Molothrus aeneus (bronzed cowbird): 136558884
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Entry
136558884 CDS
T11621
Symbol
COL18A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
maen Molothrus aeneus (bronzed cowbird)
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maen04147
]
136558884 (COL18A1)
00535 Proteoglycans [BR:
maen00535
]
136558884 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
maen00536
]
136558884 (COL18A1)
Exosome [BR:
maen04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136558884 (COL18A1)
Proteoglycans [BR:
maen00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
136558884 (COL18A1)
Glycosaminoglycan binding proteins [BR:
maen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136558884 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
136558884
NCBI-ProteinID:
XP_066409747
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All DBs
Position
7:39480..58792
Genome browser
AA seq
1952 aa
AA seq
DB search
MXVLRESGLDRTPASSLLSFLQPLHSALGSNGACFPFPMAPPRLGFLLLLACCFSCSETQ
LLDWVWDSTKTTGSPELPSEKIPESELPTSAVAPAPSPSPGMWGGKVAGNVTTPWQQEPD
PATAVPVSEGAAAKTTEPTTWPSIAPLHSMSPAPGQQVASSPTDDPQLLGTGTHKDPQLL
GSGITEDLQLLWSGTTEDLQFLETGTTENLLLLRMRTTEDPQFLGSVTPKDPQLLGTGTT
EDLKLLGSGTTENPQLLRMGTTKDPQLLGSGTTEDRQLLGLGTTEDPQLLGMMSTTDLQL
LVAGHTKDPQPLGTGTTEDPQPLGTGTTEDPQPLGTGISEDPEFPGMRTTENLQLLVVRN
TELLRTVTTKNPEFQGNTENPQLLRTVTPEDPEFLGMGTPTMESQVSLQRPAGLQPGSAP
FPFSAGDSTREQAVSFQDPLAQPPHYFPAASRNPGLALASRSRSQSPPWPDQRVDKGVDS
PTADNSVPLEFDLLSATMQLYRSDGVGLTSFFPGLMPVASRCQPIPTHLPFCSVLGTTHV
RLPNYLQHGSEEEIRAALHEWEGLLESRCHRYLEWFLCLLLLPGCSPSVPITPPPCQGFC
EAVRDLCWTPLAGRHLPLPCDALPEEDEGVSCVFINASAESLSAEISLLELIGDPPTEEI
HRIYGPDNNPGYVFGPNANTGQVARYHLPSPFYRDFSLLFHIQPTTPRAGVLFAVTDSSQ
SIIYVGVKLSELRAGQQQIIFYYTEPGSPSSYPAATFTVPTLLNQWTRFAISVEEEEVVL
YLDCEEHERVRFERSPDEMELEEGSGLFVAQAGGADPDKYQGVIADLKLRGDPRAAERQC
EEEEDDTEVSGDFGSGMEGGQQPSGKVEGVPGLLDAVPVTSPPVAGGSGPRSGGGSPQQA
ERTRAEETLRVSTGGTGQKGEKGEKGERGLKGDSGTNGIVGPGSVKGQKGEKGDLGVKGS
AGFGYPGSKGQKGEPGDPGLPGTLSQHANGSVVEQVTGPPGTPGKDGAPGRDGEPGDPGE
DGKPGEMGPPGFPGMPGEPGLKGEKGDPGVGPRGPPGPPGPPGPPGPSSKNDKLTFIDME
GSGFGGDLESLRGPRGPPGPPGPPGVPGLPGEPGRFGMNRTDLLGPPGLPGRDGTPGPPG
PVGPRGPPGRDGEDGQPGPKGEQGDMGDLGLPGLPGPKGNKGETGPAGPPGEMGLAGLPG
PIGPRGRPGPPGPPGPPGPGYEAGFGDMEGSGLSFTPGPPGPEGPQGVPGLPGLKGEVGS
PGQPGLPGPKGDAGMPGMDGRPGLEGFPGPQGPKGDKGSTGEKGERGQDGVGLPGPPGPP
GPPGQVISVSGEDKSLVAFPGPEGRPGHAGFPGPVGPKGDQGSTGPQGAPGLKGEKGEPG
VIISPDGTVVTAKMKGEKGEPGLQGPMGPSGPPGRAGMKGEIGFPGRPGRPGMNGLKGEK
GDPADVLSLRGPPGPPGPPGPPGPPGSIVYNNGNTFSDSSHPAFPSFHQFSGQKGEKGDT
GPPGPPGQFPYDVSHFGTSLRGDKGDAGPKGEKGEPGSTPLYSPGVSGLPGPPGPQGYPG
LPGPKGDSIVGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQAVSIPGPPGP
PGPPGPPGTSGISLGLQAMPTYQAMLSAAHELPEGGLVFLTDRQELYVRLRGGFRRVLLE
EHNLIPSSALDNEVYDKPPTLHYAGPQPRGPLHPLRNHVPSATAHPWRGDEVVANQHRLP
EQPLLHHQHELINGYYIHRRPDPAPVAAHVHQDFQPALHLVALNTPLSGGMRGIRGADFQ
CFQQARQVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLRDEVLFNNWEALFTGSGA
PLRTSARILSFDGRDVLRDAGWPQKSVWHGSDAKGRRLPESYCETWRTEERAVTGQASSL
ASGKLLEQVASSCQQAFIVLCIENSFMTATKK
