Mya arenaria (softshell): 128246707
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Entry
128246707 CDS
T09995
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128246707
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
maea02000
]
128246707
04147 Exosome [BR:
maea04147
]
128246707
04090 CD molecules [BR:
maea04090
]
128246707
Enzymes [BR:
maea01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
128246707
Transporters [BR:
maea02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
128246707
Exosome [BR:
maea04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128246707
CD molecules [BR:
maea04090
]
Proteins
128246707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA
AAA_22
RsgA_GTPase
Rad17
AAA_5
AAA_30
AAA_29
AAA_21
Zeta_toxin
AAA_7
AAA_14
AAA_28
APS_kinase
AAA_18
nSTAND1
AAA_24
AAA_25
DUF815
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128246707
NCBI-ProteinID:
XP_052821017
LinkDB
All DBs
Position
9:15180716..15232232
Genome browser
AA seq
1286 aa
AA seq
DB search
MSKDTKVTLSGKNGGVETKTAEADKGGDGEKKDEDIPPATMGQLFRTADCLDVTFMLLGG
LASIVHGAGWPMLFLFFGGMTDTFISGPSGNPNVTIGNKTNDELKDEFNDKMTEYSLYYV
YIGAAVFVASYIQNSMWAISCERQTHRIRKQFFRAILRQEVAWFDVHQSGELTTRLADDL
ERVREGMGDKVSFTLQFLAQFLAGYVIGFIKGWKLALVLLSLSPLLVVSSAFMGKLMVSF
SKREQDAYAAAGSVAEEVLSCIRTVTSFNGQRQDIDRYNRALEKSKAIGTKKSWISGLGM
GFVYFTMFSAYALAFWFGNEQVKDWYDSNFEGGMTPGTVLTVFFAVLIGTFSIGNIAPHA
QAIATAKGAAGKVIHIIDNKPKIDASSPIGQPVARVTGHIEFENVNFTYPTRKDVPVLKG
LNLRVEPGQTVALVGPSGCGKSTVINLIQRFYDPDQGRVLVDGQDIRSLQVAGLRRNIGV
VSQEPILFGLTIRENILLGRPDARTQEIEAAASMANCHDFITKLPKSYETLVGERGAQLS
GGQKQRVAIARALIRDPKILLLDEATSALDTESERVVQDALDKARQGRTTIVIAHRLSTI
QNADVIYVVEDGVIVESGRHADLMSQKGAYYQLVTVQMLVEEGDNGDEDDFLGEEAQDIV
ENGVPRKRTLSGGDGKVKKQVSRQISKQLSKVKEEKEKEEVEQETAPKSGFCSMLRENRK
EWPLIVLGCIAAAVNGATMPVFAVFFSEMIKVFINRGENGLFWSMMFLVLGGTQFLTLTI
QTVSFGYSGETLTKRLRLKTFNAFLRQDVAYFDDAKHSTGALTTRLATDASLVKNATGIR
IATVLQSLVGMVAALTISFIYGWQLALVVLGGVPLMVAAGAIQLKTVMGTQKKDNVDLEL
AGKTASESIENVRTVQALSREPEFYTKYTSYLETPYRTKLRMTQLQAFGFGFSSGIVFFL
YAGCFRFGAYMVTLGQMQPDDVFKVFFAIAFTGLVLGQVSSFLPDYSKAATAGGMIFKIL
DTIPAIDVSSERGQYLSDTSGNVEFRGIQFRYPTRPDVEVLKGINISVKAGQTVALVGPS
GCGKSTVVSLLQRYYDPQQGSIEVDGTNIKDVNIKRLRFLISVVSQEPILFDCSIRENIL
YGLDVASYGMDDVISAARSANIHEYIASLPEGYDTVVGEKGTQLSGGQKQRVAIARALIR
NPRILLLDEATSALDTESEKVVQAALDNAQKGRTCIVIAHRLSTVQNADYIYVIDAGNVV
ESGNHHQLLSRKGVYAQLVSGQQLAK
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggatacaaaagtgactttatccggtaaaaatggcggagttgagacgaaaact
gcggaagctgacaagggtggagatggggagaagaaggatgaagacataccccctgccacg
atgggccagctgtttcggaccgccgactgcctggacgtgacatttatgctcctgggtggt
ctcgcatcaatcgttcatggagcaggatggcctatgcttttccttttcttcggaggcatg
acagacacctttatttccggtccaagtggtaatccgaatgtgacaattggcaacaagaca
aacgacgagttaaaggatgaatttaacgacaagatgacggaatactccctctactatgtt
tacataggagctgcagtcttcgtggcttcatatatacagaacagtatgtgggcaatatcc
tgtgagcggcagactcaccggatccggaaacagtttttccgcgctatcttgcgacaggaa
gtggcgtggtttgatgtccatcagagcggggagctcactaccagacttgccgacgacctt
gaacgggtacgcgagggcatgggagataaagtaagcttcacacttcaattcctggctcag
ttcctagctggctatgtgattggtttcatcaagggatggaagctggccttggttctcttg
tcccttagtccactcctcgtcgtgagctcggcattcatgggcaagctgatggtaagcttc
tcaaaacgggaacaggatgcatacgcagccgccggaagtgtcgctgaggaagttctatct
