Mya arenaria (softshell): 128246429
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Entry
128246429 CDS
T09995
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128246429
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128246429
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128246429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
PHD_NSD
zf-RING_Vps41
C1_1
Prok-RING_1
zf-RING_4
FANCL_C
bZIP_1
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
128246429
NCBI-ProteinID:
XP_052820582
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All DBs
Position
9:complement(40980590..41011176)
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AA seq
502 aa
AA seq
DB search
MKAQCIICQELFENDDTQVVSALWCGHTFHSACLNQWLENGRTCPSCRLQVDRKKIIQRL
YFDAPEEREDDVDDSRLQNQLDNLRLEVRKAEKLKNDAVRDKEAQIDKIRRLEEQRDRFE
RDLKQEQSVSSSHLKMLKLYESQQKTLDQEKQECRRIKQKLVTLQSIDTLMNGAESDAAD
IIASTGESSGAVQSLSRQVAFLKREYEKLKLEKRQLKDHCEKLQMSDRSGGKKVQDLTKK
CEILTGQLERSEGDLKLTEKEVDFLKSKNSKLLSKLRALKSSAKLSEKSETKSSEVNTSS
SSFRDLLNESSRVHQAFAASTPKLTQPTSPQGVDLDTTPDLFTSPPLTQSQVKRVEIEPS
GSGTQTGDKTSPRLNTQRNKRPLSDDYDEDVENSAKCIKITSAAEKRSQKLKHFKSDSAI
KDNNQILNYASLNIFKKHELGARAHNKGSVVQKGFDGLGGHTTHVNAIGNPFKKPSAGSK
KSLSKLRGTPSLPKLDGYIVLD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcacagtgtattatctgccaagaactctttgaaaatgacgatacacaggtggtg
tcagctctgtggtgtggccatacgttccacagcgcctgtcttaaccaatggctcgagaat
ggacgcacatgtcccagctgcagactccaagtggaccggaaaaagattattcagaggttg
tattttgatgcccctgaagagagagaggatgacgttgacgacagtcgtttacagaaccag
cttgataaccttaggcttgaggtacgcaaagcagagaagttgaaaaatgacgcagtacgt
gataaagaggcgcagatcgacaaaatacgtcgtctggaagaacagagagatcgttttgag
cgggacctcaaacaagagcagagtgttagcagttcccaccttaaaatgctgaaattgtac
gagtcacaacagaaaacgctcgaccaggaaaaacaggagtgccggcgtataaaacagaaa
cttgttacactgcagagcatagatacattgatgaatggtgcagaatctgatgcagctgat
attattgcaagtacgggcgagagttcaggggctgtgcaatccttatcccgtcaagtggca
tttctgaaacgggagtacgagaaactgaaactggaaaaacggcaacttaaggatcactgt
gaaaagctacaaatgtcggatagatctggaggtaaaaaagtgcaagatttgacgaaaaag
tgtgaaatattgacaggacagttggaacggtcggagggtgatttgaaacttacggaaaaa
gaggtggatttcttgaagtcgaagaatagtaaattgttaagtaagctaagagccttgaag
agttctgcaaagttaagtgaaaaaagtgaaacaaaatcgtctgaggtaaatacgtcaagt
tcgagttttcgtgacttgttgaacgaaagttctcgtgttcatcaggcttttgctgcatct
actccgaaactaacgcagcctacaagtcctcagggtgtggatttagacacaaccccagat
ctgttcacatcaccccccttgactcaatctcaggtaaaaagggtggaaatcgagccaagt
gggtctggaacccaaactggtgataaaacctctcccagactgaatacacaacgaaataaa
agaccgcttagtgacgattatgatgaagacgttgaaaacagtgccaagtgtataaaaatc
acgtctgctgcagagaaaaggtctcagaaattgaaacattttaaaagtgattctgccatt
aaggataataatcagattttgaattacgcaagtttgaatattttcaaaaagcacgaactt
ggagcaagagctcataataaaggtagtgttgttcaaaaaggctttgatggacttggtggt
cacacaacgcacgttaatgccattggaaatccatttaagaaaccatctgcaggatccaaa
aagtcgttgtcgaaattgcgtggaacgccttctttaccgaagttagatggttatatagtg
ttagactaa
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