Molothrus aeneus (bronzed cowbird): 136558285
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Entry
136558285 CDS
T11621
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
136558285 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maen04121
]
136558285 (RAG1)
Enzymes [BR:
maen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136558285 (RAG1)
Ubiquitin system [BR:
maen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136558285 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
136558285
NCBI-ProteinID:
XP_066408721
LinkDB
All DBs
Position
6:19781023..19784145
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AA seq
1040 aa
AA seq
DB search
MSVASQMDLPEELQHTYTKFSEWKFKLFKLRSFQKTASDDSQHIHKDQAEEAVSSNKEII
LHEDEAVPRGEKMELTGNRQGLEEDAHAMKTQDNRVHHNNLKQLCRICGVSFKTDCSKRT
YPVHGPVDDETLWLLRKKEKTATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWSIIHRK
FSNTLCEVYFPRNSTMEWQPHSPNCDVCHTTRRGVKRKSQPPSVQHGKRVKKTGERAQLN
RGVKNQHLKQAQINNKNLMKEIVNCKDLHLSIKLLVVDYPVDFIKSISCQICDHILADPV
ETTCKHLFCRTCILKCIRVMGSYCPSCWYPCFPTDLVTPVKSFLNILDNLSIRCPVKECD
EEISHGKYGQHLSGHKEMKEGELYSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFA
EKEEGGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRINTFLSCS
QYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLS
GLPLSIDDYPVDTIAKRFRYDAALVCALKDMEEEIFEGMKAKNLDDYLNGPFTVVVKESC
DGMGDVSEKHGSGPAVPEKAVRFSFTVMNISIAHGNESKRIFEEVKPNSELCCKPLCLML
ADESDHETLTAILSPLIAEREAMKNSELLLEMGGILRTFKFIFRGTGYDEKLLREVEGLE
ASGSTYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGV
SAKPFIETVPSIDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRK
KMNLKPMLKMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPA
KECPELLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASE
GNESGNKLFRRFRKMNARQSKVYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQNFTIDSG
GSLGDSLPLEVLENNDSAEL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcatcacaaatggacctacctgaagaacttcagcatacatatacaaaattt
tctgaatggaaattcaagctctttaaattgcgatcattccaaaaaacagcctctgatgac
agccagcacatacacaaagatcaggcagaagaggctgtttcttcaaacaaagaaatcatc
ctgcatgaagatgaagcagtgccaagaggagaaaagatggagttaacgggcaataggcag
ggacttgaggaagatgcccatgccatgaaaacacaagacaacagagttcatcacaacaat
ctgaagcaactctgccgcatctgtggggtttcatttaaaactgattgttccaagagaact
tacccagtgcatgggccagtggatgatgaaactctttggcttctgagaaagaaagaaaaa
acagcaacctcttggccagatcttattgctaaggttttcaagattgatgtgcgaggggat
gtcgacactatccatcccactcgattttgtcacaactgttggagtattatacatagaaaa
ttcagtaatactctatgtgaagtgtattttcctaggaacagcacaatggagtggcaaccc
cattccccaaactgtgatgtctgccacactaccagacgaggagtcaagagaaaaagccag
cctccaagtgtgcaacatggcaaacgtgtaaaaaagactggggaacgtgctcagctaaac
agaggtgtaaagaaccaacatctcaaacaagcacagataaacaacaaaaatttaatgaaa
gagattgtcaattgcaaggatttacatctcagcatcaagctgcttgtagttgattaccca
gtagatttcattaaatccatttcttgccagatttgtgatcatattttggcagatccagtg
gaaacaacgtgcaagcacttgttttgcagaacttgcatccttaaatgtatcagggttatg
ggcagctattgcccctcctgctggtatccttgctttccaactgatctggtaaccccagtg
aaatccttcctgaacatccttgataatctgagtataagatgccctgtaaaggaatgtgat
gaagagatctcacatggaaaatatggccaacacctttctggccacaaggagatgaaagaa
ggagagctctacagctatatcaataaaggtggtcgaccgaggcagcacctcctgtctttg
acgaggagagctcagaaacatcgtctgagggagctgaaacgtcaagtcaaggcttttgct
gagaaagaagagggcggtgatataaaggcggtgtgcatgactttgttcctgctagctctg
agagcaaaaaatgaacacaaacaagcagatgaactggaggctataatgcaaggcagagga
tctggacttcatcctgctgtctgtctggccatccgaatcaacacgtttctcagctgtagt
cagtatcataaaatgtatagaacagtaaaagctgtcactgggaggcagatcttccagcct
ttgcatgctcttcgcactgctgagaaagccctcctaccaggttatcacccctttgagtgg
aaacctcccctgaaaaatgtatccactaacacagaagtgggaattatagatggattatca
ggactgccactctcaattgatgattacccagtagacacaattgcaaagagattccgatac
gatgccgccttggtttgtgccttaaaggacatggaggaggagatcttcgaaggcatgaaa
gcaaaaaacctggatgactatttgaatggccccttcactgtggtagtaaaagagtcctgt
gatggaatgggagatgtcagtgagaagcacggaagtgggcctgctgtcccagagaaggct
gttcgcttttccttcacagtcatgaacatttctatagcacatgggaatgaaagcaagagg
atctttgaggaagtaaagcccaattcagagttgtgctgtaagcccttgtgccttatgctg
gctgatgaatcagatcatgaaactctgacagcaatcctgagccccctcatagcagaaaga
gaggctatgaaaaacagtgaactgctgcttgaaatgggaggcatcctgagaacatttaaa
ttcatctttaggggtacaggatatgatgagaaactcttgagggaagtggaagggctggag
gcctcaggttccacttatatttgtaccctgtgtgatgcaacccgcctggaggcatcccag
aatctggtcttccactccataaccaggagccatgctgaaaatctggagcgatatgaaata
tggaggtccaacccatatcacgagtctgttgatgagctccgtgacagagtgaagggtgtt
tcagccaaaccttttattgagactgttccctccatagatgcactgcactgcgacattggc
aatgcaacagaattctacaggatcttccagatggagattggtgaactttacaagaatcct
gatgtgtctaaagaggagaggaagaggtggcagttaactcttgacaaacacctcaggaag
aagatgaacttgaagcctatgctgaagatgagtggaaattttgctagaaagctgatgtcc
aaagagactgtagaggcagtatgtgaattaattaagtgtgaggaaaggcatgaagcccta
aaagaactaatggacctttatctgaagatgaagccagtgtggcgatcctcatgccctgcc
aaggagtgcccagaactgctgtgccagtatagcttcaattcacagcgttttgcagagctc
ttatctacaaagttcaagtacagatatgagggcaagattacaaattatttccacaaaacg
cttgctcatgttcctgaaatcattgaaagagatgggtccattggggcctgggcaagcgaa
ggaaatgagtctggaaacaagctgtttaggaggttccgaaaaatgaatgccaggcagtcc
aaggtctatgagatggaggatgtcttgaagcaccactggctatatacctccaagtacctc
cagaagttcatgaatgctcataaaacattaaaaagccagaacttcaccattgattcaggg
ggtagtttaggtgactccttgccactggaggtcttagaaaacaatgattcagcagaactc
taa
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