVWYHSNCTNRGRGCYNTKLTDRGGCCIWYNEPQLLSDVEEHLDI
TIDKVEPEMKVPINEFDGKVTYGQKRAGAGSGYKGHVETLAPAVMELAKLEKRVQTSFID
LKYKKKFCVR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatttgaggaaatgggagtgatgcgagaaattgcccgggcagtcgaggacatg
gattggagcttgcctacagatgtgcagtcagaggcaattccaatgatccttggaggcggg
gatgtcctcatggctgcagagactggcagtggtaagacaggagccttctgtttgcccatc
ctacagaccgtgtttgagacgctgaaggacctacaggaaggaaaaagcagtaagatgccc
accaaacataaggggagctcctcctggaagatgagtgtgtacgacaggggcgacgctatg
tctattgaccctgatggtttgctgtgtcagagccgagaccagcagaaatggcatggcacc
aggtccaataaggctgtagtagggcaaggaaagtactactatgaagccacagtgacggac
gagggcttgtgtcgtgtaggctggtccaccgacaaggcttctctcgatctcggcacagat
aagtggggatatggctttggaggcacgggcaagaaatcgtatggcaaacagtttgattct
tatggcgaggcttttggcatcaatgacaccattggctgctaccttgacctacagaaggat
gaaatcaagtggtcaaagaatggaatcgactttggcaaagcatacgatattccaggccac
atgagaaatgagaagttctttgcagctgttgttttaaagaatgcagagatgagcttcaac
ttcggaacaactccgttcaagttcaatccgccccagggatttaccgctctgttcaaggcg
cccaaagatagcacagtggagtccaagattgcgggcggtggggctgcgactgccaagcct
gctcctaatgccccacaggccatcataattgaaccatccagagagctagcagaacagacc
cttactcaaatccagaagttcaaaacccatttagaaaatccagtgccgagggagctgctg
attgttggaggggtaaatgtgaaagaccaagtggatgtactcactaaaggggtggatatt
gtgtgtgggacaccgggacgcttggaggacttgatttccactggaaaactattgctctca
gcttgcagattcttcgttctggatgaagctgatggtttgctgagtcaagggtacggcgat
cttataaaccggctccacgcacagataccaaaggtgaccaatgatggcaaacgtcttcag
atggttgtgtgctccgcaactctccactcattcgacgtcaagaagatggctgagagactc
atgtatttcccaacatggattgatctgaaaggccaagactctgtaccagagacggtacat
cactgtgtttgcatggttgacccattgaaagacactcggtggaaagatctgcgccagcac
gtagagaccgatggggtacattctgaggacaaaatacagccccatggaaccactcaggag
acctactcagaggcagtaaagattcttaagggcgaatatacagtcaaagcaatagaggag
cacaatatggaccgggcacttatcttctgtcggacaaaaattgactgtgacaacatggaa
aaatatctcagacaaaggggacaaggaaagttttcgtgtgtttgtctccatggtgaccgg
aaaccccaagaaaggaaggacaatctacagaagtttaaggatggcaaagtgaagttcttg
atttgtacagatgttgctgccagaggcatagatgtatcaggggttccctttgtgattaat
gtgacattacccgatgagaaacagaactacatccatcgaattgggcgcgttgggcgtgca
gaaagaatgggtctagcgttttccctggttgcagcagtaaaagaaaaggtgtggtaccat
tctaactgcacaaacagaggccggggatgttacaacacaaaattgacagaccgtggagga
tgctgtatatggtacaatgaaccacagcttttaagtgatgtggaggagcatcttgatatc
accatcgacaaggtggaaccggaaatgaaggtccccatcaatgagttcgatggaaaggtc
acttacggacagaaacgagcaggggccgggagtggatacaagggtcatgtagagacactg
gcccctgctgtcatggaactggccaaactggaaaaaagagtgcagacttcctttattgac
ctcaagtacaagaagaaattctgtgtgagataa
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