tgtatacgcaccgtcacttcttttaacgggcagcgacaggacattgacagatacaataga
gccttggagaagtcgaaggcgatcggtaccaagaaatcgtggatttccggtttgggaatg
ggcttcgtctatttcaccatgttttcggcctacgcacttgccttctggttcgggaacgag
caagtgaaggattggtatgatagcaatttcgagggaggcatgacacccggaaccgtgctt
acggttttctttgccgtactgataggaacattttctatcggaaatattgcacctcacgcg
caagccatcgcaacagcgaagggagccgctggtaaagtcatacacattattgacaataaa
ccaaagatcgatgcaagctctccgattggtcaaccggttgcgagggtaacgggtcacata
gaatttgagaatgtcaatttcacctaccctacacgaaaagacgtccccgtgttgaaaggt
ttaaatctgagagtggagccaggacagacagtcgcccttgtaggacctagcgggtgtgga
aaatctaccgtcatcaacctgattcagcgcttctatgaccccgatcaaggacgggtgtta
gttgacggacaagacatccgttcccttcaagtagctgggctgaggcgaaacattggcgtc
gtatcccaggagcccatattgtttgggctcaccatcagagagaacatactcctcgggcgc
ccagacgcccgcacacaggagattgaagcggccgccagcatggccaactgtcacgacttt
attacaaaattgccgaagagttacgaaactcttgtcggagaacgtggcgcgcagttgtca
gggggacagaaacagcgcgttgccattgcacgtgcgcttattcgggaccccaaaatcttg
ctcctagacgaggctacatccgcgcttgatacggagagcgagagggtcgttcaggatgcg
ctagataaggcaagacagggccgcacgacgatcgttattgcccatcgcttgtctacaatc
caaaatgctgacgtcatttacgtcgtagaagatggcgtcatagttgaaagcggacgtcat
gcagacctaatgtcacagaagggggcttactatcagttggtaacggtgcagatgttggtg
gaggagggagataatggagatgaagatgactttctaggggaggaagctcaagacattgtt
gagaacggtgttcccaggaagcgcacactgtcgggaggagatggtaaggtgaagaagcag
gtttcccgccaaatctccaaacaactctcgaaggtcaaggaggagaaggagaaggaagaa
gttgaacaggagacggcgccgaagtccggtttctgctcgatgttacgtgaaaaccggaag
gagtggccgctcatcgtccttggatgcattgccgccgcagtcaacggcgccactatgccc
gtgttcgccgtattctttagtgagatgattaaggtgttcattaacagaggcgaaaacggt
cttttctggagtatgatgtttctagtcctcggtggaacacagtttctgaccctcacaata
cagacggtgagtttcggctactccggtgagacccttacgaagcgtttacgtctgaagacg
tttaatgccttcctgcgtcaagacgtcgcctactttgacgacgcgaaacattccactggg
gctctcaccacgcggcttgcaactgacgcctcccttgtgaaaaatgcaacaggtatccga
atagccacagtgctacagtctcttgtgggtatggtggcggctcttaccatctctttcatc
tacggctggcagcttgccctagtggtgctcggaggggttccgcttatggttgcagcaggc
gctatccagttaaagaccgttatgggtacacagaaaaaagacaacgtggatctagaactg
gcaggaaagacggcttccgaatctattgaaaatgtccgcactgtgcaagccttaagcaga
gagccagagttctacactaaatataccagttacctcgagacaccatacaggaccaaactt
cgtatgacgcaactgcaggcatttgggttcgggttttcttcgggtattgtgttcttcctg
tatgctggttgcttccggtttggggcctacatggtcacccttggccagatgcagcccgat
gatgtattcaaggttttctttgcgatcgcgttcaccggccttgtccttggacaggtaagc
tccttcctgccggactactccaaggcggcgactgccggtgggatgatattcaagattctc
gacacaatcccagccatagacgtgtcgtcggaaaggggccagtacctgtccgatacatca
gggaacgtcgaattcaggggcatccaattccggtaccccacgcgaccggatgttgaggtc
cttaaagggatcaacataagtgttaaagcaggtcagactgtggcccttgttggaccgagc
ggatgtgggaagtccaccgttgtctcccttctacagagatactacgacccacagcagggc
tctatagaagtagacggaacaaacatcaaagacgtaaatatcaagcgtctacgattcctg
atcagtgttgtaagccaggaaccaatcctgtttgactgcagcattcgagaaaacattcta
tacgggctggatgtggcttcatatggaatggatgacgtcatttccgccgcacggtctgca
aatatccatgaatatatcgcatcattgccagagggctatgatacggtggtaggcgagaag
gggacccagttgtctgggggacagaaacaacgggtggccattgcccgagccctcattcgc
aatcccagaattcttctgttggatgaagccacttccgctttggatacggagagcgaaaag
gtggtgcaagcggccttagacaatgcccagaagggccgaacgtgtattgtgatagcccac
cgcctatcaaccgtgcaaaacgcagactatatttacgtaattgacgccggaaacgtggtt
gagagcgggaaccaccaccagttactgagccggaaaggagtttacgcccagttggtctcc
ggccaacagttagcgaaatga
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