Molothrus aeneus (bronzed cowbird): 136554681
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Entry
136554681 CDS
T11621
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
maen Molothrus aeneus (bronzed cowbird)
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maen04121
]
136554681 (SHPRH)
Enzymes [BR:
maen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136554681 (SHPRH)
Ubiquitin system [BR:
maen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136554681 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
VPS18_RING_C
TPR_2
TPR_12
SLX5_C
TPR_10
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
136554681
NCBI-ProteinID:
XP_066402934
LinkDB
All DBs
Position
3:47424323..47472101
Genome browser
AA seq
1695 aa
AA seq
DB search
MSGRRKRAPPSKVDEEKKKKLCWNMHEDRRNEMVALDDEVTNEDHIPVPSTSASFIVIND
DSTDEDLVQKEGSGSKSVKFLTVNDEEDSYSILTPVSVQLNIIVLPYRADRSWKALLGEF
ALHLPSEQILTDEFHDRSFTLMRGDSDDELQVCVHERSEDEHSNETKEYLGAYEQRILVE
ATLSGEILEDLRWLQKKKIIGLYQRPGEAQALKVGIYLLESGLSKPEFLSDGGGRPKKAN
QIIQKLMEKFYSFLIPDELEEDEEESDTELERQNIEELYDFVRHTHQQDIQLLRKDVQHP
ALIPILRPYQSEAVNWMLHRENHTSTPSSENVLHFLWREVITLDGKKIYYNPFTGCIIRE
YPTAGPQWPGGILADEMGLGKTVEVLALILNHTGPEIKQDDLTLPEGKLVNFFVPPQPLE
GNKKKKTKEMDPKLKEKIQYPSLRVMILAAVKEINVKKGASIIAIFKYISSIYRYDTQRN
RRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKKRERAKEQVARTSENTQKKQL
IDAKTQTKESRNSDETSENVFETASHENIAMEEHDYCTSSKNNRKSEADHENSVEEKNVK
QETVVPKSPDVHGNHFVSSDMSSRPDVDVSKTTAVIQQEVPKVQSSHSQERAGSNVQHTS
SIFPFNTSEYRFECICGELGLADYKARVQCLKCYLWQHAECVNYKEENLKSRPFYCPHCL
VAMKPVPTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEV
VITTYDVLRSELNYVDIPHSNSKDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECT
TAKAAEMALRLSGVNRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRK
NPRPLYSLIAKIMWRSAKKDVLDQIQIPPQTENIHWLHFSPVERHFYHRQHEVCCQDALA
KLRKISDWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLAS
LQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQ
RLHSTHNLMELLAKHPGIPPTLRDSRLAEEAEQLRQHYMSKSNAEVAEAHQALQPVLQTI
RELQRKIHSGSPWWLDVIQTAIQYAIDEELVQRVQNEITCNYKQETSKLSMAEKFRDCRG
LQYLLTTQLDEVKKFQKIVREAVKNLEGPPSKQVIEAATICHLRPVRLPLNNCVFCKADE
LFTEYESKLFMHSVKGQMAIFEEMIEDQEGLVDDRLPTTSRGLWATSETERALKALLSFA
KAHRMDARVTEEGSIFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPD
EPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVN
PEPCPICARQLGRQWAVLTCGHCFCNECIAIIIQQYSVGTRRSSIKCAICRQTTSHKEIS
YVFTAEAANQEDDIPVKGSHSTKVEAVVRTLKKIQFKDPGAKSLVFSTWQDVLDIISKAL
YDNNMVFSQINGISKFQENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILNP
AHELQAIGRVHRIGQTKSTIVHRFLIKATIEERMQTMLKTVDRSHTSSSMKQSEASVLTV
ADLADLFTEETEELE
