Molothrus aeneus (bronzed cowbird): 136555731
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Entry
136555731 CDS
T11621
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
maen Molothrus aeneus (bronzed cowbird)
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maen03019
]
136555731 (HTT)
04131 Membrane trafficking [BR:
maen04131
]
136555731 (HTT)
03029 Mitochondrial biogenesis [BR:
maen03029
]
136555731 (HTT)
Messenger RNA biogenesis [BR:
maen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136555731 (HTT)
Membrane trafficking [BR:
maen04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
136555731 (HTT)
Mitochondrial biogenesis [BR:
maen03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
136555731 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
136555731
NCBI-ProteinID:
XP_066404785
LinkDB
All DBs
Position
4:complement(64250821..64332666)
Genome browser
AA seq
3095 aa
AA seq
DB search
MATMEKLTKAFESLRSFQQQQGPAALPEEPLQRPKKELAATKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYAWLLNV
LLGLLVPVEDDRPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTACGGIAQVSVSKDEPASR
SRSGSIVELIAGGGSSCSPVLARKHKGKVLLGEEEGLDDDSETRSDVSSASFAASVKGEI
TSELASSSGVSTAGSVGSSAADATGHDIITEQPRSQHTLQSEPVELPSCDLTSAAAEGEE
EEVLSRSSSQISAVQSDATMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA
EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSLALQQSHLLKTMSHSRQPSDSSVDR
FTSKEDAADAGEHENKPSRVKGDIGHYTDRDCAPLVHCVRLLSASFLLTGDKGALVPDRD
VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAMGEEYEEQYVSDVLNYIDHGDPQIR
GATAILCGTIVNSILIKSRFDVEKWLINVRNTTGNLFSLIDCIPLLQKTLKDESSVTCKL
ACTAVRHCIMSLCSSSYSELGLQLIVDLLALKNSSYWLVRTELLETLAEVDFRLVNFLEG
KTESLHRGIHHYTGLLKLQERVLENVVISLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG
QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRAYRGYNMLPSPTDVTMENNLSRV
IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSSSDEAQKGCAIG
MAGLVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPRCLKNPWSAEEDANQGAAKQEEP
WPALSDRALVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG
KERESVEQASVPMSPKKSGEASPASRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKA
THANYKVTLDLQNTNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP
TMATVCVQQLLKTLFGTNLASQYDGSSSNPSKAQGKAQRLGSSNLRPGLYHYCFMAPYTH
FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSISSAAKHRADKNAIHNHIRLF
EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG
QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI
VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR
LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS
VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRCGENNMSTPE
DHTEVKQVKYPPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI
HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCHILLLVN
YTNYNWWSEVHQTPKRHSLSTTKLLSPHISGDSDESDLESKRGMCNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL
AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL
QNSIAQLPVEELDRIQEYLQNSGLAARHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG
EDQPPLENVVLDKDWYVSLVRSQCYIRSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSL
LAPCLSLGMNEISREQKSSLFETAWRVTLDHVSSAVQNLPANHQVFQPLLPTEPSAYWKK
LSDIFGDEVMYQSMMTLCRALAQYLLLLSKLPAGLRVPPDKEGDILKFVVMSVEALSWHL
VHDQIPLSVDLQAGLDCCCLTLQQPSLWNLLSSAAHVTYACSLINCIRFIIEAVAVEPGN
QLLSPERKNTSKPLSEGESDSNVQKTKHIIAACEMIAEMVECLQTVLSLGHKRNSSIPAF
LTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPSGDFGTVFPEIPVEFLQEKEIFK
EFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAIT
SLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRDN
IATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGNN
ITPLREEEWGEDEEDENDVPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPSN
PSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPATC
KAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPIIS
EYLLSNLRGVAHCVNIHNQEHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGND
ESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCMY
TGKEKISPSRIPDANPGAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDDF
FPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRT
PVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEEL
DRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC
NT seq
9288 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgacgaaggccttcgagtcgctgcgctccttccagcagcag
cagggccccgctgccctccccgaggagccgctccagagaccaaagaaagaacttgcagct
accaagaaagatcgagtgaatcattgtctaacaatatgtgaaaacatagttgctcagtct
ttaaggaattccccagaatttcagaagctgctgggcattgctatggagctctttctcctc
tgcagtgaggatgcagaatctgatgtccgaatggttgcagatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcccaggttacagttagaactctataaagagatt
aaaaagaatggtgcttcaagaagtctgcgtgctgcactctggagatttgctgagcttgcc
cacctagttcggcctcagaagtgcaggccatacctggtgaaccttttgccctgtctgaca
cggatcagtaagagacctgaggagtcggtgcaggagactctggctgcagcaatacccaaa
atcatggcagcctttggcaattttgcaaatgacaatgagattaaggttttgttgaaggct
ttcatagctaatcttaaatccagttcccccactatccgtcgaacagcagcaggatcagca
gtgagcatctgccaacattcacgaagaacacagtatttttatgcctggttattgaatgtg
cttttaggcttgttggttcctgtagaagatgatcgtcctactcttttaattctgggtgtt
ttacttacactaaggtatctcatacctttattgcaacaacaagtaaaagataccagcctg
aaaggcagttttggtgtaactaggaaagaaacagagatttcaccttcaccagaacaactt
atacaggtttatgaactgactctgcactacacccagcatcaggaccataatgttgtgact
ggagctttagaattgctgcagcagctctttcgaactcccccccccgaactgctccatgcc
ctgactgcctgtgggggcattgctcaggtcagtgtatccaaagatgaacctgccagcagg
agccgcagcgggagcattgtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgcaagaaagcataaaggtaaagtacttcttggtgaagaagaaggcttggatgatgat
tctgaaactcgatctgatgtcagctctgcatcatttgcagcttctgtgaagggtgagata
accagtgagctggcttcttcatcaggagtgtcaacagctgggtcagtggggagctcagct
gcggatgccacaggccacgacatcatcacggagcagccgcgctcgcagcacacgctgcag
tcagagcccgtggagctgcccagctgtgacctgacaagtgcagctgctgaaggggaggag
gaggaggtgctcagtcgaagctccagccagatcagtgctgtccagtcagatgccaccatg
gatttgaatgatggcacacaggcttcctcaccaattagtgatagctctcagaccactaca
gaaggtccagactctgctgtaaccccttcagacagctctgaaattgttttggagggtgct
gaaggacagtattctggaatgcaaattgggcagctgcaggatgaggaagatgaagctgca
aatattctccaagatgattcgtcagagtccttcagaaattcttctcttgctcttcagcag
tctcacctgctgaaaaccatgagccatagcaggcagccctctgatagcagtgtggatcga
tttacatccaaagaggatgcagcagatgctggtgaacacgagaacaagccctccagggta
aagggggacattgggcactacactgacagagactgtgctcctctggtgcactgcgtcagg
ctgctgtcggcctccttcctgctcactggggacaaaggagctttagttcctgatagagat
gtgagagtcagtgtaaaagccttggcagtaagttgtgttggagcagctgttgcacttcac
cctgagtctttcttcagcaaactgtataaaacacctctggaggcaatgggagaagagtat
gaggagcaatatgtgtcggatgttctgaactatattgaccatggggatccccagattaga
ggagctactgccattctctgtggaacaattgtcaactccattctaattaaatctcgcttt
gatgtggaaaaatggctaataaatgtcagaaacacaacaggaaatctcttttccttgata
gactgcatacctctgttacagaaaacattaaaggatgagtcctctgttacatgcaaactg
gcttgtacagctgtgaggcattgcatcatgagcttatgcagtagcagttacagtgagcta
ggtttgcaattgattgttgacctccttgctctgaagaacagctcatattggcttgtaagg
acagaacttctggaaacacttgcagaggtggattttcggttagtcaacttcttggaagga
aagactgagagcttgcacagaggtattcatcattatactggtctattaaagcttcaggag
