Molothrus aeneus (bronzed cowbird): 136556332
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Entry
136556332 CDS
T11621
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136556332 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maen03021
]
136556332 (SMARCA5)
03036 Chromosome and associated proteins [BR:
maen03036
]
136556332 (SMARCA5)
Transcription machinery [BR:
maen03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
136556332 (SMARCA5)
Chromosome and associated proteins [BR:
maen03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
136556332 (SMARCA5)
RSF complex
136556332 (SMARCA5)
WICH complex
136556332 (SMARCA5)
B-WICH complex
136556332 (SMARCA5)
NORC complex
136556332 (SMARCA5)
BRF complex
136556332 (SMARCA5)
NuRF complex (fruit fly)
136556332 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
SLIDE
Myb_DNA-binding
AAA_14
Phi812_tail_tube
Motif
Other DBs
NCBI-GeneID:
136556332
NCBI-ProteinID:
XP_066405581
LinkDB
All DBs
Position
4:5544028..5566823
Genome browser
AA seq
969 aa
AA seq
DB search
MSAGQPPPQPDEPPAPPLPPGANTSEAGGTGPPCAGGLAGGDIKMEESFDDASLAKQKEI
QETDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ
NLLSAGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQIRGLNWLIS
LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLQNWMNEFKRWVP
TLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI
KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNN
CLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP
KLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDSSKF
VFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGKLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITDED
IDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKLAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKMDGTPDG
RGRKKKLKL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagccgccgccgcagccggacgagccgcctgcgccgccgctgccaccg
ggcgccaacaccagcgaggccggggggacggggccgccctgcgccggcggcctggccggg
ggcgacatcaagatggaggagtcttttgatgatgcgtctttggcaaagcaaaaagaaatc
caggaaacagatcctacatatgaagagaaaatgcaaacagacagagcaaacagatttgaa
tatctcttgaagcagactgagctctttgctcatttcattcagcctgctgctcagaaaact
ccaacttcacctttaaaaatgaaacctggacgtccacgaataaagaaggatgagaaacag
aatttactgtcagctggcgactatcggcaccgtagaacagagcaggaagaggatgaggag
ctgttaacagaaagctccaagacaacaaatgtctgcactcgatttgaagaatctccatca
tatgtgaaatggggaaagctgcgtgattaccagatccgaggactgaactggctcatttct
ctgtatgaaaatggcatcaatggcatcctggcagatgaaatgggtcttgggaagacactg
caaacaatttctcttcttggctatatgaaacactacagaaacattcctggacctcacatg
gtgttagttcctaagtccactctgcagaactggatgaatgaattcaagagatgggtacca
acacttcgagcagtttgtttgattggtgacaaagaccagcgagctgcctttgtgagagat
gtgttgctgcctggagaatgggatgtctgtgtaacatcatatgaaatgcttatcaaagag
aagtcagtattcaaaaagttcaactggagataccttgttatagatgaggcccacaggatt
aaaaatgaaaaatcaaagttatcagaaattgtaagggaattcaagactaccaaccgactg
ctattaactggaactccacttcagaacaatttacatgaactctgggcacttctcaacttc
cttttgccagatgtctttaactcagctgaagattttgattcgtggtttgataccaacaac
tgtctaggggatcaaaaactggtggagcgccttcatatggtgctacgaccattccttctc
cgtcgcatcaaggctgatgtggagaaaagcttgcctccaaagaaggaagttaaaatttat
gtgggcctcagcaaaatgcagcgagaatggtatacccgaatcctgatgaaggatatagat
atcctgaactcagctgggaagctggacaagatgagactgctgaacatcctgatgcagctg
cggaaatgctgcaatcacccgtacctctttgatggagcagagcctggcccaccttacaca
acagacatgcatttggtcactaacagtggcaagatggtagttctagacaaattgctacct
aagttgaaagaacaaggctcaagggttctaatcttcagtcagatgacaagagttctagat
attttggaagattactgtatgtggagaaattacgaatattgcagactggatggacaaact
cctcacaatgagcgacaggcttccattaatgcattcaacgatcctgacagctcaaaattt
gtgttcatgttgagtacacgagcaggaggtcttggaatcaatctggctactgctgatgtt
gtaattctctatgattcagactggaatccacaagtagatctccaggctatggatcgagcg
cacagaattgggcagaccaagactgtccgtgtgttcaggtttattacagacaataccgtg
gaggaaaggatagtggagcgtgcagaaatgaaactgcgcctggattccatagtcatccag
caaggcaaattggtggatcaaaacctgaataaacttggaaaggatgaaatgctgcaaatg
atcagacatggagcaacacacgtgtttgcttcaaaggatagtgagattacagatgaagat
attgatcacattttggaaagaggggcaaagaagactgcggaaatgaacgaaaaactttca
aagatgggtgaaagctcccttaggaattttactatggatactgaatctagcgtgtataat
tttgaaggggaagactacagagaaaaacagaagttggcatttacagagtggattgaacca
cctaaaagagaaagaaaagccaattatgctgtggatgcttacttcagagaggctcttcga
gtcagtgaaccaaaagcacccaaggctccacggcctccaaaacagccaaatgtacaggac
ttccagttctttcctcctcgcctgtttgaactgttggaaaaagagattctctactacagg
aaaacaattggttacaaggtacctcgtaatcctgatctcccaaatgcagcccaagcacaa
aaggaagagcagcttaagattgatgaggctgaacctcttaatgatgaagaactggaagaa
aaagagaaacttctaacccagggcttcactaactggaataagagagatttcaaccagttc
atcaaagccaatgagaaatggggccgtgatgacattgaaaatatagcacgagaagtcgaa
ggaaaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaatgaa
ctccaagacatagagaagatcatggctcagattgaaagaggagaagctagaattcagaga
cgaatcagcataaaaaaggctctcgatacaaaggagctacaaaggaggtgtaatacttta
atcacactcattgaaagagaaaacatggaactggaagaaaaggaaaaggcagaaaagaag
aaacgtggaccaaaaccatcttcagcacagaagcgcaaaatggatggcactcctgatggg
cgtgggagaaaaaagaagctaaagttgtga
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integrated database retrieval system
