KEGG   Mya arenaria (softshell): 128245599
Entry
128245599         CDS       T09995                                 
Name
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
maea  Mya arenaria (softshell)
Pathway
maea03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128245599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:maea03400]
    128245599
Enzymes [BR:maea01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     128245599
DNA repair and recombination proteins [BR:maea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     128245599
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C zf-CCHH BRCT_2 RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 128245599
NCBI-ProteinID: XP_052819765
LinkDB
Position
9:complement(27782430..27818139)
AA seq 947 aa
MAENRYLAGYAKLGTSSCKKCKQKIDKGALRIAKLVSNPFSEDAGDMKQWFHPPCIFETF
VRARATTKKIEDPDDVEGFSDLQQDDKDKILGLIKDLLAKAGSPSKKKTPSKPKSTPAKK
SNPVAHQDPGPSAKPDNPPPSNDSSSNGSSVLQSGKDDSFREFRRLCADIAEENSYTGKT
AIVSKFITKGSSGDGYEGNLYLLMKLLLPGVVKSVYNLNNKQLVKLYSQIFHTSQKAMLE
DLEQGDVAETVKMFFEKSTALPPQKKCTLTLQEVDKYLGELSTMTKEDDQEKVLRQIAKQ
CTGNDLKMIIRLIKHDLRINSGAKHILDALDPNAYAAFQASRDLRDVVERVVENRGDKPG
LGKKLSVRASLMTPVLPMLAEACRSVHQAMKKCPNGFYAEIKYDGERVQLHKKGSEFQYF
SRSLKPVLPHKVSHFKEFIPKAFQSGDDLILDAEVLLIDTNTGNPLPFGSLGKHKKEQFK
DANVCLFVFDCLHLNGENIMDKPIKERRKILAKEMVEIPNRIMFSEMKHITEEDDLTDMM
TRVFQEGLEGLVLKDVNSIYEPGKRHWLKVKKDYLNEGSMADSADLTVLGAFYGSGNKGG
MMSVFLMGVYDPANEKWCTVTKVGNGFDDATLDKLQTELDMVKISKKPEKVPAWLDVKKN
VIPDFVVADPKAAPIWEISGAEFSKAEVHTADGISIRFPRVTKVRDDKSWEEATDLPRLK
VLFKKSKETSDIVIPGTKGKGKAGTPVKRLQSTDSDNGNSNSTPVKSEPSTPKASHTPSK
ANPIAAPGGITKYFSPKKEPVEPATPTKTPTKRASENGSESSPAKKSRPECQYGADCYQK
NPDHLKNFYHPPKVQQTSNGSLPNVFSGAKIFLPSDLQDNKQLKRYIIAYDGEVASEFTK
TTATHSIVPKSHTGPGADCAGVCVSVDWLWKCIKTKTLQPTEAYVVK
NT seq 2844 nt   +upstreamnt  +downstreamnt
atggcggaaaacaggtacttagccggatatgcaaaacttggaacatcaagttgtaaaaag
tgcaaacaaaagattgacaaaggtgcacttagaattgccaagcttgtgtctaacccattc
tctgaagacgcaggggatatgaagcagtggtttcacccaccatgtatcttcgagacattt
gtgagagccagggcaactaccaagaaaattgaggatccagatgatgttgaagggttttct
gacctacagcaggacgacaaagataagatacttggtcttataaaagatcttctggcaaaa
gcaggttccccgtcaaagaagaaaactccttccaagcctaaatctactccagccaaaaaa
tccaatccagtggcacaccaagatccgggcccctcagctaagccggataatccgcctcct
agcaatgattccagcagcaatggttcatcagtcttacaatcagggaaggatgactcattt
cgtgagttccggcgtctgtgtgcggacatcgctgaggaaaacagctacaccggaaagact
gccattgtctccaagtttatcacaaagggttcttcaggagatggctatgaagggaacctg
taccttctgatgaaattgctgctgcctggtgtggtaaagagtgtctacaacctcaacaac
aaacagcttgtcaaactctacagccagatatttcacacgagtcagaaagcgatgttggaa
gatttggagcagggtgatgtggcggagacggtgaaaatgttctttgagaagagtaccgca
ttaccacctcagaaaaagtgtacactcactttacaagaggtggataagtacctgggagag
ctgtctacgatgacaaaggaagatgaccaggaaaaggttctacgccaaattgcaaaacaa
tgcacaggaaatgacctgaagatgattattcgtctgatcaagcacgaccttcgaattaac
tccggagccaaacatatacttgacgccctggacccaaatgcgtacgcagctttccaggct
tcccgtgatctccgtgacgtcgttgagagggtggtggagaacaggggggacaaaccgggc
ctagggaagaaactgtcggtcagggcctcactcatgacccctgtactgcccatgctggct
gaggcatgcagatcagtccatcaggccatgaagaaatgtccaaacggtttctacgccgag
ataaagtatgatggagaacgagtccagctacacaagaagggatcagaattccagtacttt
agtcgaagcctcaaacccgtcttgccccataaggtatcccatttcaaggaattcataccg
aaggcttttcagagtggagatgacctcattttggatgctgaagtcctgctgatagataca
aacacggggaatccgctgccctttggcagcctcggcaaacataagaaagagcagtttaag
gatgccaacgtgtgcctgtttgtgtttgattgtctgcacctcaacggggaaaacatcatg
gataaaccaattaaggagcgtcggaaaattctggccaaggagatggtggagattcctaac
aggatcatgttttctgagatgaaacacataacagaggaagatgaccttactgacatgatg
acccgcgtattccaggagggacttgagggacttgtacttaaggacgtcaatagcatatat
gagccaggaaagcgccactggctgaaagtgaagaaagattacctgaacgagggctcgatg
gccgacagcgctgacctcactgtcctgggggcattctacggcagtggcaataaggggggc
atgatgtctgtatttttgatgggtgtgtacgacccagcaaacgaaaaatggtgtactgta
accaaggttggtaacggcttcgatgacgcaacgctagacaagcttcagaccgagctggac
atggtcaagatcagcaagaagcctgaaaaagttcccgcctggctagatgttaagaaaaat
gtcatccccgattttgtcgtcgctgatccgaaagcagcccctatctgggaaatctctggt
gcagagttcagtaaggctgaggtgcacactgcagacggaatctcgatccggtttccccgg
gtaacaaaggtgcgggatgacaaatcctgggaggaggcgacggatttgccaaggcttaag
gttctgtttaagaagtcgaaggagacgtcagacatcgtgataccgggaaccaaaggcaag
ggcaaggcgggcacacctgtcaagaggttacagtccactgatagtgataatggaaacagc
aattccacccctgttaaatcagaaccatcaacacctaaagcatctcacacccccagtaaa
gctaaccccatcgctgctcctggaggaatcaccaaatatttctccccaaagaaggaacct
gttgaaccggctacacctacaaaaacaccaactaagcgggccagtgaaaatggcagtgaa
tcaagtccagcaaagaaatcacgccctgaatgccagtacggagctgactgttaccaaaag
aacccagaccatcttaagaacttttaccatccacccaaggtgcagcagacaagtaatggg
agtttgccgaatgttttctctggtgccaagatcttcctacccagcgacctccaagacaac
aaacagctcaagcgatacatcatagcatatgatggtgaagtagcttcagaatttaccaag
accactgctactcattccatagtgcccaaatcacacacgggtccaggtgcagactgtgca
ggggtgtgtgtgtcggtagactggttgtggaaatgtattaaaaccaaaaccctccagccg
acagaggcttacgtggtcaaatag

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