agagtacttgaaaatgttgtaataagtctgcttggagatgaagatccaagagtgagacac
gtggctgcagcttcattaatgaggcttgttccaaagctgttttataactgtgatcaagga
caggctgacccagtggtggcagtagcacgagaccaaagcagtgtctacctgaaactcctc
atgcatgaaacacagcccccatctcactttgcagtgagcactatcaccagagcatacaga
ggttacaatatgctgccaagtccaacagatgtcactatggaaaacaacctttcaagggtt
attgcagcaatttcccatgcactgacaatatccactacaagagcactcacgtttggctgc
tgtgaagctttgtgtcttctctccacaacatttccagtgtgcacctggagtgtgggatgg
cactgtggtgtttcccagccaagttcttcagatgaagctcagaagggctgcgccattggt
atggctggcttggtcctgtctctcctttcatcagcttggttccccctggacctctcagca
catcaggatgctttgattttgactggaaacttgcttgcagcaagtgctcccaggtgctta
aagaatccttggagtgctgaagaagatgcaaaccaaggtgctgcaaagcaggaggagccc
tggccagctctgtcagatcgagctctggtcactttagtagaacagctcttttctcatctg
ctgaaggtcatcaatatttgtgcacatgtgatggatgatgttgctcctggtccagctgta
aaggcagcattaccttctctcacaaacccaccttctcttagtccaattcggagaaagggg
aaggagagggagtctgtggaacaggcatctgtgcccatgagccctaagaagagtggtgaa
gcaagtccagcttctaggcaaactgatgctacaggacctgttccaacaagtaaatcatct
tcagtaggaagcttttatcatcttccatcatacctgaagttatatgatgtcttgaaagca
acccatgctaattacaaggttactttggatctccagaacacaaatgagaagtttggatgt
ttcttacgctctgccttagatgtcctctctcaaatcttggaacttgctactcttcaggac
attggaaagtgtgtagaagaaattttgggatatctaaaatcatgtttcaacagagagcca
acgatggcaacagtgtgtgtacagcagttattgaaaacattgtttgggacaaatctggct
tctcagtatgatggctcctcttcaaaccccagcaaagctcaaggcaaagctcagcgcttg
ggttcctccaacctgaggcctggcctctaccactattgcttcatggcaccctacacacac
ttcacacaggcccttgctgatgccagtctgaggaacatggtgcaggctgagcaggagcac
gatgcttcaggatggtttgatgtgctgcagaaagtttctacacagctgaaaactagcatt
tccagtgcagcaaagcatcgtgctgataagaatgctattcacaatcacattcgtttattt
gaaccccttgtcataaaagcattgaaacaatacacaacaacaacgtcggtacagctgcag
agacaagttctagacttgcttgctcaactggttcagctgagagttaactactgtcttctg
gattcagatcaggtgtttattggatttgtgcttaagcagtttgaatacattgaagtagga
cagttcagggagtctgaagcaattattcctaatatcttctttttcctggtgttgctgtct
tatgagcgatatcattccaaacaaataattggaattcccaagatcattcagctgtgtgat
ggtatcatggccagtgggaggaaagctgttacacatgcaataccagctctgcaacccatt
gttcatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaagagctggaa
actcagaaggaggttgtagtgtcaatgctgctgagacttatccagtaccatcaggtgcta
gaaatgttcatcttggtattgcaacagtgtcataaagaaaatgaagacaaatggaagaga
ttgtctcggcaaatagctgacatcattctcccaatgcttgcaaaacaacagatgcatata
gactctcatgatgccttgggagtattgaacactttgtttgaaattttggccccttcatcc
cttcgccctgtggacatgcttttaaggagcatgtttgttactcctaaaacaatggcatca
gtgagcactgtccagctttggatttctggaattttagctatccttagagttctgatttca
cagtcaacagaagacatcgttctatcccgtatacaagagctttccttctcaccatatttg
atttcatgtcaagcaatcaacaggctgagatgtggagaaaataacatgtccacaccagag
gatcacactgaggtcaaacaggtgaaatacccacctgaagagacattttccagattctta
ctacaactggttggcattctactggaagatattgttaccaagcaattaaaagtagacatg
aatgaacagcaacatactttctactgccaggagctgggcacactgcttatgtgcttaata
cacatcttcaaatcagggatgtttcgaagaatcacagctgcagccaccagactttttaca
ggagatggatctgatggtagtttctacacacttgaaagtctgagtgaccttgttcagtcc
atgattcccactcatccttctttagttctcctctggtgtcacattttgcttcttgtcaat
tataccaactacaactggtggtcagaagtgcatcaaaccccaaagagacacagcctttct
actacgaaattgctgagccctcacatatctggagacagtgatgaatctgacctggaatcc
aagcgtggcatgtgcaatcgtgagatagtgagaagaggagcactcattctcttctgtgac
tatgtttgtcaaaacctacatgattcagaacacctgacctggcttattgtgaatcatgtt
caagacttgattaatctgtcccatgagcctccagtacaagattttatcagtgctgttcac
aggaattcagcagccagtggtctcttcatccaggccattcagtcacgctgtgagaatctt
gcagctcccacaaccctgaagaagaccttgcagtgtttggagggaatccacctgagccag
tctggggcggtgctgacgctgtacgtggacaagctgctgtgcacgcccttccgcgtgctg
gcgcgcatggtggacaccctggcctgccgccgcgtggagatgctgctggcagcaactctg
