Mya arenaria (softshell): 128246166
Help
Entry
128246166 CDS
T09995
Name
(RefSeq) calcium-activated potassium channel slowpoke-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128246166
Ion channels [BR:
maea04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128246166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
128246166
NCBI-ProteinID:
XP_052820319
LinkDB
All DBs
Position
2:complement(30797443..30892377)
Genome browser
AA seq
1148 aa
AA seq
DB search
MANATTTLAPYGCSERKWHYFLASSLITFGAGLVIILLYRLSLFIFCQTKAVRRKGSLIT
PNNAIQKDTSKDFTKEKGTGLFKGHDPEVGWLTEAKDWAGELISGQTTTGRILVGLVFVL
SIASLIIYFIDASYEQVESCTPWAESTTQQVDLAFNVFFMIYFFIRFVAANDKLWFWVDK
FSVVDYFTIPPSFVAIYLDHQWLGLRFLRALRLMSIPDILTYLNILNSNTVIRLSYLVSV
FLSLWLSSGGFLHLLENSGDFFKDFVNPKPITYWECLYFLVVTMSTVGYGDIYAETILGR
LFMSIFICASIGLFASWIPEIADILGKQNKYGGSYKKERGKKHIVVCGHITYDSVANFLK
DFLHKDREDVDVEIIFVHKALPDLELEGLLKRHFTQVEFFQGTVMDAIDLERVKIKDAHA
CLVLANKYCEDPDQEDASNIMRVISIKNYHAEIKVIVQLLQYHNKAYLLNIPSWDWKRGD
DAVCIAELKLGFIAQSCLAPGFSTLMANLFTMRSYKPSVEMQQWQNDYMRGTAMEMYTEF
LSSSFNGLTFPEAAELCFAKLKLLLLAIEVRSDEGRESTLAINPGSKVKLETATQGFFIA
ESAEEVKRAYYYCKSCHSEVTDIRMVKKCRCRPSIEPSYKPKLKINPSIRITATQSQNPG
NPFTKIKKPPGGGGNIEEDAWARHKWQSSASRINRLSMPSSPSKAVHGLEREMSEVPVAP
WTTVAEKGPVQDEPRKFDSTGMFHWCRGRIIDEAIMDRNKAAMTVLCNHVVVCLFADATS
PLIGLRNLVMPLRASNFHFNELKHVVIVGNLDYLHREWKTIQNFPKVMILPGSPLNRANL
RAVNINLCDMCVILSAKDRKFDDPHLVDKEAILCSLNIKAMTFDDSVGLIQSSSPNSPGH
HTLEFLPPGFMQVTSPSKSSRRGSACGSNVPLITELANDSNVQFLDQDDEDDPDTELYMT
QPFACGTAFAVSVLDSLMSTSYFNDNALTLIRTLITGGATPELEQILAEGAGMRGGYCTP
AVLANRDRCRVAQISLYDGPLAQFGEGGTYGALFVHALRQQGILCIGLYRFRDTSSTEKS
PSSKRYVITNPPEEFKLLPTDQVFSLTPCNLSKSSAPLPNGNEKNFLSTAVHKSDEKETH
SAVPQSRA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcgacaacaactcttgcaccatatgggtgtagtgaacgcaagtggcattac
ttcctagcctccagtttaataacattcggggctggcttagttatcattttgctttacagg
ttatcactatttatcttttgtcagactaaagcggttagacggaaaggctccctaatcact
cctaacaatgcaatacagaaagatacatcgaaggattttaccaaggagaaagggacgggc
ctgtttaaaggtcacgacccggaggttggttggttgacggaagcaaaggactgggctggg
gaactcatctcagggcagacaaccacagggagaattttggttgggctggtgttcgtgttg
agtatagcgtctctcattatctacttcatcgatgcttcatatgagcaggtggagtcatgt
acgccctgggcggagagtacgacccagcaagtggacctggccttcaacgtcttctttatg
atctacttcttcatcaggtttgtagctgcaaatgacaagctatggttctgggtggacaag
ttctcggtggtcgactatttcactatcccaccctcctttgtcgctatttacttggaccac
caatggctggggttgcgtttcctcagagcgttgcggctaatgtcaatccccgacattctg
acatacctgaatatcctcaactccaacaccgtgatccgactgtcgtacctcgtctccgtg
ttcctgtccctgtggctgtcctctggagggttccttcacttgctcgagaacagtggtgac
ttcttcaaggactttgtgaatccgaagccaataacatactgggaatgtctctactttctt
gtcgttaccatgtccaccgttggctatggcgacatctacgcggaaaccatccttggccga
