Mya arenaria (softshell): 128244897
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Entry
128244897 CDS
T09995
Name
(RefSeq) ligand-gated ion channel 4-like
KO
K05312
nicotinic acetylcholine receptor, invertebrate
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128244897
Ion channels [BR:
maea04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128244897
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128244897
NCBI-ProteinID:
XP_052819019
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Position
1:complement(7011811..7121208)
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AA seq
487 aa
AA seq
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MDWLLMACLAIKAMLVMADENEYRLVRDLFVAYDKRVRPATHWSKPVNTTYGVALAQIID
VDEKNQIITTNCWLNQNWLDPKLRWEPQKYGNITVIGVPYTDIWKPDVVLYNNADSSSTV
TSISSNVIIHYSGNVTWLSMSIFRSSCSIDVKYFPYDVQNCTMSFASWSFGIDQLNILSH
STEGDVSNYVHSSEWSLLEYTPRRQLEKFSCCPDDVPFMKYDIVIKRRPLFYLFNMVMPC
ILITLVALLGFYMPPESGEKVSMGITTLLSIVVFLMIVSESLPPTSDVVPLIGLYYGITI
AIVSSATAMTVLTLNIHHKGARGIEIPPTVKRVFFGIVARLLCIKLDLPEPPGPGLTRIP
SHEHCLYNERSSYERPPDLEQEKPSQNGGISGRFMPGGVTMGMGMGESGIGAPSGGYEEQ
LVRVLRKVYQTIEKNEIRLAEQDRRDLLRQEWQQLALVIDRLLLLGFIAVTVTVTLVVLV
PQEYNKP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggactggttgctaatggcctgccttgcaataaaagcgatgttggtgatggcagatgag
aacgaataccggctggtccgggacctatttgtggcatacgacaagcgggtacgacccgca
acacactggagcaagccggtcaatactacctacggcgtagcccttgcacagatcatcgac
gtcgacgagaagaatcagatcatcacaacaaactgctggctcaatcaaaactggctggat
ccgaaactacgctgggaaccacaaaaatacggcaacattacagtcataggggtaccttac
acggatatttggaaaccagatgttgttttatataacaacgccgattccagttctaccgtg
acatctataagctccaacgtgataattcactactccggtaacgtgacgtggctttccatg
tcaatcttccgtagttcttgctcaattgacgtcaaatatttcccatacgacgttcaaaac
tgtacaatgtcattcgcgtcgtggtcgttcgggatagaccaactgaacattctcagtcat
tccactgagggtgatgtctcaaactacgttcatagctctgaatggagtctccttgagtat
acaccccggaggcagctggagaaattctcgtgttgcccggatgatgtgccttttatgaag
tatgacattgtgataaagcggcgaccgcttttctacctgtttaacatggttatgccgtgt
atcctgatcaccctggtggcgttgttgggtttctacatgcccccagagagtggtgagaag
gtttcaatgggaattacaacactcctgtccatcgtcgtcttcctcatgatagtctcagag
agtctcccgccgacatcggacgtcgtaccgctcataggtctatactacgggataactatc
gcgatcgtttcctcggctacggcgatgacggtgttgacgctcaacattcaccacaagggc
gcccggggtatcgagataccaccaacggtgaaacgggtgttctttgggatagttgctcgg
cttttatgtatcaaactagaccttccagagccaccgggacccggcttgacccggatcccc
tcacacgagcactgtctatacaacgagcgttcctcttacgagcgtcctccggaccttgaa
caagagaaaccctcccaaaatggcggcatttccggtcgcttcatgcctgggggcgttact
atgggaatgggaatgggggagagtgggatcggtgcgccatcgggtggttatgaagagcag
ctagttcgtgtgctcaggaaggtttatcagacgattgaaaaaaatgagattagattagca
gaacaggaccggcgggatctgttacgtcaggaatggcagcagctggccctcgttattgac
cggctcctgctgctgggattcattgccgttaccgtcactgttacgctcgtagttctcgtt
ccgcaggagtacaacaagccctga
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