Molothrus aeneus (bronzed cowbird): 136554607
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Entry
136554607 CDS
T11621
Name
(RefSeq) transcription factor SOX-17-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136554607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maen03000
]
136554607
Transcription factors [BR:
maen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136554607
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Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
136554607
NCBI-ProteinID:
XP_066402791
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All DBs
Position
1:113609282..113610844
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AA seq
414 aa
AA seq
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MSSPDAGYASSDDQVQGRCSLPIMMPAMCPWAAEALSPLGEAKAKGGAAASGPSGGRSKG
EARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLSEKRPFVEEAERL
RVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAAAAAAAGPGLGSEVSGGGGRM
CVEGLGLAYGEQGFAAAAAGAGHYRDCPPLGAAFDGYGLPTPDSSPLDAAESEASFFAAG
LQEECALVPYGYGPHPAAAEYPAAAAAAAAASESPSGASLRRHLAPGEALGAGGSLQGLL
GCPAPLHAYYGQCQPPGAGRGPPLPPGAVGQPSPPPESAPCREQLEQLRPEELLGEVDRT
EFEQYLRFACKPELGLPYGGHEAAALSAPEAAAPISSAVSDASSAVYYCGYPDL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccaggtgcaggggcggtgctcg
ctgcccatcatgatgccggccatgtgcccgtgggcggcagaggcgctgagcccgctgggc
gaggcgaaggcgaagggcggcgcggcggcgtcggggccgtcgggcggccggagcaagggc
gaggcgcggatccggcgtcccatgaacgccttcatggtgtgggcgaaggacgagcgcaag
cggctggcgcagcagaacccggacctgcacaacgccgagctcagcaagatgctgggtaaa
tcgtggaaggcgctgtcgctgtcggagaagcgtccgttcgtggaggaggcggagcggctg
cgggtgcagcacatgcaggaccacccgaactacaagtaccggccgcggcggcggaagcag
gtgaagcgcctgaagcgggtggagagcggcttcctgcagcacggcctggccgaggcggcg
gcagcggcggcggcggggcccgggctgggcagcgaggtgtccggcggcggcggcaggatg
tgcgtggagggcctgggactggcgtacggcgagcagggcttcgcggcggcggcggcgggc
gcgggccactaccgggactgtccgccgctgggcgccgcgttcgacggctacggcctgccg
acgccggactcgtcgccgctggacgcggcggagagcgaggcgtccttcttcgcggcgggg
ctgcaggaggagtgcgcgctggtgccctacggctacggcccgcacccggcggccgccgag
tacccggcggcagcagcagcagcagcagcggcgtccgagagcccgtcgggcgcgtcgctg
cggcggcacctggcgcccggggaggcgctgggcgcgggcgggtcgctgcaggggctgctg
ggctgcccggcgccgctgcacgcctactacgggcagtgccagccgccgggagcggggcgc
ggcccgccgctgccgccgggcgccgtggggcagccgtcgccgccgccggagtcggcgccg
tgccgggagcagctggagcagctgcggccggaggagctgctgggcgaggtggaccgcacg
gagttcgagcagtacctgcgcttcgcctgcaagcccgagctggggctgccctacggcggc
cacgaggcggccgcgctgtcggcgcccgaggccgcggctcccatctcgtcggccgtgtcg
gacgccagcagcgccgtctactactgcggctaccctgacttgtga
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