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtcggaaacgtgcacctccatccaaagtcgatgaggagaagaaaaaaaag
ctctgctggaatatgcatgaagaccggagaaatgagatggtggctttagatgatgaagta
actaatgaggaccatattccagttccaagcacttctgcatccttcattgttataaacgat
gatagcactgatgaagatcttgtacagaaagaaggcagtggctcaaaatctgttaagttt
ttgacagttaatgatgaagaagactcttattccatcttgactcctgtgtctgtacagcta
aatattatagtcttgccataccgtgcagataggtcttggaaggctttgttgggagaattt
gctcttcatctgccttctgagcaaattctaactgatgaattccatgacaggagctttact
ctaatgagaggagactctgatgatgagctgcaggtctgtgttcatgaaagaagtgaagac
gagcacagtaatgagacaaaagagtacctgggcgcttatgaacaacgtattcttgtggaa
gcaactttaagtggtgaaatattggaagatttgcgatggttgcaaaagaaaaagataatt
ggactttatcaaagacctggagaggctcaggctttaaaggttggaatttaccttcttgag
tctgggctaagtaaaccagaatttctcagtgatggaggtggaagacccaaaaaagctaat
cagattattcaaaaactcatggaaaagttctacagttttttaattccagacgagctggag
gaagatgaggaagaatccgacacagaactagagcgacaaaatattgaagagctttatgac
tttgtacggcacacccatcagcaggatatccagttactgagaaaggatgtgcagcatcct
gcattgattcccattctgaggccataccaaagtgaggctgtgaactggatgcttcaccga
gagaaccacaccagtactccaagtagtgaaaacgtgctgcacttcttatggcgggaggtg
atcactctggatggaaaaaaaatctactataatccgtttactggctgcattatccgtgag
tatccaactgctggaccccagtggcctggaggtattttggcagatgagatgggtcttgga
aaaacagtggaagtgttggctcttattctgaatcatactggaccagagattaaacaagat
gatctgacattacctgagggtaagcttgtgaacttctttgttccacctcaacctttagag
ggaaataaaaagaaaaaaacaaaggaaatggatcctaaactaaaggaaaaaatacagtat
cccagcttacgagtaatgatattagcagctgtaaaggaaattaatgtgaagaaaggagca
tccataattgcaatatttaagtacatcagttctatatatagatacgatacgcagagaaat
agacggcttctcaaaagaactctagaaaaactaattgctgaacaggtggtagaacaagtt
aaagggcatggtctggctgggtccttcaagctggggaagaattacaaggaacagaagaag
cgagaaagagccaaagagcaggtagcaaggacttcagaaaacactcagaagaagcaattg
attgatgctaaaactcaaaccaaagaatcaagaaacagtgatgaaacatctgaaaatgtc
tttgaaactgcttcacatgagaatatcgccatggaagaacatgattactgtacaagtagt
aaaaataacaggaaatctgaagcagatcatgagaactctgtagaagagaagaatgttaag
caagaaactgtggtcccaaaatctcctgatgttcatggcaaccactttgtctccagtgac
atgagcagtcgtcctgatgttgatgtttctaaaactacagctgttatccagcaggaagtc
ccaaaggtccagtcctcacattcccaagaacgtgctggcagtaacgtacaacataccagt
tccatatttccatttaatacctctgaatatcgttttgaatgcatctgtggtgagcttgga
ttggctgactacaaagctcgtgtgcagtgcctgaaatgttacctgtggcagcatgcagaa
tgcgtaaactacaaagaggagaacctgaagagcaggcccttctactgtccccattgcctt
gtggcaatgaaaccagttcctacaagagcgactctgataatttctccaagttctatttgc
caccagtgggtagatgagatcaataggcatgtaagatcatcatctcttcgagttctggtg
taccaaggcgtgaagaagcacggctttttgcagccgcacatgctggcggagcaggaggtg
gttatcaccacctacgacgtcctgcgctccgagctgaactacgtggacattccccacagc
aacagcaaggacgggcgccgcttcaggaaccagaagcgctacatggccatccccagcccc
ttggtggcagtggagtggtggaggatctgcctcgatgaggcacaaatggttgaatgcacc
actgcaaaggctgctgagatggcactccgtttgagtggagtcaatcgctggtgtgtcagt
