KEGG   Mya arenaria (softshell): 128243940
Entry
128243940         CDS       T09995                                 
Name
(RefSeq) WD repeat-containing protein 7-like isoform X1
  KO
K24738  rabconnectin-3b
Organism
maea  Mya arenaria (softshell)
Pathway
maea04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:maea00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    128243940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:maea04131]
    128243940
Membrane trafficking [BR:maea04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    128243940
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR75_1st ASA1 WD40_Gbeta ANAPC4_WD40 CFAP251_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_VPS8 PAC11 Beta-prop_Aladin TRM82_WD DSE1_N Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_LRRK2 Beta-prop_WDR75_2nd WDR72_alpha-sol Beta-prop_IP5PC_F RMC1_N
Other DBs
NCBI-GeneID: 128243940
NCBI-ProteinID: XP_052817917
LinkDB
Position
8:complement(33436864..33484932)
AA seq 1522 aa
MVVGNNIVVPVVLWGKNAPTHCISAIWMSSNMKHVVTACNDAQLCVWDVTPTWEVYPRHM
LFGHTAAISCIAPGSAQQGNTLLVSASENGEMCLWDIADGRCIETTKMSYTHSSMQAYHF
RNTKDVKLVCNGYYAEILLINPLTFDITHTLCSRVSPDWISACCVLRPAKREDDVIVAIS
NSGAVKVWALSGSEARSKVIHEDESKQIRCLNAQTLTCCPYNQRTVLIVCSKYWQIYDAG
DFTLLCSEANRCGERWSGGDFLSVDRVVVWSNEGKGYLYKLPTNCDVSEDANPDSESYHH
RAPSSPHAYYVLDLNMDKTLACAPAMQLFSSISGRGDGARTTLLLRGDSEGQVVIWKLPD
VSERQMTLVRQESFDRLPVLKPRCAATLQSVWDSLSHPPAGILDGFREIEDGALLTASVY
IPSQGRLACGRSNGSIIILPAVQCIMIQLLNNKLLNKDCIHLLTLSGHDGRVNCLLYPFN
ESTRYDPRHLLSGGADFSVILWDIQDGTRLHTFTVHGGEVAQLIVPPSNCNVRVLTSVCS
VAVDHSVALLSMKERKCIMLASRHLFPVQCIRWRPLDDFMVVSCSDGTVYVWQMETGHLD
RVVHGLTAEEILNNCDENAVPIHDQLTNPNLTLAQAFRRRNLATFRTLAQQKLQQLNQNQ
QTAGAKLDLSHPQEYPMYIEGIKTNMLDPEGHVLFFDVEALIVQLLTNEFATMSPGELEA
KGLSSLLPGSRRASVDETDSPPTIAGFIAKVKDTAEKIQANVDPHGGFTPINQPPGSSQP
PSRKPSQPSTPIHSPNLGSKSTRKNRPDPLSFKTNNLVMEVAQLFMSMLHAWGLDPDLDK
LCLNKLGTLKPKLPVSFGLISREGHMALMLPGWHKGVCAGGQSQMDGQGRRSTLVDQTRA
FSISDHEEDDYSGRSPSFFGGSVEADVAEEREQEVALYTRQARWRVSSPVTTQHLISVIS
VANTLMSMNHATFKNRKPEKRRSRQRSFQGGPHGLLVSETDGGTSTGSEDESADMVTIQQ
AQFKQGWSLLAAHHCVLLPELVDSGNYFSPQLEILARRWQDRCLEIREAAQALLLAELRR
IGPEGRMQVVDEWSPHLPTYVDPAFSILNPEAQGQSHGEDMEEEADSEQYLGDDSNEERC
IGESPVHKPSRSFESRRKQATAIVMLAVLGAEFGAEILPMRGKVMEESGKRARKGLEGFS
SSNYLLAQHTSKALTFLLQQPPSRKLPAHTPIRRAAIDLIGRGFPVWEPYLDVSAVLLGL
LELCVGADRLVPSVTFGLPLSPAADACRTARHALSLIATARPATFIITMAKEVTRYNALL
STAQSHQHANIQNSVLVRSKPEILHVIELLVDKMPTDVAEQIVEAMEIIIHCLDAGQLKA
