Molothrus aeneus (bronzed cowbird): 136553653
Help
Entry
136553653 CDS
T11621
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen04382
Cornified envelope formation
maen04510
Focal adhesion
maen04512
ECM-receptor interaction
maen04518
Integrin signaling
maen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136553653 (COL4A2)
04518 Integrin signaling
136553653 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136553653 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
136553653 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136553653 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maen04147
]
136553653 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
maen00536
]
136553653 (COL4A2)
Exosome [BR:
maen04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
136553653 (COL4A2)
Glycosaminoglycan binding proteins [BR:
maen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136553653 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
136553653
NCBI-ProteinID:
XP_066401426
LinkDB
All DBs
Position
2:complement(92518384..92660108)
Genome browser
AA seq
1692 aa
AA seq
DB search
MEVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKGSRGQPGLLGSQGFTGPPGLMGIP
GVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADGIPGHPGQPGPRGKPGHDGCNGTA
GDPGDAGTPGFSGFPGSIGVQGPKGQKGEPYIVAPEIISRHRGDPGDSGVIGFPGPPGTL
GIQGPTGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGEKGEQGSPGPPGPPGLPTRELTGV
PPDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGVVGYPGQRGLPGITGFPGLSGERGIP
GYDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRVPRKGARGDPGFPGVSGLPGDRGDEGD
RGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAYFVGPPGLPGKDGSPGIRGPPGPV
GAPGPLFGLKGREGTPGRFGMQGFPGPRGQKGPKGEEGDCTRCLLGEELRRGSTGPRGPP
GFPGTPGQPGRKGEPGDQGPHGLPGFPGAKGYSGPAGFPGRKGEKGDSLHVTTKGTKGIR
GDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDAIRGFPGDPGYPGELGPKGFPGEAGLPG
EGFPGPKGFRGPPGDQGQAGSPGSPGLPGLPGEPGQLDCGQVIEDFPRGDATEPIWSGAG
CVRPPKGSQGKPGLPGATGAKGARGFPGDPGPMGFPGLNGTRGDPGREGFPGPPGFTGPR
GDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDVFGAAAGARGDVGLPGLPGLKGAPG
DQGVPGTRGADGSPGLPGPKGDPGPQGLPGLMGLPGTPGTHGFPGPPGNRGPDGGPGSQG
PLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGLPGIRGVTGPPGISGMDGFPGDKG
LKGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGAQGDKGSQGARGFKGDRGDQGPPGDPP
KLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGLPGKTGTPGSPGHPSYVAGVKGDI
GAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPGISGHFGTPGSHGEIGDRGDTINL
PGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIEGLKGTQGVPGSVGQEGLPGLVGP
PGQQGSPGTPGLTGQKGAPGWPGLPGQAGQPGFRGISGLHGLPGTKGLPGSPGPDGYGSA
GFPGAVGDKGEAGEPSRVEGSRGPPGQKGERGVPGVPGSFGIPGQEGFPGPPGISNISGY
PGDKGSPGLDGVPGYPGPQGQPGTPAPPGSKGESGETGRTGEIGPKGSRGDPGLSGRPGL
PGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDRGVTGFQGPPGSPGRAPDPPRLVA
EQGSPGPRGSIGPQGSPGDMGPQGPPGDPGFRGSPGEPGLQGRGGIPAPPGSRGEQGGMG
FQGPVGFEGQPGRPGSPGPPGMPGRSVSMGYLLVKHSQSDQEPMCPVGMNKLWSGYSLLY
FEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVA
EEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLWIGYSFLMHTAAGDEGGGQS
LVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIDQPFQSKPSGDTLKAGLIRS
HISRCQVCMKNL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgtgctgtcagccgtcaaagtggacgctggtggaaagaaatacacaggacca
tgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaaggaagccgtggc
cagccaggactccttggatcacagggattcactggaccaccgggattgatggggatccca
ggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaataactggaccc
aaaggagaagtgggacaaagaggagtcactggattccccggggcagatggcattcctggt
catccaggccagccaggaccaagggggaaaccaggtcatgatggctgtaatgggacagca
ggtgatcctggtgacgcaggaactcctggattctctggtttccctggtagcattggagtc
caggggcccaagggccagaagggggagccgtacatagtggcgccggagatcatcagccga
cacaggggagatcctggggattcaggggtcattggttttccaggacctccgggtacgctg
ggtattcaaggacctactggtccaagaggacagcgaggaagaccaggaccaccaggaccc
ccagggcccccaggaccacaaggcaacaggggacttggcttctatggagaaaaaggtgaa
cagggctctccaggtcctccaggtccacctgggcttcctacaagagaactgacaggtgtc
ccccctgacaagcacaagggtgaaagaggagaccctggaccaagaggagaagctggaatt
ccaggtgttcttctctttcctctcgaaaaaggtgaagaaggggtagtgggctacccagga
caaaggggactgcctggcatcactggttttccaggactcagtggagaaagaggtattcca
ggatatgatggtccacccggtggccatggtcccagaggaagcaagggggagcctggcgag
atgggtcctccagggccagattcctatttcccttcccgcgtcccaaggaaaggtgcaaga
