Mya arenaria (softshell): 128245149
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Entry
128245149 CDS
T09995
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128245149
03009 Ribosome biogenesis [BR:
maea03009
]
128245149
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128245149
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128245149
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Pre-60S particles
Helicases
128245149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
128245149
NCBI-ProteinID:
XP_052819355
LinkDB
All DBs
Position
8:complement(53830304..53848711)
Genome browser
AA seq
746 aa
AA seq
DB search
MSAYIDLGLIGTISENDEVKVASESSDSEEEVQKEKKKKKKMKTDFNNAFSFADQEDPFK
GFKSIKLKFAKKADPTFTLDEKIEAARKRRKLQNGDDIQEDSEEETKGDNPDEELEQDVD
SSDGEFVADTLRTKEKKKKKKRKRKGEPDSDEEQVGEKIQFSERIDTYDRNSSFSDMNIS
RPLMKALGLLNFEQPTPIQSATIPIALLGRDICACAVTGSGKTAAFMLPILERLLYKPKE
TSVTRVLVVVPTRELAVQVHAVAKQLANYTNIQITLAAGGLDLKAQEAALRLGPDIVIAT
PGRLIDHLHNSPSFNLNSVEILVLDEADRMLDEYFAEQMKEVIRLCARTRQTMLFSATMT
EEVKDLAAVSLDKPVKVFINENTDTALGLRQEFVRIRANREGDREAIVAALLSRTFPDHC
IVFIQTKKQAHRMHLVLGLLGINVGELHGNLSQAQRLDALRRFKESEIDILLATDLAARG
LDIDGIKTVINFTMPNTVKHYVHRVGRTARAGKSGRSISLVGEQERKLLKEVVKKAKTPL
KTRIVPQDVIAKYRERISALEKDIVEIEQAENEEREMRATENQMNKATRILDENQPDQGK
RTWFQSHKERLAEKEALRLGDFDSLPSKMKKKKLTKDQLKHKPNTPEDRSFFEIQKSQQY
SAKFAKKTARQQKVMGITDSSLNNNNASKKKKKNKMKSAFDKELTNTGRTAVRQYRAGPS
YKERKELGLGGNKKKSGQQKNMKRKR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctacatagatttgggactcattggaacaattagcgaaaatgatgaagttaaa
gttgcttcagaaagttctgacagtgaggaagaggtgcaaaaagagaagaagaagaaaaag
aagatgaaaacagattttaacaacgcattttcatttgcagatcaggaggatcccttcaaa
ggatttaaaagcataaaattaaagtttgccaagaaagccgatcctaccttcacactggat
gagaagattgaagctgcaagaaagaggagaaaattacagaatggagatgatatacaggaa
gacagtgaggaggaaacaaagggagacaatccagatgaagagctggagcaagatgttgac
tcttcagatggagaatttgtagcagacactttgaggacaaaagagaagaagaagaaaaag
aagagaaagaggaaaggggagccagactcggatgaggaacaggtaggggaaaagattcag
ttttctgagcggattgacacttacgacagaaactcttccttcagcgatatgaacatctca
aggcctctaatgaaggctctgggtctgttaaacttcgagcagcccacccctatacagtca
gcgacgatccccatagctctgctgggccgggatatttgtgcatgtgccgtcactgggtct
ggtaagacagctgccttcatgttacccattctggagcgtttgctgtacaagccaaaggaa
acctcggtgacccgggttcttgttgttgtaccaactcgtgaactggcagtacaggttcat
gctgtcgccaagcagctggctaactacacaaacatacagatcacactggcagcaggtggc
cttgacttgaaagcgcaagaggctgccctgagacttggccctgacattgtgatagcgacc
ccaggtcgtctgattgaccatctacacaactcacccagtttcaacctcaacagtgtggag
atacttgtgctggatgaggcagacaggatgttggacgagtatttcgccgagcagatgaag
gaggtaatccgactctgtgcccgtacacgacagaccatgctgttttctgctaccatgacg
gaagaggtgaaggatcttgcggctgtttccttggacaagcctgtgaaagtgtttataaat
gagaatacggatacggcactggggctgagacaggagtttgtgaggatacgggccaacaga
gagggagatagggaagccattgtagcagctttgttgagccgtacattcccagaccactgc
attgtgttcatacagacaaagaagcaggcccacaggatgcaccttgtcctggggctattg
gggattaatgttggggagctccatggcaacctctcacaggcccagcgtttggatgcatta
agacggttcaaggaatcagagatagacatcttgttggccacagatcttgcagctaggggt
ctcgatatagacggcatcaaaactgttatcaactttacaatgccgaacactgtgaagcat
tatgtgcacagggtcgggagaacggctcgtgctgggaaaagtggcaggtccatatccttg
gttggtgagcaggagaggaagttactgaaggaggtcgtgaagaaggccaagacccctctg
aagactcgtatagtgccacaagatgtgatagcaaagtaccgagagcgaatctctgccctg
gagaaggacattgtggagatagagcaagcggaaaatgaggagcgggagatgagagccacg
gagaaccagatgaacaaggccactaggattctggatgagaaccagcccgaccaggggaag
aggacctggttccagtcccacaaggaaaggttggctgagaaagaggcattgagactgggt
gatttcgatagtctgcctagcaagatgaagaagaaaaaacttacaaaagatcagttgaag
cataagcctaacacaccagaagaccggtcattctttgagattcagaagtcacaacagtat
tctgccaagtttgcgaagaagacggccagacagcagaaagtgatggggatcactgactct
tcattaaataacaacaatgcaagtaaaaagaagaagaagaacaagatgaagtctgcgttt
gacaaggagctgaccaacactggccggactgctgtcaggcagtacagagcagggccatcc
tataaggagaggaaggagcttggtttagggggcaataaaaagaaatctggtcaacagaaa
aacatgaaaaggaaaagataa
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