Molothrus aeneus (bronzed cowbird): 136560650
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Entry
136560650 CDS
T11621
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen04382
Cornified envelope formation
maen04510
Focal adhesion
maen04512
ECM-receptor interaction
maen04518
Integrin signaling
maen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136560650 (COL4A4)
04518 Integrin signaling
136560650 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136560650 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
136560650 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136560650 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maen04147
]
136560650 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
maen00536
]
136560650 (COL4A4)
Exosome [BR:
maen04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
136560650 (COL4A4)
Glycosaminoglycan binding proteins [BR:
maen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136560650 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
136560650
NCBI-ProteinID:
XP_066412712
LinkDB
All DBs
Position
10:complement(9914436..9976265)
Genome browser
AA seq
1681 aa
AA seq
DB search
MALTKGSFERIKWLITAAWWLLIVFSTQGIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGENGKPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGREGPRGKHGLDGCNGSRGDPGFPGENGYMGPRGPYGIPGQKGEKGNSVYILHFGKGLP
GERGDPGPPGLPGPRGSRGTTGPSGYPGHPGLPGVPGYPGLPGEQGNPGIGVDGQKGEPG
DIGLPGPPGSPLLVGPPGAQLFKGQKGQKGLPGVTGYRGPRGPKGILGRGEKGEKGLPGF
PGLRGHPGSYGPAGSPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGAVGTPPLPIK
GPRGDPGFPGPVGEMGSVGPIGPSGLLGRPGYDGTSLPGLPGVSGAPGPQGFQGDPGLPG
TGESIPGRPGFPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGPKGQIGLPGRKGAKGE
KGSQGLCSCGAGPPGARGVQGPAGTPGKKGQMGSPGRHGEKGDPGLSGAVGSPGLPGTPG
SAGQHGEKGEKGDPGRVRIKGLKGERGPTGLPGFPGQRGPDGRDGELGLPGEKGAEGDSG
VAIPGDKGSPGLPGPPGVKGQMGLPGLGLPGSPGARGSPGDSGDMGNVGPPGPKGQKGET
VCITSPYPGNPGPPGFKGVQGQKGLKGLPGHPGPNGFDGQKGHQGRPGAGIPGPEGFRGT
AGDPGDEGERGSTIDGKNGLPGPPGTDGQKGLPGDTTYGPPGIPGTRGLPGPPGARGARG
NPGIPGLQGQPGTPGFPGAKGFRGPEGDVGAPGCPGFPGSPCVPGLPGPPGLRGVMGLPG
PQGLPGFKGQRGDRGLAGPPGIKGLKGSLGSRGLPGPPGSRGPPGLPGNRGPVGFPGETG
SKGIQGPQGFPGLPGMQGPVGIFGVKGEEGKMGLPGPSGECGDMGMKGERGPPGDSGCVN
LRLEKGQRGDPGFPGEHGLRGDTGEKGNTGLRGTRGFPGKNGVPGLPGDQGDTGVMGFPG
SRGLPGPKGLQGMTGFQGEPGDQGDVGLPGNPGYPGLTGSKGCKGKRGDPTPLLGTHGQK
GSLGDPGLPGLRGFPGQKGLPGIQGQPGRPGSKGDPGYPGPPGLPGATGPQGLPGEPGEK
GKPGILGPPGLQGLPGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGPPGYSGEIG
PKGDRGEPGWPGISIPGPPGERGFPGFPGRRGPVGPTGPMGRSPDSASPGPPGDQGLPGL
DGIRGDPGNPGPPGETIFVRGDPGDSGVQGAPGNPGPRGQQGARGPPGSQGREGPKGPMG
VHGPQGPPGALGQPGDQGFPGRPGPRGPTGFIGDPGEPGKVDDSCPTIPGPPGEAGQRGE
DGSAGLPGPIGHPGPQGIKGEEGSYGLPGQDGLPGAPGPPGDQGSQGEQGYAGPQGPPGQ
TGVPGQPGPQIRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPVFSTMPFAYCNINQVCYYASRNDKSYWLASAAPLPTAPLSEEEVQPYISRCAVC
EAPAQAVALHSQDQSIPPCPPNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKH
G
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaagggttcatttgaacggattaagtggcttatcacagctgcctggtgg
