Mya arenaria (softshell): 128246878
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Entry
128246878 CDS
T09995
Name
(RefSeq) protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128246878
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128246878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Zn-C2H2_12
UBZ_FAAP20
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
128246878
NCBI-ProteinID:
XP_052821363
LinkDB
All DBs
Position
9:complement(65148206..65191046)
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AA seq
1420 aa
AA seq
DB search
MSQPGSVGQTAHAVFLSQQPSLHPVLQQIQQLRETFAEPPVTRATPSEDVQVLEPPASNV
DDEHGQNETISAEVFSSYLHREVLAGCKPHPGDIVEAGPLAAITPPDVHYPLADSLPAEI
IQGGKLSSLQLEGVIQACQRHQMLLPDGQRAGFFIGDAAGVGKGRQIAGVILDNFARGRT
KSIWFTISTDLIVDTRRDLGDLGCYIRVIDGCQELDKHTRVLGLPSDFKDGVVFSTYSTL
VSTVQKGAGRQTRLQQLVDWCGREEFDGCLIFDECHKAKNFVPGKEQASTKVALAVTSIQ
RMLPKARVLYCSATGVSDVKNMAFMERLGLWGEGAPYNNFEQFLVSVQKKGLGMAEILAM
EMKSAGMYLSRGLSYKQAEFVTVEAPLTKDQKKVYDMAVHLWTELRKALESALVRTGSSN
QRVWQQFWSCHQRFFKQLCLGMKVPTIISEARQALASGQCIVIGLQTTGEASLDSELERG
KGQVVGFMSLCREILQRFISTHFPTRLPPTKEGEVVEDKWCVTARNMLQDFTKRVSLPDS
PLDEIIDKLGGPSQVAEMTGRKGRIVRHSPSDSPRYEPRTPDNDAYGAIDSLNVQERNHF
MSGKKLVAIISDAASTGISLHSDLRVGNQCRRVHLTVELPWSADKAVQQLGRSHRSNQSS
GPLYKLLTTNLGGERRFAAAVARRLQSLGALTKGDRRAATGADLSEFNFDTAYGRNALRL
MYQHICQKKLVPGISLAKLTDKYDIENFHILMQESLVLMGLVDIEMMRNGLVLKDRDTSD
VSKFLNRILGLHVEKQNMIFTYFTESMKLIIQNAKKEGRYNEGMLDITAASVEMVGTPRE
IFTLFNKGHTSTRLVELNVDRGMSWEQAVTRADNYSGKYDSFYVSRRDVWGRKLFILATQ
KEGSTHLFRIARPNTGLSYMDEERTDLLHRYLPIDREKAEKGWREQYEVTMNSCVHGSHC
KNKDFCKVGSRCYSLHLLCGSIVTFMSTLEAVLNRNALKLNLSKTESSIRVVRVKCNDGT
RVVGVRYPQLLISEVEASLREQRVMETLQQTQLKFGQSGNVLQPGAQATMPFVVHPSQAQ
YSLIIGSQSPRIVPNMLDMSMSQPVGGAQSVSALPASQPLNTSDLGAMNASSPVFSDGLN
SANSRISLNSSSSAAPGEPCAKSSASDALHDEVKQLADNANAKQTVKFRGGSVTEEVSPV
SKKCLAKALNPPVTIKNFFKPKVKAESSNSRGNCDQDEEVKEREVKEDGQAGVGEKVIVS
EMSYEQFLDSGSDSKAVIRKPEGETELEAHDEHHKAKATGNVTLKEEENGSENVFTQLAE
HSKAQDILNPDAKGEGNRGFNKENTPTSLSRKRALGDPTSSSQPRKKAKQATLFSTFEKM
ASKKIVEEQKEQTCPICQKVFEKSVSNAELNNHIDNCIIE
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcccggcagtgttgggcagaccgcccacgccgtattcctctcacagcagcct
tccctccatccagtactacagcagatacagcagctgcgcgaaacatttgcagagccccca
gtgactagggcaaccccaagtgaagatgttcaagtgctggagccaccggcctcaaacgtg
gatgatgaacatgggcagaatgagaccattagtgcagaggtattttcgtcttatctacat
cgtgaggttctggcaggatgtaaaccccaccctggcgatatagttgaagctgggccccta
gctgcgataactccaccagacgtacactaccctctagcagactcactgcccgcagagatc
attcaggggggaaaactgagcagtctccagctggaaggcgttatacaggcatgccaaaga
catcaaatgctgttaccagatggacagagagcggggttctttattggggacgcagcgggg
gtggggaagggtcgacagatagcgggtgtcatactggacaactttgcacgaggaagaaca
aaaagcatctggttcacaatatcaacagaccttatagtggacacaagaagggacttggga
gatctgggctgctacatccgggtgatagatggctgccaggagctggataaacacacacgg
gttctgggtctaccctctgacttcaaggacggggttgtgttcagcacgtactctacactt
gtctccacagtgcagaaaggtgcaggccgacaaacgagactacagcaactcgttgattgg
tgtggcagggaggagtttgacggatgtctcatctttgacgagtgtcacaaggcgaaaaac
tttgtaccagggaaagagcaggccagcacaaaagttgcattagcagtaacaagcatacaa
agaatgcttcccaaggcgagagttctgtactgcagtgctacaggggtctccgatgtgaag
aacatggcgttcatggagaggcttggtttgtggggagaaggggcgccatacaacaacttt
gaacagtttcttgtctccgtgcagaaaaagggccttggtatggctgagattctggcaatg
gagatgaagtctgctggcatgtatctgtcgagagggctcagctataaacaggcagagttt