ctcttcatgtccatcttcatctgtgccagtattggtttgtttgccagctggattccagaa
atcgcagacatccttggcaagcagaacaaatatgggggatcctacaaaaaggagcggggc
aaaaagcatatagttgtatgcggccacatcacgtatgactcagtcgccaactttctcaaa
gattttctacacaaggaccgtgaagatgtggatgtggagatcatctttgtacacaaagcc
ttacctgatttagagttagaggggctgctgaagcgacacttcacccaggttgaattcttc
cagggaaccgtaatggacgccatcgaccttgagagggtcaagatcaaggatgcccatgcg
tgccttgtcctggccaacaagtattgtgaggatcccgaccaggaggacgcgtccaacatc
atgcgagttatctccatcaagaactaccacgctgagatcaaggtcatagtccaacttctg
cagtaccataataaggcatatttgttgaacatcccaagctgggactggaagagaggggat
gatgctgtgtgcattgctgagctcaaacttggcttcattgctcagagttgtctggcgccc
ggcttctccacactgatggctaacctgttcaccatgagatcatacaagccgtcagttgag
atgcagcaatggcagaatgactacatgcggggcacagccatggagatgtatacagaattt
ctgtcctcgtccttcaacggcctgacattccctgaggcggcagagttgtgttttgcgaag
ctgaagttgctgctgctggctattgaggttcggtcagacgagggaagggagagcactctc
gcgatcaacccgggctcaaaggtgaaactagagacggccacacagggattcttcatagct
gagtctgctgaggaggtcaagagggcctactactattgcaaaagttgtcacagtgaggtc
acagacattcgtatggtcaagaaatgtcgctgcagaccatctatagagccatcgtataag
cctaagttaaaaattaatccaagtatcagaatcactgccactcaaagtcagaaccctggc
aacccattcaccaagattaaaaagcccccagggggaggtgggaacattgaggaagatgct
tgggcaagacataaatggcagtcttctgcttcaagaataaatcgcctctctatgccaagc
agtccaagtaaggcagtccatggtctcgaaagggagatgtctgaggttccagtggccccg
tggaccactgttgctgagaagggacctgtgcaggatgagccccgcaagtttgactcaaca
ggcatgttccactggtgccgggggagaatcattgatgaggccattatggaccgcaacaaa
gcagcaatgactgttctatgcaatcacgtggttgtgtgtctgttcgctgacgccacatca
ccgctgattggtctacgcaacttggttatgccgttgcgagcgagcaatttccatttcaac
gaactcaagcatgttgttatcgtgggcaacctagattaccttcatagagagtggaagacg
atccagaactttccgaaagtcatgatcctaccaggctcgccactgaatcgagccaacctg
cgtgcagtgaatatcaacctgtgcgacatgtgtgtgattctgtcagccaaggaccgcaag
tttgacgacccacatctcgttgacaaggaggctattctgtgctccctcaacatcaaggcc
atgacgtttgatgacagtgtgggtctcatacagtcgtcctctcccaacagcccggggcat
catactctagagttcctgccccctgggtttatgcaggtgacaagcccctccaagtcatca
agacgaggctcagcctgcggttccaatgtgcctctcatcacagaacttgcaaatgactca
aatgtgcagttccttgaccaggatgatgaggatgatccagacacagagctgtacatgacc
cagccctttgcctgcggcaccgccttcgctgtcagtgtgctggactcactcatgagcaca
agttatttcaatgacaatgcacttactctgatccggacgttgataacgggcggcgcgacc
cccgagctggaacagatactcgctgagggtgcaggcatgaggggaggctactgcactccc
gctgtccttgctaaccgggataggtgccgtgttgctcagatctccctctacgatggtcca
cttgctcaatttggggagggtggcacttacggcgcgctgtttgtccatgctcttcgccag
cagggtatcctctgtattgggctgtaccggttccgggatacaagctccacggagaagagc
ccctcatccaagagatatgtgatcaccaatcccccagaggaatttaaactgctacccact
gatcaggtgttttctcttacgccctgtaacctctctaaaagttccgctcccttaccaaat
gggaatgagaaaaattttctgtctacagccgttcacaagtctgacgaaaaagagacccac
agcgccgttccccagagtcgagcatga
DBGET
integrated database retrieval system
