Mya arenaria (softshell): 128243907
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Entry
128243907 CDS
T09995
Name
(RefSeq) F-box/LRR-repeat protein 2-like
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128243907
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128243907
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_Zer-1
F-box-like
F-box
LRR_8
LRR_At5g56370
LRR_14
LRR_RPS2
F-box_5
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
128243907
NCBI-ProteinID:
XP_052817875
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All DBs
Position
8:complement(30605524..30611324)
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AA seq
634 aa
AA seq
DB search
MTASRLPVEVVTHIMQFLSVSDRKEAALVCQNWYEASLDPILQRDIILHFYASSAALTSK
AIPSLSKRRLPHLVLNDFDSSLNAKAVVLKSCEQFGENLKSLSLRGSELTEKTFVELLSH
CKNLVSLDLSCCNTLFMTGTLLEMNADIQLLKSTLTNVEEVNMSSIRHLTDATFNRIMTV
CENVEKVSLMSAPIVFSSELFKPTSFRFANSSVLTFRNMMDFVITQQCLRSLNLSRTQIE
DSNLKELVSTPELQLQELILVGCRNISDEGISSVCKYQTRLSLLDIKECPDLTNSSLMTI
SACLGQLKHLNMHKCKQVSDKAVSTMTKLEEMQTLDLSECHLVSSKGLIAGLCGDSISLC
LTSLNVSCTEADDSFVEKACKNLPALTYLDLSSCFKVTDVSVHAISKSLKHLRYLRLAFC
HEVTDLGLLGICSGLDNKDSQIYKDGYEHNMNVRKYQSTVIFKKPEKSPTGPKNGDPEGK
TFAIKPLALSNLAGLRHLDLSACKKLSDTSLKQVLKFPELHFLGLGNLKELSDDGLVKIV
YQNPSIEELDLTQCKNISDFAMDAVTKHLQRLKLLNVMGCDLITDKTLGYIKRHCKRLRH
LDVSFCGGISHNAINELEIEMPSLISVHKRMIGS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtcacgtttgccggtggaggtggtgacacacataatgcaattcctgtctgta
tcggacagaaaagaggcagccttggtgtgtcaaaattggtacgaggcttcactggatcca
atcctgcagcgagacattatcctccatttctacgcttcttcagctgctcttacaagcaaa
gctattccttctctttcaaaacgacgactgcctcatcttgttttgaatgattttgattct
tcccttaatgccaaagctgtagttttgaaatcttgtgagcaatttggtgaaaatcttaaa
agtttatctctgagaggaagcgagttaactgaaaaaacatttgttgagcttctgtcccat
tgtaagaatttggtcagcctggatcttagttgctgcaacacccttttcatgacaggcacg
ctgttggaaatgaatgcagatattcagctacttaagtcaactcttacgaatgtcgaagaa
gtgaacatgtcttcgattcgtcaccttaccgatgcgactttcaacagaattatgacagtt
tgtgaaaatgttgaaaaggtttccttgatgtcagcaccaatagttttttcttcagaactt
tttaagccaacaagttttcgttttgccaacagctccgttctgacattcaggaacatgatg
gattttgtgataactcaacaatgtctgaggtcgttgaatttatcacgaacccagattgaa
gattcaaacctaaaagagcttgtatctactccagaacttcaacttcaagagttaattctt
gttggctgtcggaatatcagcgatgaagggatttcaagtgtatgcaaataccaaacaaga
ttgagtttgttagacataaaggaatgccctgatcttacaaacagctctttgatgacaatt
tcagcttgccttggacagttgaaacacctgaacatgcacaaatgcaagcaagtttcagac
aaagccgtctcaaccatgacaaagttggaagaaatgcaaacccttgacctgtccgaatgc
catttagtctcttcaaagggtctaattgcaggtttatgtggagattctataagcctttgt
cttactagtctaaatgttagctgcactgaagcagatgacagttttgtagaaaaagcctgc
aaaaaccttccagccttgacataccttgaccttagctcttgtttcaaggtcacagatgtc
agtgtccatgctatctccaaaagtctgaaacacttgaggtatttgcggctggcattttgt
catgaggttacagatcttggtttgttgggcatctgttctgggctcgataacaaagattca
caaatttacaaagatggctacgagcacaatatgaacgtccgaaagtaccaatcaactgtg
atattcaagaaaccagaaaagtctccaactggaccaaagaatggggatcctgaaggtaaa
accttcgccatcaaacctttagccttgagtaacttggctggtctgcgtcacttagatctg
tctgcttgcaaaaaactgagcgacacaagtttgaaacaggttctcaaatttcctgagctg
catttccttggtcttggaaacctgaaggaactatctgatgatggtctagtaaagattgta
tatcagaatcccagcatagaagagctagatttgacgcagtgtaagaacatttcagatttt
gcgatggacgctgtaaccaagcatctccaaagattgaagcttctcaatgttatgggttgt
gatctgattaccgacaagactctcgggtatataaagagacattgcaagcgtctgcgacac
cttgatgtctcattctgcggtggaatttcccacaatgcaattaatgaactagaaatagaa
atgccatcgcttatttctgttcacaagcgcatgattggatcgtga
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