gtaacagtcgaagcccccctcaccaaagatcagaagaaggtttatgacatggctgttcat
ctctggaccgagctaaggaaggcactagagtcggccttggtcaggacaggaagctcaaac
cagcgtgtatggcagcagttttggtcatgtcatcaacgattcttcaaacagctctgtttg
ggtatgaaagttcctacaattatttctgaagcacgtcaagccctggccagtggacagtgt
attgttattggcctacagactacaggagaggccagtttggacagtgaattagagcgaggc
aagggccaggtggtcgggtttatgtcgctgtgtcgggaaattcttcagagattcatctcg
acacatttccccactcgccttcctccaacgaaagaaggggaggttgttgaggataagtgg
tgtgtgacagccagaaacatgctacaggacttcaccaagagagtctcccttcctgacagt
ccactggatgagatcattgacaaactagggggacccagtcaggtagcagaaatgaccggg
cggaagggacggattgtcagacattcgcctagtgacagcccaagatacgagcccagaacc
ccagacaatgatgcctatggggccatagacagtctcaatgtccaggagcgtaaccacttc
atgtctggcaagaagctagtagcgattatctcggacgctgcaagtacgggaatctctctg
cactcagacctccgtgtagggaaccagtgtagacgtgttcacctgactgtggagctgccg
tggagtgcagacaaggccgtacaacaactgggccgctcacatagatccaatcagtccagt
ggtcctctgtacaagctgttgaccacaaacctgggaggggagaggaggtttgcagcagcc
gttgccaggagactacagtccctaggagccctgacaaagggtgaccggcgtgcagctaca
ggggccgacctctcagagttcaattttgacacagcatacggaaggaacgccttacgtctc
atgtaccagcatatttgtcagaagaagctggttcctggtatatccctggccaagctgacg
gacaagtatgacattgaaaacttccacattctcatgcaggaaagcctggtgttgatgggc
ctggtggacattgagatgatgaggaatggcctcgtgttgaaggatcgagataccagcgat
gtttccaagttcctcaacagaatcttggggttgcatgtggagaaacagaacatgatattc
acatacttcacggagagcatgaaattgatcatacagaatgcaaagaaagaaggaaggtac
aatgagggaatgctggacatcactgctgccagtgttgaaatggttggaaccccgagagag
atctttaccctctttaacaagggacacacatctaccaggttggttgaactgaacgtggac
cggggtatgagctgggagcaggctgtaacaagagcagacaactactccgggaaatatgac
agtttctacgtttcaaggcgggacgtttggggacggaaactgttcattctagctacacag
aaggagggctccacccacttgttcaggattgcaagaccaaacaccggcctgtcttacatg
gatgaggagaggacagatcttctgcacaggtacctccccatagacagggaaaaagcagag
aagggttggcgtgagcagtatgaagtgacaatgaacagttgtgtgcatggatcccactgt
aaaaacaaggacttctgcaaggtgggcagccgatgctacagcctgcatctactgtgtgga
agtattgtgaccttcatgagcacactggaggctgtcctcaacaggaatgccctcaaactg
aacctaagtaagactgagtcctccatccgcgtggtccgtgtcaaatgtaacgatggaaca
agagtagtcggtgttagatacccgcagctactcatttcggaagttgaggcgtcacttagg
gaacaacgtgtcatggaaacccttcaacaaactcaactgaagtttggccagtctggcaat
gttctacagcctggtgcacaggccactatgccttttgttgtacatccgagtcaagcccag
tacagtctcattataggctcacagagcccaagaatagtacccaatatgctggacatgagc
atgtctcagcccgttggtggtgctcagtctgtcagtgctttgcctgcttctcagccattg
aacacatcagatcttggagcaatgaatgcttcttctcctgtattctcagatggattgaat
tctgcaaactcaagaatatctttaaattcttcatcaagtgctgctcctggtgaaccatgt
gctaaatctagtgcatctgatgctttgcatgatgaggtcaaacaacttgctgataatgct
aatgctaaacagactgtcaagtttaggggtggctctgtgactgaagaagtatctccagtg
agcaaaaagtgccttgctaaggcattgaaccctccagtgacaatcaaaaacttctttaaa
ccaaaggttaaggcagagtcaagcaacagcagaggaaactgtgatcaagatgaagaagtt
aaagagagagaagttaaggaagatggccaagcaggtgttggtgagaaggttatagtaagt
gaaatgtcatatgaacagtttcttgacagtggatctgattcaaaagctgtgataagaaaa
cctgaaggtgagactgaattagaagctcatgatgaacatcataaggcaaaggcaaccgga
aatgtgactttaaaggaagaagaaaatggaagtgagaatgtgtttacccaacttgcagaa
catagtaaggcacaagatattttaaaccctgatgcaaaaggagaaggaaataggggattt
aacaaagagaatactccaacatcactctctaggaaacgagcattgggagatccaacctct
tcttcccagccaaggaagaaggccaaacaagccacactgttctcaaccttcgagaaaatg
gcgagcaagaagattgtagaggaacaaaaagaacagacttgccctatctgtcaaaaagta
tttgaaaaaagtgtctccaatgctgaacttaacaaccatatagacaactgtataatagaa
taa
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