KGLQELFPAICRFSMVTCCSQTRRIWVGGRSGQLAFYELKQNSKCQVISAHGGPVIAVSI
SPDGKFLATFSHIDQKLKFWQTASSSIFGLGSQHTKCVRQIATQPVPVQPHTNLLKLVRL
VWTDVRIIVLLTADGSEYKYFV
NT seq 4569 nt   +upstreamnt  +downstreamnt
atggtagttggtaacaatatagtggtaccagtagttctctggggaaagaatgccccaacc
cactgtatatcggccatatggatgtcttccaacatgaagcatgtcgtcactgcatgcaat
gatgcccagctctgtgtatgggatgtaacacctacctgggaggtataccctcgccatatg
ttgtttggccacactgcagccatatcgtgtattgccccaggctcggcacagcaaggcaac
accctcctagtcagcgcatcagaaaatggagagatgtgtctttgggacatagcagatggc
cgttgcattgagacaaccaagatgtcctacactcacagtagcatgcaggcgtaccatttc
cggaacacgaaggatgtgaagcttgtgtgtaatggctactatgcagaaattctgctgatc
aatcctctcacatttgacatcacccacacattgtgttcccgtgtatcccctgactggatc
agtgcttgttgtgtgctccgaccagcaaaacgggaggatgatgtgattgtggcaatatcc
aactctggtgctgtcaaagtgtgggcccttagtggtagtgaagcaaggagcaaggttata
catgaagatgagtctaagcagatacggtgcctgaatgcccagaccttgacctgctgcccc
tacaaccagcgtactgtccttattgtgtgctccaagtactggcagatttacgatgctggt
gattttacgctgctgtgttcagaagcaaaccggtgcggagagcgatggtccggtggggat
tttctcagcgttgaccgcgtcgttgtctggagtaacgaggggaaaggatacctgtacaaa
ctacccacaaattgtgatgtcagtgaagatgcaaatcctgacagtgagagctaccaccat
cgagccccttcctcaccccacgcctactatgtactggatttaaatatggacaagacattg
gcgtgtgcacccgcaatgcagctgttctccagtatatctggtcgtggagatggagcaagg
accacactgctgctacgtggagactcggagggccaggttgtcatctggaaactccctgac
gtttccgagaggcagatgacacttgtacgacaagaaagctttgataggctgccagtgttg
aagccacggtgtgcggcaacattacagagcgtctgggactctctgagccaccctccagcc
ggcatactcgatggatttagagagatcgaggatggagcattgttgacagcatctgtgtac
atcccatcccaggggcggttggcatgtgggcgaagtaacggctccatcatcattctccct
gctgtacagtgcataatgatccaacttctaaataacaagctgctgaacaaggactgtatc
catttgttaaccctatctggccatgatgggcgtgtgaactgcctgctgtatccattcaat
gagagcacccgttacgacccccgccacctactgtcggggggagcagatttctcagtcatt
ctctgggacatacaggacggcacgagactacacacattcactgtgcacggaggagaagtc
gctcagctcattgttccacccagcaactgtaatgtgcgtgtgctgacctcagtgtgttca
gtggctgttgaccattctgtagcattactgagcatgaaggagcgcaagtgtattatgctt
gcttcacggcacctgtttcccgtccagtgtattcgttggcggccccttgatgacttcatg
gttgtcagttgttcagatggcactgtctatgtctggcagatggagactggccacctggac
agagttgtacatggactgactgcagaggaaatcctgaacaactgtgacgagaatgctgtg
ccgatacatgatcaactgacaaaccccaacctaacgctggctcaggcattcagacgacgc
aacctggcaacattccgcacgttggcccagcagaaactacagcaattaaaccagaaccag
cagacagcaggtgccaaacttgacctctcccacccccaggagtatcccatgtacattgag
gggataaagacaaacatgctggacccggaggggcatgtcctcttctttgatgtggaagcc
ctcatagttcaactgcttaccaatgagtttgctactatgtccccgggtgagctggaagcc
aaaggcctgtccagtctgctaccaggcagccgacgggcctccgtagatgaaacggactca
