Mya arenaria (softshell): 128243514
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Entry
128243514 CDS
T09995
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128243514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128243514
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128243514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
GIDA
Motif
Other DBs
NCBI-GeneID:
128243514
NCBI-ProteinID:
XP_052817283
LinkDB
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Position
8:complement(17171081..17180852)
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AA seq
272 aa
AA seq
DB search
MPTDTRRINGPESSISPYAFVKSKQLTDKAAESGRSDGRTFEKVRPIFLKTGLITQAQGS
SYIEQDGTKVICAVYGPRAVIKREEFSMQGQMTCEFKFAPFSCRQRRQHMQDAEEKDYSV
QLLEALEPAVLLHKFPKAQVNIYITVLQNDGSALAASMTCASMALADAGIEMYDLVTGCS
ARIKGDTILMDPCSSEEYSDKDSATVNNGSVTVGIMPSLNQISAVTSKGELHFEHLRKAI
RQCVDVCIQLYPVCQQSLTSAVEDLIQKGSDT
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgacacaagaagaataaatggacctgaaagttcaatcagtccatacgccttt
gtcaaatcaaagcaattaactgataaagcagcagaaagtgggcgtagtgatggaaggaca
tttgaaaaagttagacctattttcttgaagacgggtttaatcacacaggcccagggttca
tcatacatagaacaggatggtaccaaggtgatttgtgctgtctacggccctcgcgccgtt
atcaagagagaagaatttagcatgcagggtcaaatgacttgtgagtttaagtttgcgcca
ttctcgtgtcgccaacggagacaacacatgcaggacgcagaggagaaggattactctgtt
cagttgttggaggcattggaaccagccgttctattgcacaagtttccaaaagctcaagtg
aacatctacatcaccgtgttacagaatgatggaagtgcgctggcggcttcaatgacatgc
gcgtccatggctctggctgatgctggtattgagatgtatgacctcgttacaggatgttct
gcacgcattaaaggagacactatactgatggacccttgctcctcagaagaatattcagac
aaggacagtgctacagtgaacaacggcagtgtaacagttggtatcatgccttctctcaac
cagatctcagctgtcacctccaagggggaactgcattttgaacacctcagaaaggctatc
cgtcagtgtgtggatgtgtgtatccagctgtaccctgtgtgccaacagagcctcacatca
gctgtcgaggaccttatacagaaggggagtgatacctga
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