| Entry |
|
|---|
| Name |
(RefSeq) ATP-dependent RNA helicase DDX1-like
|
|---|
| KO |
|
|---|
| Organism |
maea Mya arenaria (softshell)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:maea00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:maea03041]
128243513
03016 Transfer RNA biogenesis [BR:maea03016]
128243513
Enzymes [BR:maea01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128243513
Spliceosome [BR:maea03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128243513
Transfer RNA biogenesis [BR:maea03016]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
128243513
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
8:complement(4683756..4741598)
|
|---|
| AA seq |
730 aa
MTAFEEMGVMREIARAVEDMDWSLPTDVQSEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQTVFETLKDLQEGKSSKMPTKHKGSSSWKMSVYDRGDAMSIDPDGLLCQSRDQQKWHGT
RSNKAVVGQGKYYYEATVTDEGLCRVGWSTDKASLDLGTDKWGYGFGGTGKKSYGKQFDS
YGEAFGINDTIGCYLDLQKDEIKWSKNGIDFGKAYDIPGHMRNEKFFAAVVLKNAEMSFN
FGTTPFKFNPPQGFTALFKAPKDSTVESKIAGGGAATAKPAPNAPQAIIIEPSRELAEQT
LTQIQKFKTHLENPVPRELLIVGGVNVKDQVDVLTKGVDIVCGTPGRLEDLISTGKLLLS
ACRFFVLDEADGLLSQGYGDLINRLHAQIPKVTNDGKRLQMVVCSATLHSFDVKKMAERL
MYFPTWIDLKGQDSVPETVHHCVCMVDPLKDTRWKDLRQHVETDGVHSEDKIQPHGTTQE
TYSEAVKILKGEYTVKAIEEHNMDRALIFCRTKIDCDNMEKYLRQRGQGKFSCVCLHGDR
KPQERKDNLQKFKDGKVKFLICTDVAARGIDVSGVPFVINVTLPDEKQNYIHRIGRVGRA
ERMGLAFSLVAAVKEKVWYHSNCTNRGRGCYNTKLTDRGGCCIWYNEPQLLSDVEEHLDI
TIDKVEPEMKVPINEFDGKVTYGQKRAGAGSGYKGHVETLAPAVMELAKLEKRVQTSFID
LKYKKKFCVR |
|---|
| NT seq |
2193 nt +upstreamnt +downstreamnt
atgacagcatttgaggaaatgggagtgatgcgagaaattgcccgggcagtcgaggacatg
gattggagcttgcctacagatgtgcagtcagaggcaattccaatgatccttggaggcggg
gatgtcctcatggctgcagagactggcagtggtaagacaggagccttctgtttgcccatc
ctacagaccgtgtttgagacgctgaaggacctacaggaaggaaaaagcagtaagatgccc
accaaacataaggggagctcctcctggaagatgagtgtgtacgacaggggcgacgctatg
tctattgaccctgatggtttgctgtgtcagagccgagaccagcagaaatggcatggcacc
aggtccaataaggctgtagtagggcaaggaaagtactactatgaagccacagtgacggac
gagggcttgtgtcgtgtaggctggtccaccgacaaggcttctctcgatctcggcacagat
aagtggggatatggctttggaggcacgggcaagaaatcgtatggcaaacagtttgattct
tatggcgaggcttttggcatcaatgacaccattggctgctaccttgacctacagaaggat
gaaatcaagtggtcaaagaatggaatcgactttggcaaagcatacgatattccaggccac
atgagaaatgagaagttctttgcagctgttgttttaaagaatgcagagatgagcttcaac
ttcggaacaactccgttcaagttcaatccgccccagggatttaccgctctgttcaaggcg
cccaaagatagcacagtggagtccaagattgcgggcggtggggctgcgactgccaagcct
gctcctaatgccccacaggccatcataattgaaccatccagagagctagcagaacagacc
cttactcaaatccagaagttcaaaacccatttagaaaatccagtgccgagggagctgctg
attgttggaggggtaaatgtgaaagaccaagtggatgtactcactaaaggggtggatatt
gtgtgtgggacaccgggacgcttggaggacttgatttccactggaaaactattgctctca
gcttgcagattcttcgttctggatgaagctgatggtttgctgagtcaagggtacggcgat
cttataaaccggctccacgcacagataccaaaggtgaccaatgatggcaaacgtcttcag
atggttgtgtgctccgcaactctccactcattcgacgtcaagaagatggctgagagactc
atgtatttcccaacatggattgatctgaaaggccaagactctgtaccagagacggtacat
cactgtgtttgcatggttgacccattgaaagacactcggtggaaagatctgcgccagcac
gtagagaccgatggggtacattctgaggacaaaatacagccccatggaaccactcaggag
acctactcagaggcagtaaagattcttaagggcgaatatacagtcaaagcaatagaggag
cacaatatggaccgggcacttatcttctgtcggacaaaaattgactgtgacaacatggaa
aaatatctcagacaaaggggacaaggaaagttttcgtgtgtttgtctccatggtgaccgg
aaaccccaagaaaggaaggacaatctacagaagtttaaggatggcaaagtgaagttcttg
atttgtacagatgttgctgccagaggcatagatgtatcaggggttccctttgtgattaat
gtgacattacccgatgagaaacagaactacatccatcgaattgggcgcgttgggcgtgca
gaaagaatgggtctagcgttttccctggttgcagcagtaaaagaaaaggtgtggtaccat
tctaactgcacaaacagaggccggggatgttacaacacaaaattgacagaccgtggagga
tgctgtatatggtacaatgaaccacagcttttaagtgatgtggaggagcatcttgatatc
accatcgacaaggtggaaccggaaatgaaggtccccatcaatgagttcgatggaaaggtc
acttacggacagaaacgagcaggggccgggagtggatacaagggtcatgtagagacactg
gcccctgctgtcatggaactggccaaactggaaaaaagagtgcagacttcctttattgac
ctcaagtacaagaagaaattctgtgtgagataa |
|---|