cagaatagcattgctcagttaccagttgaagaactggatagaattcaggagtaccttcaa
aacagtggattagcagcaagacaccaaagactctactcactcctggataggtttcgtctc
atggtagctccagacacaaccagtccctcacctctggtcacctcacacccactggatggg
gaagatcagccacctttagagaatgtagttctagacaaagactggtacgtgtccctagtg
cggtcacagtgttacatcaggtctgactcagcgcttctggaaggagcagagctggtaaat
aggattcctcagcctgacctgaactcattcatgaccagcaaggaattcaacctaagcttg
ttagcaccttgtttaagccttggcatgaatgagatctcaagggagcagaagagcagcctc
tttgaaacagcttggagagtaactctggaccatgtgtcttctgctgtacaaaaccttcca
gccaaccaccaggtttttcagccactattgccaactgagccatcagcctactggaaaaaa
ctaagcgacatctttggagatgaggtgatgtatcagtctatgatgacactttgtcgtgca
ctggctcagtatttgttgttactctcaaaactaccagctggtctccgtgttcctcctgac
aaagagggtgacatcctgaaattcgtagtgatgtcagtagaggcactatcatggcattta
gtgcatgaccagattccattaagtgtagatcttcaagctggtctggattgttgctgtctg
acactacagcagcctagtctctggaatctgctgtcttctgcagctcatgtgacatatgct
tgctccttaattaactgcattagattcatcatagaagcagttgctgtggaacctggtaat
caacttctgagtcctgaaagaaagaatacttcaaaacctttaagtgagggggaaagtgat
tcaaatgtacagaaaacaaaacacattattgcagcatgtgaaatgatagctgagatggtg
gaatgcttacagactgtcttgtcactggggcacaaaagaaacagcagcatccctgcattt
ctcactcctgtcctcaagaacatcatcatcagtttagcaaggctgcctctagtgaacagt
tacaccagagtacctcccttggtctggaaattaggctggtcaccaaagccttcaggtgac
tttggcacagtttttcctgaaatcccagtagaatttcttcaagaaaaggaaatctttaag
gagttcatctatcgcattaatacacttgggtggatcagccgtactcagttcgaagagact
tgggctactttgcttggtgtgctcgtaactcagcccattgtaatggaccaggaggagaac
cagcaagaggaagatacagagaggacccagatcaatgttctggcagtgcaagccataacc
tccctggtgctgagtgcaatgaccatccctgttgcaggcaatccagcagtcagctgcttg
gagcagcagcctcgcaacaaagctttgaaagctctggacacaaggtttgggaggaagcta
agtgttatcaggggaattgttgaacaggaaatccaggcaatggtgtctaagagagataat
attgctactcatcacttataccaagcttgggaccctgttccatcactttctcctgctact
acaggtgctcttatcagccatgaaaaactcttactgcagatcaatactgaacgagaaata
ggagatatggattataaattgggacaggtctctatccactccatatggttaggaaataat
atcactccactgagagaagaagagtggggtgaggatgaagaagatgagaacgatgtacct
gctccttcctcaccacctacctctcctatcaacaccaggaaacaccgggctggtgtagat
atccactcttgttctcagttcttgcttgagctgtacagtcagtggatattgccatccaac
cccagcaagagaacaccagtgattctgatcagtgaagtggtgcgatcacttctggcagtg
tcagacttatttacagaaaggaatcagtttgagatgatgtacacaacactgacagagttg
agaaaggtgcatccatcagaagatgagattcttgtacagtatttgataccagctacttgt
aaagctgctgctgttcttggaatggataaggctgtggctgaaccagtaagtcgactgctg
gaatcaaccctgaggagcacccacatgccaagtcggattggagccctgcatggaatcctt
tatatccttgagtgtgacttgctggatgaaacagcaaagcagctcattccaattatcagc
gagtatctgctctccaatttgagaggagtagcacattgtgtgaatatccataaccaagag
cacattttggtcatgtgtgcagctgctttctatttgattgagaattacccacttgatgta
gggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaaatgat
gaatcaacaccatccattatttatcactgtgtcctgagaggattggagcgactcctcctt
tcagagcagctttccaggctggacagtgagtccctggttaagctgagtgttgacagggtg
aatgtgcagagcccccacagagcaatggcagccctgggattgatgctgacttgcatgtac
acaggaaaggaaaaaatcagccccagccgtatcccagatgcaaatcctggtgctcctgac
agtgaatctgtgattgttgctatggaacgagtatctgtcctttttgataggatcaggaag
ggatttccctttgaagctcgagtagtggctcggattcttccgcagttccttgatgatttt
ttccccccacaagatgtaatgaacaaagtcattggggaatttctgtccaatcagcagcca
tacccacaattcatggcaacagtagtttataaggtgttccagacactgcatagcactgga
caatcctccatggtccgtgactgggtgatgctctctctctccaatttcacacaaagaaca
cctgtggcaatggcaatgtggagtctttcctgtttttttgtcagtgcttccaccagtcaa
tggatttcagcaattcttccacatattatcagcagaatggggaaatcagagcaggtggat
gttaacatcttctgtttggtggccatagacttctaccggcaccagatcgatgaggagttg
gatcggagagccttccagtcggtgtttgaggtggtggcatctccaggaaccccataccac
cgcctcctgacctgtttgcaaaatgtccacaaggtcacagcatgctga
DBGET
integrated database retrieval system
