Mya arenaria (softshell): 128244595
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Entry
128244595 CDS
T09995
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128244595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128244595
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
128244595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
ZGRF1-like_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
128244595
NCBI-ProteinID:
XP_052818560
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All DBs
Position
2:23659344..23690127
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AA seq
932 aa
AA seq
DB search
MRRSAAPSQAGNRPKFVAPLLGNRTASLTETDRTDRKPVKQTHVLKRIFPNPELDSTDKI
ADVTCIERAEEVDPVVKKPRFQAPIAGSRPSVTLPPASSSARVSAHVEAKRTGFTAPVVS
NKNDNKGPGDSENATPEEASSQCGYFNVVWCKRSNKKHKKWEGDAILVTSGRSVTLYDTE
GKEIGKSSGYKSTELATLKEDETLPIGGKEIQVMSILKEAAFKSGKCFLGSTGSTSGPAP
SLSTAPARTANKQFSRPQILGSMPPETRPQEPTLVKPRHDPTAPGALVLPRPSQTHQWEC
NKSGVAVVDVVVDPYLASNLRPHQREGVTFLYSCVMGFRNFSGCGAILADDMGLGKTLQC
ISLIWTMLKQGPYGGKPVAKKILVVTPGSLVKNWHAEFKKWLGFERLQVYAVSADKKVEE
FTKTSIYPVLIISYEMFVRMFDLLQKLTFDLIVCDEGHRLKNTAIKTTSLLSSLSCVRRV
VLTGTPIQNDLQEFFSIVEFCNPGVLGTSSGFKRVYEDPIVSSRQPGATPAQVALGEERG
AELARMTQMFVLRRTQEINNKYLPPKKEIVLFCRPSPLQLSLYHQLLRSQLVRSCLSGCL
AGSPHLVCIGALKQLCNHPGLIYQKALKAQRDKDELENAETSVYDGLLELFPDDFKPDRR
LEEHSGKLTVLSALLHCIHTSDMLEKIVVVSNHTKTLDLIECLCKGTGYGYLRLDGQTPT
ARRQELVTRFNSKHSQEFIFLLSSKAGGVGLNLIGASRLVLYDIDWNPANDLQAMARVWR
DGQRHAVHIYRLLTTGSIEEKVYQRQISKQGLSGAVMDARDKGKSDVQFSLKDLRDLFTI
NLTTDCDTHDLLSCECGGSGQKVENPVSVAEQRLCQLGAPARASRKRNVGMDELLQWKHH
TADVLGLHKAWYLEDARDAVSFVFYSEVKASS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgatcagcagcccctagtcaggctgggaatcggcccaagtttgtggcccctctc
ctcggcaacagaactgcatctctgactgaaacggacagaacagatcgcaaacctgtcaaa
cagacccatgtgctgaagaggatttttcctaacccagaactagattctactgacaaaatt
gctgatgtgacatgcattgaaagagcagaagaggttgacccagttgtgaagaagccacga
tttcaggcccctattgcaggaagcagacctagtgttactctccctcctgcatctagcagt
gcaagagtatctgcacatgttgaggcaaaaagaacaggttttaccgcacctgtagtgagc
aacaagaatgataacaaaggccctggtgacagcgaaaatgctacaccagaggaggcttca
tcgcagtgtggatatttcaatgttgtctggtgtaaacgctcaaacaaaaagcacaagaag
tgggaaggagatgctatactggtaacaagtggcagaagtgtaacactgtatgacactgag
ggaaaagagataggtaaaagttctggttacaaatctacggaattggccaccctgaaggaa
gatgaaactctgcccattggtgggaaagaaatacaggtgatgtccatattgaaggaggca
gctttcaagtccggcaagtgtttcctgggatctacaggcagcaccagtggtcctgctcct
agtcttagcactgcaccagcacggaccgccaacaagcagttcagtcgacctcagatactg
ggctctatgcccccagaaacccgaccccaagaacctacattagtaaagcccaggcatgac
cccacagccccaggtgctttggtcttaccccgacctagtcagacacaccagtgggaatgt
aacaagagtggagtggctgtcgtggatgttgttgtggacccctacctggcctcaaatttg
aggccccatcagagggaaggggtcacattcctatactcctgtgtcatgggttttcggaat
ttttctggatgtggtgctatattggctgatgacatgggccttgggaagactttgcagtgt
atttcattgatctggacaatgttgaagcaagggccgtatggagggaagccagtggccaag
aagatccttgtggttacccctggcagccttgttaagaactggcatgcagagttcaagaag
tggctgggctttgagagactacaggtgtatgctgtcagtgcggacaagaaagttgaggag
ttcacaaagacctcaatctatccggtactgattatatcatacgagatgttcgttcgaatg
ttcgacctccttcagaagttgacctttgacctcattgtgtgtgatgaaggtcaccgcttg
aagaacacagccattaaaaccacatcattactatcaagcctgtcctgtgtgaggagagtg
gttctgactggaacacccatacagaacgacctgcaagagttcttctccattgttgagttc
tgtaaccctggtgtcttaggtaccagttcaggtttcaagagagtgtacgaggacccaata
gtgtcatcaaggcaaccaggagccacacccgcccaggttgccttaggggaggagaggggg
gcggagctagccagaatgacccagatgttcgtgctccgacgcacacaggagattaacaac
aagtacctgccgccaaaaaaggagatagtgctattctgcagaccttcacccttacagtta
agcctgtaccatcaactgttgagaagccagcttgtacggtcctgcctatcaggctgtctg
gcaggctccccccatcttgtctgtatcggggcactcaagcaactgtgtaaccacccaggg
ctcatataccagaaggcccttaaagcccagagggataaggacgaattggagaatgcagag
accagtgtttacgatggccttctggaattgtttcctgatgacttcaagccggataggaga
ttagaggaacattcaggcaaactaactgtcctatccgctttacttcactgcatacacaca
tcagacatgcttgagaaaattgtggtcgtctccaatcatacaaagaccttggatctgatt
gagtgtttgtgtaaggggacagggtatggctatctcagactggacggacagacacccact
gctcgcagacaggagctggtcacacggtttaacagcaaacattcacaagagttcatattc
ctactaagctcaaaggctggcggtgttggcttaaatctgataggagcatctagactggtg
ctctacgacatagactggaaccctgctaatgatcttcaggccatggctcgagtgtggagg
gatggacagaggcatgccgtacatatttacaggctcctaactacgggcagtattgaggag
aaggtataccagaggcagatcagcaaacaggggttgagtggggctgtgatggacgcccgg
gataagggcaaaagtgatgtacagttctccctcaaagatctcagggaccttttcaccatt
aacctgacaacagactgtgacactcatgatcttctcagctgcgagtgtggaggtagtgga
cagaaagtggagaacccagtcagcgttgccgagcaacgtttatgtcagctgggggcacct
gctagggcttcaaggaagaggaatgtgggtatggatgaactgctccagtggaaacatcac
acagctgacgttctgggacttcataaggcctggtacctggaagatgcaagggatgccgtg
tcgtttgtcttctacagtgaagtgaaagcctcctcctga
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