ggcactcctgtgcagcgaggattagaagatttgtatggattagtccttttccttggagtt
gatccttactgggtcaaacactggtgggaccagctactatatcgaccttattgcaggaaa
aatcctcggcctctctacagtctaattgccaagatcatgtggagatcagcaaagaaggat
gtgcttgaccaaattcaaatcccccctcagacagaaaatatacactggcttcacttctct
cctgtggagagacacttctatcatcgccagcacgaggtgtgctgccaggatgcattggca
aaactcaggaagatttcagactggactcttaagcttagcagcctagatagaaggactgtg
acttctattctataccctttgctacggctcaggcaggcctgctgtcacccacaagctgtt
cggggagagttcttgccactacagaaaagcaccatgaccatggaggagctgctggcctct
ctgcaaaagaagtgtcgaacagagtgtgaagaagctcaccgacagttggtgtgtgctctc
aatggcttagctggtatccatatcattaaaggagaatatgcattggctgcggagctgtac
agagaagtactaagatcatctgaagagcacaaagaaaagctcaaaacagattccttgcaa
agacttcattctacacataatttgatggaattgttggcaaagcacccaggaattccccca
actttgcgtgatagccgacttgcagaagaggcagaacaactccgacagcattatatgagt
aaatccaatgcagaagttgcagaagcccatcaggccttacagccagttcttcaaaccatt
cgggaacttcaaagaaagatacattcaggttctccttggtggttggatgtcatccagaca
gcaatacagtatgccatcgatgaggagcttgttcaacgtgtgcaaaacgaaattacctgc
aactacaaacaggagacaagtaaactctctatggcagagaaattccgtgactgcagaggc
cttcaatacctactcacaacccagctggatgaagtgaagaagttccagaagattgtaaga
gaagcagtgaaaaacttagaagggcctccttctaagcaagttattgaggctgccactatc
tgccatttgcgacctgttagactgccacttaacaactgtgtcttttgtaaggctgatgaa
ttgttcacagaatatgagtcaaagctctttatgcatagtgttaaaggccagatggcaata
ttcgaggagatgatagaagaccaagaagggcttgtcgatgaccgtttgcccaccacaagc
agaggcctctgggcaaccagtgaaactgagcgtgctttgaaagctcttctttcctttgcc
aaagctcatcgaatggatgctagggtaactgaagaagggagcatattcctggaactcttt
gaagcatggaaaaaggaatataagttacttcatgagtattggatggtgcttagggatcat
gtgtctgctattgatgagctggccatggcaacagagcgactgagagtgcgtcaccctgat
gagccaaaaccaaacccaccagtgctccacatcatagagccacatgaggtggagcaaaat
cgagtgaaacttctgaacgacaaggcagttgccaaatcacaacttcaaaagaaattagga
caacttctgtacctcactaatctggaaaaatctcaggacaaaactactggaggagttaac
ccagaaccatgtccaatctgtgcacgccaactgggaagacagtgggcagtgctgacgtgt
ggacactgtttctgtaatgagtgcattgcaatcatcatccagcagtacagcgttggcacc
cgccgcagctccattaaatgtgccatttgcaggcagaccacatctcataaagaaatatct
tatgtcttcactgcagaagctgcaaatcaggaggatgatattcctgtaaagggaagtcac
tccaccaaagtggaagctgtggtccgaacactgaagaaaattcaatttaaagatccgggg
gctaagtccttagttttctcaacgtggcaagatgtgttggatataatttcaaaagctttg
tatgacaacaacatggttttttctcagatcaatggaattagtaaatttcaggaaaacctg
tctgcatttaaatatgatcccaacatcaatattttgctgctgcctcttcacactggttcc
aatggactgaacatcattgaagcaactcatgttctactcgtggagcccattctgaatcca
gcacacgagctacaggctattggcagagtacatcgtattggccaaaccaaatctacgatt
gttcataggttcctgataaaagcaacaatagaagagagaatgcagactatgctgaaaact
gtagatagaagccacacaagctcttccatgaaacagtcagaagcctcagtgttgacagtg
gcagatttggctgacctttttacagaggaaactgaagaacttgagtaa
DBGET
integrated database retrieval system
