Mya arenaria (softshell): 128244818
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Entry
128244818 CDS
T09995
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128244818
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Gene silencing
Transposable elements
128244818
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
128244818
NCBI-ProteinID:
XP_052818869
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Position
8:complement(28794460..28797549)
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AA seq
350 aa
AA seq
DB search
MTNVRRIINLCRKRKILRRKVFLRTPDFNPLDELSDEEIFARYRFRRETILFILDLIDLH
VRFATARSMAVSPLMQLLAALNFYATGAFWKTTGDSLKLSAATVHRCVHRVSKALSDVID
SMFIRFPTPNELETTKRSFYEKSGFPDVVGAIDVFCIRIVKPMQNDGEYFNRKGYHSYNL
QVTCDTNTRITSCEERSGSVDDATMFQESEIRKIFEQGSFEGVLVGDSAFPCEKHLMVPY
LETDSESHERYNNAHSEAREPIEQTFELIKRRFACLNSGLRVEPEKARTIIRACVVLHNI
GLARGDLLPASDTDGDSEDDAEEIPDMACEIGCDSQYREQIRKKYFCDSS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgtaaggcgaattattaatttgtgtagaaaaaggaaaatactacggcgaaag
gtttttctgcgcacacctgattttaaccctttggacgaactttctgatgaagaaatattc
gcacggtacagatttcgacgagaaaccatactgtttatattggacttaatcgacctgcat
gttcgcttcgcgacagctcgtagcatggccgtttcgcccctgatgcagcttttagcggcg
ttgaatttctacgcgaccggggcattttggaaaactacgggtgattctttgaaactttct
gcagcaactgttcatagatgtgtacacagagtatccaaggctctatctgatgtaattgac
tcgatgttcatacggtttccaactccgaacgaattagaaacaacgaaaagatccttttac
gaaaagtcaggttttcccgacgtcgttggtgccatagatgtgttttgtatacgaattgtt
aaacccatgcagaatgatggtgaatatttcaacaggaaaggataccattcatacaatttg
caggtaacgtgtgacaccaacacgcggataacaagttgcgaagaaaggtcaggaagtgta
gacgatgccacaatgttccaagaaagtgaaatacgtaaaatattcgaacaagggtcgttc
gagggcgttctagtcggcgattcagccttcccatgcgaaaaacacctgatggttccgtat
cttgaaaccgacagtgaaagtcatgaacgatacaataacgcccatagtgaagccagagaa
cctattgaacagactttcgaacttatcaagcgtagatttgcgtgtcttaactcagggctg
agagtcgaaccggaaaaggcgcgcacgattatccgcgcatgcgtggtcctgcacaacatt
gggttagcgaggggggatttattgcctgccagtgatactgatggtgattcggaggatgac
gctgaagagattcctgatatggcttgtgaaattggatgtgatagccaatacagagaacag
attcgcaaaaagtatttctgtgactcttcctga
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