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgtgagtgctccgagagtctggcttggacagaactcctgcctcttccctcctttccttc
ctccagcctctccactccgctctcgggagcaacggagcttgttttccctttccgatggcc
ccacctcgcttggggtttctgctcctcttagcttgctgcttctcctgctctgaaacacag
cttctggactgggtttgggacagcacgaagaccacaggaagcccagaactacccagtgag
aaaatcccagagtcggagctgccaacctcagcggtggctccggctcccagcccgtcccca
gggatgtggggtggcaaagtggcaggaaatgtcaccaccccatggcagcaggagccagat
cctgctacagcagtacctgtgagtgagggagccgcagccaaaaccacggagcccacgacg
tggccgagcatcgctcctctccacagcatgtcacctgccccaggacagcaggtggccagc
agccccactgacgacccccagctcctggggacagggacccacaaggacccccagctcctg
gggtcaggcatcactgaggacctgcagctcttgtggtcaggaaccaccgaggacctgcag
ttcctggagacaggaaccactgagaacttgctactcctgagaatgaggaccactgaagac
ccccagttcctggggtcagtgacccccaaggatccacagctcttggggacagggactact
gaggacctgaagctgctggggtcagggaccactgagaacccacagctcctgaggatggga
accaccaaggacccccagctcctgggatcagggactactgaggaccggcagctgctgggg
ttgggcaccactgaggacccacagctcctggggatgatgagcaccacagacctgcagctc
ctggtggcagggcacaccaaggacccacagcctttggggacagggaccactgaggaccca
cagcccttggggacagggactactgaggacccacagcccttggggacagggatttctgaa
gacccagagttcccaggcatgaggaccactgagaatctgcagctcctggtggtgaggaac
actgagctcctgaggacagtgaccaccaagaacccagagttccaagggaacactgagaac
ccacagctcctgaggacagtgacccctgaagacccagagttcctggggatgggaactcct
acaatggagtcacaggtgtccttgcagagaccagcaggtctccagccaggtagtgcccct
tttcctttctcagcaggtgacagtacccgtgagcaggcggtgtctttccaggaccccttg
gcacaacctccccattacttccccgcagcatcacgcaacccagggctggctctggccagc
aggagcaggagccagagccccccttggcctgaccagagggtggataagggtgtggattct
cctactgccgataactctgtccctctggagtttgatttactaagcgctaccatgcagctc
tacaggagtgacggcgtggggctcacatccttctttccaggactgatgccagtggccagc
cgttgccagcccatcccgacccacctgcccttctgcagcgtgctgggcaccacccatgtc
cgactgccaaattaccttcagcatggcagtgaggaggaaattcgggcggctttgcatgag
tgggaggggctgcttgagtcgcggtgccatcgctacctggagtggttcctctgcttgctg
ctgctccccggctgtagcccctcggtccccataacccccccgccgtgccagggcttctgc
gaggccgtcagagacctgtgttggactcccttggccggcaggcacctgcctctgccttgc
gatgctctccctgaggaggatgaaggggtttcttgtgtctttattaatgcttctgcagag
agcctgagtgctgagatcagcctgctggagctgattggggacccgccaacggaggagatc
cacagaatttatggccccgacaacaaccctggctacgtctttggtcccaatgccaacacg
ggccaggtggcccggtaccacctgccgagcccgttctaccgagacttctcgctgctgttc
cacatccagcccaccacgccccgggccggtgtgctctttgccgtcacggactcctcgcag
agcatcatctatgtgggcgtcaagctctcagagctgcgcgcgggccagcagcagatcatc
ttctactacacggagccgggctcgcccagctcctacccggccgccaccttcactgtgccc
accctgctcaaccagtggacgcgcttcgccatcagcgtggaggaggaggaagttgtcctc
tacctggactgtgaggagcacgagcgtgtccgctttgagcgctccccagatgagatggag
ttggaagagggctctgggctctttgttgctcaggctggaggggctgacccagataaatac
cagggggtcattgcagatttgaagctccgaggggaccctcgggcggctgagcgccagtgt
gaggaagaggaggatgacacagaggtctctggggattttggcagcgggatggaaggtgga
cagcagccctcaggcaaggtcgagggtgtcccagggctgctggatgctgtccccgtgacc
tccccccccgtggcggggggcagtggcccgaggagtggcggggggtccccgcagcaagcc
gagaggaccagagcagaggagacactgcgggtctccacgggaggcaccggtcagaaaggc
gaaaagggagagaagggggaacgtggcttgaaaggagactcagggaccaatggcattgta
gggccaggcagtgtcaagggtcaaaagggggagaaaggagacctgggtgtcaagggcagt
gctggatttggctaccctggctctaaaggccaaaaaggagaaccaggtgaccctggactc
