Mya arenaria (softshell): 128246622
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Entry
128246622 CDS
T09995
Name
(RefSeq) calsyntenin-1-like
KO
K22659
calsyntenin 1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128246622
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Cadherin related
128246622
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Laminin_G_3
Cadherin
Laminin_G_2
Toxin_R_bind_N
Cadherin_C_2
Amnionless
Motif
Other DBs
NCBI-GeneID:
128246622
NCBI-ProteinID:
XP_052820874
LinkDB
All DBs
Position
9:32480154..32555132
Genome browser
AA seq
979 aa
AA seq
DB search
MDKLLFYLSCTILLGLSRSTSEPNAYAPEIISTLQNSRDIPLFRGSIQEDETTVHLEPQL
FARDNDTVGAARLICRYEIVANRKNIPFEIELKNRETGEGVLKVREGEHLNFEKRKHYKF
NIFAYDCVDPPYSKRSNRAVVTVKVLDVDKFAPVFDKTTYSADLLEGTVSSNIIQVHAHD
DDRSPENSGICGYDIVSDDAPFLITNDGILQNTKSVYHTDHYSFILKIRARDCRGMVSEP
AYINIMVKEKCRNGWTDFPDHIEYTPGTGRHTLTDSAHLQVCEESCTVDRVTVKMTLQTK
HIGKGCDRDTYSIISQRKLCGASDGSVDLLPAPTLTSNWTNAIPTDDGNDGDKIYAFDGE
TNHVVVPEGHVDHTLREHFTISTWMKHSPSDGTHTKHTHSGKEHLLCMSDGDGMSRHHYA
LFIHNGKLVFVLRRESAKESDLEVFKPAEWRWKISEVDDGQWHHYAFTMNFPELHLYVDG
KLVEATQDNFEILDDWPLHPTDRVHFTKLVVGACWKGLDETYVDHFHGFVAGLSLLKDRT
ESERVIQCLNNCQENLDFTDLEDMPSGTSVSFNSDMTEFSITGRNASDVEMLVRKVAYVN
NRNFPTPGRRNLNIRTSVHCGQIEEILPLKESYIFVEHSSKPVITVTGKNLVLGHQSELD
TGLPVFKDVSIHVDFMLASNSVEDSEDESEEIGNDTSDMHDADANTSLLDNKIPAVDDSV
DSSSTKILLDMCTVRAEPVLDFYVEHLELPKDDIKTFNMKLEGIETAAGLVILNADTIEN
YMTVLHDIRYIHTQAGDLYMRKFVISCSSQSGRFVSNEFEINVGARQVEEEPRVVPVANI
QNSGAQQSIVEPKFQNHLAGAAGTNFGMVAIIVVCVGFLLFMIVLGVLRIRAAHHHRRVP
TNDNGQEMEWDNSELNIIVNPIDQELFEYEEHPHKATLPDDSDTDDDISECFQDDEDNDS
SEEEMETAVKTLEWDDSAY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggataaactgttattttatttatcgtgtacgattttgcttggattatctcgatcgacc
tcagagcccaatgcatatgctccagagataatctccacgttacaaaacagccgggacatc
ccgctgtttcggggctcgattcaggaggatgagactactgttcatctagagccacagctg
tttgctcgtgacaacgacacagtgggggctgcaagacttatatgcagatatgagattgta
gccaacagaaagaacattccatttgagattgagctgaaaaatcgtgaaacaggcgagggg
gtgctgaaagttcgggaaggtgaacatctcaactttgagaaacggaaacactacaagttc
aacatattcgcctatgactgtgttgatcccccttactcaaagagatcaaatagagcggtt
gtcactgtgaaggtgctagatgttgataaatttgctcccgtgtttgacaagacaacatac
agcgccgatctccttgagggaacagtgtcatccaacattatccaggttcacgcacacgat
gacgatcgatcacccgagaacagcggaatctgtggatacgacattgttagtgatgatgcg
ccgtttttgataacaaatgatggtattctccagaacacgaagtcagtgtaccatacagat