ggtgatccaggcttcccaggtgtttctggactcccaggagacagaggagacgagggagat
cgtggattgcctggtcttcctggattttctgatgcggatggggataagccaggcttacct
ggagaaatgggaccaaaaggtgaaaagggtgaaattggatctcctgcttactttgtggga
ccgcctgggcttccgggcaaggatggctcacccggaattcgtggtccacctggtcctgtt
ggagcccctggtcctctctttggattaaaaggacgagagggaacacctggtagatttggt
atgcaaggtttccctgggccaagaggacaaaaaggacctaagggtgaagaaggggattgc
actagatgccttttgggtgaggaactcagaaggggctctactggcccccgtggccctcct
ggctttccaggaactcctggccagcctggaaggaaaggagaacctggtgatcaaggacca
catggtcttcctggcttccctggagcaaaaggatattcgggtccagctggatttcctgga
cggaaaggagaaaagggagactctttacacgtaactacaaaaggcaccaaagggatccga
ggagaccctgggctgcctggaatcagaggtgaggatggtttcccaggcagagatggattg
gatggtttaccaggacagcctggccttccgggtgatgctatcagaggtttccctggggat
cctggttatccaggtgaattaggcccaaagggctttccaggagaagcaggcctgccaggt
gaaggatttcctggtccaaaaggcttccggggtcctccaggtgaccaaggacaagctgga
agcccaggatctccaggtctgcctggtctgccaggggagcctggccaactagactgtggg
caggtcattgaagactttcctagaggagatgcaaccgaaccaatatggtcaggtgcaggc
tgtgtaaggccaccaaagggatcccaaggaaagccaggattgccaggagccacaggtgca
aaaggtgcaagaggattcccaggtgatccaggtccaatgggttttccagggctaaatggt
acacgaggtgatccaggtcgggaaggattcccaggtcctccaggtttcactggacccagg
ggagacagaggcccaaatgggctacctggactgcagggacacccaggccttacaggaaaa
tctggagctccaggagcaccaggaccgaagggccttcctggtgatgtttttggagcagca
gcaggggcccgaggggatgtcggcctccctggcttgccagggctgaaaggtgcaccagga
gatcaaggagtaccaggaactagaggagcggatggtagcccaggtttgccaggacccaaa
ggagatcccgggccacaaggtctccctggtttgatgggattaccaggaacaccaggaaca
catggattcccaggtccaccaggaaaccgtgggccagatggtggccctggctctcaagga
cctctcggtccacctggtgctaggggagaagatggtgagcaaggttttcctggccccgtg
ggactgaagggtctgtctggtgacaaaggtgacatgggtcacacaggactgccaggtata
cgtggtgtgactggtccccctggcataagtggaatggatggctttccaggagataaaggc
ttgaaaggttcacctggcattgatggtttcaaaggcatgacaggcctaaaaggaagacca
ggcatcaagggaatcaaaggagaatttggcccacttggggctcagggagataaaggctca
cagggtgcacgtggcttcaaaggtgaccgtggggatcaaggccccccaggagaccctcca
aagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgttggagaaagg
ggcacaaagggattctttggcttaaaaggtagcaagggaatgccaggccttcctggaaag
acaggaaccccagggtcccctgggcatcccagctacgtggctggtgtgaaaggagacatc
ggcgcgaaagggctgacaggcgtgaaagggtatcctggtcctgctggttctcctggcatc
agaggcttccctggcaccacaggagtcagaggagaaaagggcattccaggaatttcaggc
cattttggtactcctggctcacatggagaaataggtgatcggggagatactataaactta
ccaggaatgccaggcctgaaaggggaagttggtgtgccaggcttaacaggcataagagga
ggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggaattgaaggcctcaag
ggcacacagggtgtccctggctctgtgggacaggaaggtttgccaggactggttggcccc
ccagggcagcaaggaagccctggcactcctggacttacaggtcaaaagggagctcctggc
tggcctggcttaccaggacaagcaggccagcctggcttcagaggaatcagtggactgcat
ggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtacggctctgca
ggtttcccaggtgcagtgggggacaaaggagaagcaggagagccaagcagagtagaaggc
agccgaggacctccaggccagaagggagagagaggtgttccaggagtcccaggatccttt
ggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatatatcaggatat
cctggtgataaaggctccccaggtctagatggagtaccaggctatccaggaccacagggg
cagcctggaacacctgctccaccaggaagcaaaggtgaaagtggagaaacaggtaggact
ggagaaatcggcccaaaaggaagcagaggtgatcctggattatcaggaagacctggcctg
cctggattccctggaccaaaaggtcccaggggtgaacaaggtgtcattggctttatgggc
acagtaggatttccaggtgacctgggacccattggacccaagggggatagaggagtaacg
ggcttccagggacctccaggctctcctgggcgagcccctgatcctccaaggctggttgct
gagcaaggttcaccgggtccccgtggaagtataggacctcagggaagcccaggagatatg
ggacctcagggcccaccaggagatccaggtttcagaggctcaccaggagagccaggactc
cagggcaggggtggcattccagctcctcctggctccagaggggaacaaggaggaatggga
tttcagggtccggtgggatttgaaggccagccaggccgccccggcagccccgggccccca
ggcatgccgggccgcagtgtcagcatgggatacctgctggtgaagcacagccagtccgac
caagagccaatgtgcccagtgggcatgaacaaactctggagtggatacagcctgctgtat
tttgaaggacaagagaaagcacacaaccaggatctagggctggctggctcgtgtttgtct
cgctttagcaccatgccattcctctactgtaaccctggggacatttgttactatgcaagt
cgaaatgataaatcctactggctctcaaccacagcacctctcccaatgatgcccgtggca
gaagaagacattaagccatatatcagtcgctgctcggtctgtgaggccccagctgtggca
attgctgtccacagccaagaagcttctattcctcactgccctgaaggctggcgcagtttg
tggatcggatattccttccttatgcacactgctgctggtgatgaaggtggaggacagtcg
ctggtttctcctgggagctgcctggaagatttcagggcgactcctttcatcgaatgcaac
ggcgcccgcggaacctgtcactactttgcaaacaaatacagcttctggctcaccaccatc
gaccagcccttccaaagcaagccctcgggagacacgctcaaggcaggactcatccgaagc
catatcagcagatgtcaagtctgtatgaaaaacttatag
DBGET
integrated database retrieval system