cccgggaccctctctcagcatgccaatggctcggtggtggagcaggtcactggccctcca
gggacaccagggaaggatggagcccctggcagggatggcgagcctggagatcctggcgag
gacggcaaacccggtgaaatggggcccccaggattccctgggatgccaggggagccaggc
ctgaagggggagaagggtgacccaggtgtggggccaaggggaccccctggaccacctggc
cctccgggaccaccgggaccctcctccaagaatgacaagctgaccttcatcgacatggag
ggctctggcttcggtggtgacctggagagcctgcggggtccacgagggccacctggtccc
ccagggccacctggcgtgcctggtttgccaggggagccaggaaggtttgggatgaaccgc
acagacctgctgggaccgcctgggctgccaggcagggacgggacccctgggcccccgggg
ccagtgggtcctcggggtcctccaggaagagatggggaggatgggcagccggggcccaaa
ggagagcagggcgatatgggtgaccttggcctccctggcctaccaggacccaagggcaac
aaaggagaaacgggaccagcagggcccccaggagaaatgggcttagccggccttcccggg
cccatcggaccccgagggcggccagggccccccggccctccaggaccaccggggccaggc
tacgaggctggctttggtgacatggagggctcggggctgtcattcacccctggaccacct
gggcctgaaggaccacagggcgtgccaggactaccggggctgaagggagaggtcggcagc
cccggacagcctggcttgccgggaccaaagggagatgctggcatgcctggcatggatggc
cgccctggcctggagggcttccctggaccacagggacccaaaggtgacaaaggcagtacc
ggtgagaagggagagcgaggccaggatggagtggggctgcctggcccccctggcccacct
ggtccccctggacaggtcatcagtgtctctggtgaagataagtccttggtggcttttcct
ggtccagagggcagaccaggccacgctggcttcccgggcccggtgggaccgaaaggagac
caggggtcaactggtccccagggtgccccagggttgaagggggagaagggggagcccggc
gtcatcatcagccctgatgggactgtggtcactgccaagatgaaaggagaaaagggggag
ccagggctgcagggcccaatgggaccatcgggtcccccaggacgagcagggatgaaggga
gagattggctttccgggcagacccggacgtcctggcatgaacgggctgaagggcgagaag
ggtgaccctgcagacgtgctgagcttgcggggtcccccaggccccccaggaccccctggg
ccccctgggccacctggcagcatagtctacaacaatggcaatactttcagtgactccagc
cacccagcgttccctagtttccaccagttctcaggacaaaagggagagaaaggtgatacc
ggacccccaggaccaccaggccagttcccctatgacgtgagtcactttggtaccagcctg
cggggtgacaagggggatgcaggtcccaagggtgagaagggcgagccaggcagcacccca
ctctacagtcctggagtctctggacttccagggcctccagggccccagggataccccggg
ctgccaggtcccaagggggacagtattgttgggccaccagggcctccaggacctcagggt
ccccctggtatcggatacgaggggcggcagggcccccctggccctcctggtccacccggg
ccaccctccttcccaggtccccacagacaagctgtcagcatccctggacccccgggacca
ccaggaccccctggaccaccaggcactagtgggatatccttggggctccaggccatgccc
acgtaccaggcgatgctgagtgccgcgcacgagctgcccgagggcggcctcgtcttcctg
acggaccggcaggaactctacgtccgcctccgcgggggcttccgcagggtgctgctggag
gagcacaacctgatccccagttcggctctggacaacgaggtgtacgacaagccgcccacc
ctccactacgctggcccccagccccgcgggcccctgcacccgctccgcaaccacgtcccc
tcggccaccgcccatccctggcgtggggacgaggtggtggccaaccagcaccgcctgccc
gagcagcccctgctccaccaccagcacgagctcatcaatgggtactacatccaccgccgg
ccagaccccgcccctgtggccgcccatgtgcaccaggacttccagcctgcccttcacctg
gtggctctgaacaccccgctgagtggtggcatgcgtggtatccggggcgccgatttccag
tgcttccagcaagcccgacaggttgggctggctggcaccttccgtgccttcctgtcctcg
cgcctgcaggatctctacagcatcgtgcgcagggccgaccgcgccgccgtccccattgtc
aacctccgggatgaagtgctcttcaataactgggaagcccttttcacgggcagcggggcc
ccactgagaaccagcgcccgcatcctctcctttgatggccgggatgtcctgcgggatgcg
ggatggccacagaagagtgtctggcatggctcagatgccaagggtcggcgcctgcctgag
agctactgcgaaacatggcggacagaggagcgtgcagtcactggccaggcttcctccttg
gcctctggaaaactgctggagcaggtggccagcagctgccagcaagccttcattgtcctc
tgcatcgagaacagcttcatgaccgccaccaaaaagtga
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