cactacagtttcatcttgaagatccgtgcacgagattgccggggaatggtgtcagagcca
gcctacattaacatcatggtgaaggaaaaatgcagaaatggatggacagatttcccggac
cacatagagtacacgcctggtactggtcgacacacgctgacagactccgcccacttacag
gtgtgcgaggagagctgtacggtggaccgagtcactgttaaaatgaccctacagactaaa
cacatcggcaagggatgcgatcgtgacacatacagcattatctcacagagaaaactctgt
ggtgcaagtgatggcagtgtggacctactgccggcccctaccttgacgtccaattggacg
aatgccatcccgactgacgatggaaatgatggggacaagatatatgcctttgacggggaa
acaaaccatgtcgttgtcccagaggggcatgtggatcacacgctgcgggaacatttcacc
atctccacgtggatgaaacactcaccatctgacggcacacacacgaaacacacacacagt
ggcaaggaacatctcctgtgcatgtccgacggagatggtatgagccggcatcactacgca
ttgttcatccacaatgggaagctggtgtttgtgctgcgtcgtgagagtgccaaggaatcg
gacctggaggtgtttaagccagcagagtggcgctggaagattagtgaggtggacgacgga
cagtggcaccattacgctttcaccatgaacttccccgagctgcacctgtatgttgatggg
aagctagtggaggcaacccaggacaactttgagattctagatgactggccgctacatcca
accgaccgtgttcactttacgaaacttgttgtgggagcctgctggaaaggcctagatgag
acgtacgtagaccatttccatgggtttgtggccgggctatctctgctcaaggaccggacg
gagagtgaacgggtgatccagtgtctcaacaactgccaggaaaacctcgactttaccgac
ctcgaggatatgcccagtggaacttctgtgagttttaacagtgatatgacagagttcagc
atcacaggcaggaatgcgtctgatgtagaaatgttggtacggaaagtggcatatgtcaac
aatcgcaacttccccacacctggccgcagaaaccttaacatccggaccagtgttcactgt
gggcagattgaggagattctacccctgaaagagtcgtacatctttgtggagcactcaagc
aagccagtaatcacggtgactgggaaaaatctggtgctgggtcatcagtcagagctcgac
acaggtctaccagtgtttaaggatgtgagtatccatgtggacttcatgttggcgagcaac
tcggtggaggacagtgaggacgagagcgaagagattggcaacgacacctccgacatgcat
gatgctgatgccaacacatctttattagacaataagattccagcagttgatgacagtgtg
gactcctccagcacaaaaatattgcttgacatgtgtacagtgcgtgcagagcctgtccta
gacttctatgtagaacaccttgagctgcccaaggacgacattaagacattcaacatgaag
ctcgagggcattgagaccgctgcggggcttgttattctcaatgctgacactattgaaaac
tatatgacagtgttacacgacattcgctacatccacacgcaggcaggtgacctctacatg
cgcaagtttgtcatctcatgctcctcacagagtggacgatttgtcagcaatgaatttgaa
attaatgttggtgcccgacaggtggaagaagagccaagggtggtgcccgtggcaaacatc
cagaattctggtgcccaacaaagcattgtggagcccaagtttcagaaccacttggcagga
gctgcaggcacaaactttggtatggtagcaatcattgttgtgtgtgtcgggttcctgctg
tttatgattgtgctgggcgtgttacgtatccgggcagcccaccaccatcgacgggtgccc
acaaatgataacggccaggagatggagtgggacaactctgaactgaatataattgtaaac
cccattgatcaggagttatttgaatatgaggaacaccctcataaagccacgttacctgat
gacagcgacacagacgacgatatcagtgagtgtttccaagatgacgaggataatgactct
tcagaagaggagatggaaacggcagttaaaacactcgagtgggacgactcggcgtattag
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