Molothrus aeneus (bronzed cowbird): 136558664
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Entry
136558664 CDS
T11621
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136558664 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maen03041
]
136558664 (PRPF40A)
Spliceosome [BR:
maen03041
]
Complex A
U1 snRNP components
U1 related factors
136558664 (PRPF40A)
Complex B
136558664 (PRPF40A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
136558664
NCBI-ProteinID:
XP_066409374
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All DBs
Position
7:complement(37748313..37766940)
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AA seq
901 aa
AA seq
DB search
MRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQQSSTTTS
SASEEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEDAAAAASAPATAGDAPSGASA
APAAESATAAAAPAGAAPEGESAPAATTGDTDTAGTATAEEQGQGGAAPGTQDGSADTAA
AATDEAARQEASGDAAAKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQ
AMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKM
TSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNI
LDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQ
KSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTA
LDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNI
KLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKE
PAFEDITLESERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDD
DSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKK
DRERDSEKERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDED
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcggcgtcgaccgcggctctctcatgatgggccacccgggcatgccccac
tacccccccatggggatgcaccccatgggccagagaccccccaacatgcccccagttccc
cacgggatgatgcctcagatgatgccccccatgggaggacccccgatggggcagatgcct
ggaatgatgcagtcggtgatgcctggaatgatgatgtcccacatgtcccaggctgccatg
cagcccacggttcctccaggagtgaacagcatggatgcacaagtaggtgtgacccctcct
gggactcagacaacgcatcccgtggtgtccacagtccagcagagctccaccaccaccagc
tctgccagcgaggagcactccaagcagaaatccacgtggacggagcacaagtccccggat
ggaagaacttattactacaacactgagaccaagcagtccacgtgggagaagccagatgac
ctcaaaacccctgctgagcaattgctgtccaagtgtccctggaaggagtataaatcagac
tctgggaagccttattattacaattcccaaacaaaggaatcccgctgggcaaaacccaaa
gagctggaggatcttgaagcaatgattaaagctgaagaaaacagcacgaagccagaggat
gcggctgccgccgcctcggctccggccacggccggggatgccccgagcggggccagcgcg
gccccggccgccgagagcgccacggccgcggctgctcctgcaggagctgctcctgagggg
gaatcggccccggccgccaccacgggggacacggacacggctggcactgccacggccgag
gagcagggccagggcggcgccgcccccggcacgcaggacgggagcgcggacaccgcagcg
gccgccacggatgaggcagccaggcaggaggcctcgggagatgctgctgcaaagaaggag
gatgaggatgcccagccagttaaaaaaacctacacgtggaacacaaaggaagaggccaaa
caagcatttaaagaactgttaaaagaaaagcgggttccctccaatgcttcctgggagcag
gccatgaaaatgatcattaatgaccccagatacagtgctctggcaaaattgagtgaaaag
aagcaggcctttaatgcctacaaagttcagacagagaaggaggagaaggaagaagccaga
tccaagtacaaggaagccaaggaatccttccagcgtttcctggaaaaccatgagaagatg
acatccaccaccagatacaaaaaagctgaacagatgtttggggagatggaagtgtggaat
gccatatccgagcgggaccggctggagatctatgaggatgttctgttcttcctgtccaag
aaggagaaggaacaagccaagcagctgcggaagaggaactgggaagctctgaagaacatc
ctggataacatggccaacgtcacctactgcaccacctggtcagaggcccagcagtacctc
atggacaaccccacctttgctgaggatgaggagctccagaacatggataaggaggatgcc
ctgatctgttttgaggaacacatcagggccttggagaaagaggaggaggaagagaagcag
aaaagtttgctgagggaaaggaggaggcagcgtaaaaacagggagtctttccagctgttt
ctggatgagctgcacgagcacgggcagttgcactccatgtcctcctggatggaattgtac
ccagccatcagctccgacatcagattcaccagcatgctcggccagcctggatcaacagca
ctcgacctgttcaagttttacgtggaggatttgaaagctcgttaccacgatgagaagaag
ataattaaagacatcctaaaggataaaggatttgtggtggaggtgaacacttcctttgag
gattttgtcactgtcatcagctccactaaaagagccaccaccttggatgcagggaacatc
aagctggctttcaacagtctgctggagaaggcggaggcgcgggaacgggagcgggagaag
gaggaggcccggaagatgaagaggaaggaatcggccttcaagagcatgctgaaacaagcc
acccctcccatcgagctggatgctgtctgggaggatatcagagacagatttgtgaaggaa
ccagcatttgaagacatcaccctggaatctgaaaggaaaaggatatttaaggatttcctt
catgtacttgagcacgagtgtcagcaccaccactccaagaccaagaaacattcgaagaaa
tccaaaaaacaccaccggaagcgctcgcgttcccgctccggctcagagtccgaggatgac
gacagccactccaagaagaagcggcagcgctcggaatcgcggtcggtgtccgagcgttct
tccagcgccgagtccgagaggagctacaagaagtccaaaaaacacaagaagaagagcaag
aagaggaggcacaagtctgattcaccagaatctgatgtggaacgagagaaggacaagaag
gatagagagagggacagtgagaaggaaagagccagacagagatctgagtccaagcataaa
tctcccactaagaaacggcctgggaaagattccggaaactgggatacctctggcagcgag
ctcagcgagggggagctggaaaagcagaggaggactcttttggaacagctggatgaagat
caatga
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