cctcccaccatcgcaggtttcatagcaaaagtgaaggacacagctgagaagatccaggcc
aatgttgacccacatgggggatttacccccataaaccaacctccagggtctagccagccc
ccctccaggaagccctcccagccctcgacacccatacactcccccaaccttgggtcaaaa
agcacacgcaagaatcgaccggatcctctcagttttaagacaaacaatctggtgatggag
gttgcccagttgtttatgtccatgctccatgcctgggggctcgaccctgacctcgacaaa
ctctgtctcaacaaactaggaactctcaaaccaaagttaccagtatcgttcgggttgata
tctcgggagggtcacatggcattgatgttgccggggtggcacaagggtgtgtgtgctggg
gggcaatcgcagatggatggccaaggtcgaaggtcaacactggtagaccagaccagggca
ttctccatctcagaccatgaggaggatgactacagtggccgttcaccatcattttttggc
ggttctgtggaagctgacgtggctgaggagcgggaacaggaagtggcattatacacacgg
caggcacggtggcgcgtgtcgtctcccgtcaccacacagcacctgatatccgtcatctca
gtcgcaaacacacttatgagcatgaatcacgctacattcaagaaccggaaacctgagaaa
cgaagatctaggcagcggtcattccagggaggtccccatggtctactggtcagcgagact
gatgggggaacaagcactggcagtgaagatgagagtgcagacatggtaacaatacaacag
gcacaatttaagcaaggctggagccttcttgctgcccatcactgtgtgttacttccagag
ctggtggactccgggaactacttttcaccgcagcttgagattttggcgagacgttggcaa
gatagatgcctcgagatccgggaagcagcccaagccctgctattggcagagctgcgaagg
atcggtccggagggtcgcatgcaggttgtagatgaatggtccccgcaccttccaacatac
gtggaccccgcattcagcatcctcaaccccgaggcccaggggcagtcccacggggaggac
atggaagaggaggcagacagtgaacagtaccttggagatgattcaaatgaagaaaggtgt
attggtgaatctccagtgcataagccatcaaggtcgtttgaaagtcgacggaagcaggct
acagctattgtaatgcttgctgtgcttggagcggagtttggggctgagatcctgcctatg
cggggtaaggtgatggaggagagcgggaagcgagcgaggaagggcctcgaggggttctcc
tcgtccaactatctcctcgcacaacacaccagcaaggcgttgaccttccttctccagcaa
cccccgtcgaggaaactgcctgcccacaccccgataagacgggcagcaattgacctgata
gggcgaggatttcctgtctgggagccctacctggacgtgtccgctgtcctactggggctt
ctagagctatgtgtaggggcggatagactggttcccagtgtgacgtttgggttgccatta
agcccagcagcagatgcatgtagaactgctagacatgccttgtctctgatcgccaccgcc
agacccgccaccttcatcatcaccatggccaaggaggtcacaaggtacaatgccttgttg
tcgaccgcccagtcccaccagcatgccaacatccagaactctgtgctggtcaggtccaaa
cctgagatcctccatgttatagagctcctcgtggacaagatgccaacagacgtagctgaa
caaattgttgaggctatggagatcatcattcactgccttgatgccggtcagctcaaggcc
aagggtctccaagagctcttcccagccatctgcaggttcagcatggtgacatgttgcagc
cagacacggcgtatctgggtcggtgggcggagcggacagctggccttctacgagctcaag
cagaactccaagtgtcaggtgataagtgcccacggtggaccggtgatcgcagtgtccatc
tcacccgacgggaagttcctcgctacattctcacatatcgaccagaaactcaagttctgg
cagacggcatcgtcatccatatttggccttggttcccagcacactaagtgtgtccgtcag
atcgccacccagccagtacccgttcagccccacacaaacctgctgaagctcgtacgactg
gtatggacagatgtacgcatcattgtgctgcttactgccgacggctctgagtacaagtac
tttgtttaa

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