ctgctgattgttttttcaactcaaggaattgatgggggaggatatgcatatattgatcca
tgtgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaaggggtcag
cctggtgagctgggagctcaaggtccgattgggtccttgggatctacaggaccagctggt
ctgccaggggagaaaggacagagaggtgagaatgggaagcctgggccagctggagaaaaa
ggtgataagggcccaaccggagtcccaggatttccaggtttagatggtgttcctggcctc
ccaggaagggaaggaccccgtggaaagcatggtttggacggctgcaatggctcgagggga
gacccaggattcccaggagaaaatggttatatgggaccaagaggtccttatggaattcct
gggcaaaaaggagaaaaaggaaattcagtgtatattttacattttggaaaaggacttccg
ggagagagaggtgatcctggaccccctggcctgcctggacctaggggctcaagaggtaca
acgggcccatctggatacccaggccatccaggcttgcctggtgttccaggttaccctggt
ttgccaggtgaacagggaaatccagggattggagtggatggacaaaagggggagccgggc
gacattggactgcctgggccacctgggtcaccactgttagttggacctcctggagctcag
ctgttcaaaggacaaaagggccaaaaaggattacctggggtaacaggatacagagggcca
cgtggacccaaaggcatacttgggagaggagaaaaaggtgaaaaaggccttcctggattc
cctggattgcggggtcatcctggttcttatggacctgcaggttctcctggaatgaagggt
gaaacaggatttgctggttttcctggacaacctggctatccaggcattcagggggatcca
ggagaaaaagggcccccaggtcctcctggagctgttggaactccaccgcttcctataaaa
ggtccacgaggagatcctggatttccaggtcctgttggtgaaatggggtcagttggacca
attggtccttcaggccttctaggaagaccaggatatgatggaacaagtcttcctggcctg
ccaggagtaagtggggcaccaggacctcaaggctttcaaggggaccctggtttgcctgga
acaggtgaatcaatcccaggaagaccaggatttcctggaccacccggcctaccagggcag
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgacagagggatccct
ggagaacctggaccaaaaggtcagattggccttccaggaagaaaaggggcaaagggagag
aagggaagtcaaggcctctgctcatgtggtgctggtcctcctggtgcccgtggtgtgcaa
ggacctgcaggtactccaggaaagaaaggacaaatgggatcccctggaagacacggagaa
aagggcgacccaggcttatctggtgcagtgggatcaccagggcttcctgggactcctggt
tctgctggacagcatggggaaaaaggagagaagggtgatccaggaagagttagaataaaa
ggattaaaaggtgaaagaggacctactgggcttccaggatttccaggccaaagaggtcct
gatggcagagatggagaactaggattgccaggggaaaaaggagctgagggcgattctgga
gtagcaattccgggtgacaaaggatcccctgggctcccaggacctcctggggtaaaaggc
cagatgggattgcctggcttggggcttcctgggtctccaggagccagaggtagccctgga
gactctggtgatatgggtaatgttgggccacctggtccaaaaggccagaaaggtgaaact
gtctgcattacatcaccatatcctggaaatccaggtcccccaggttttaaaggtgttcaa
ggacaaaaaggtttaaaaggactccctgggcatcctggaccaaatggctttgatgggcaa
aaaggccatcaaggaaggccaggagcaggaatccctgggccagaaggctttcgaggcaca
gctggtgatcctggtgatgaaggtgaaagaggatctacaattgatggcaaaaatggcctt
ccaggtccacctggcacagatggtcagaaaggtcttccaggtgacaccacatatggccct
ccaggaatcccaggcaccaggggactgccaggaccccctggtgcacggggagcaaggggt
aatccaggcattcctggacttcaaggacaacctggtaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggtgatgtaggagcaccaggctgtccgggcttccctggctca
ccatgtgtcccaggcttaccaggaccacctggactcagaggtgtcatgggcctgccagga
cctcaaggcttaccaggctttaaaggtcagaggggagacaggggcctggctgggccccct
ggaatcaaaggtctcaaaggctctctgggctcacgaggtctcccaggtcctccaggctca
cgaggtccaccaggacttccaggaaatagaggacctgttggcttcccaggagaaacagga
agcaaaggcattcaaggaccccagggattcccaggactcccgggaatgcaaggcccagtg
ggaatctttggtgtaaaaggtgaagaaggaaaaatgggtctacctgggcctagtggagaa
tgtggagatatgggaatgaaaggtgagagggggcctccaggagacagcggctgcgttaac
ctccgtctggagaagggccaaaggggggacccagggtttcctggggagcatggactgaga
ggtgacacaggtgaaaaaggcaatactggtttgagaggcacacgaggatttccaggaaag
aatggtgttccaggactaccaggtgaccaaggtgacactggagtgatggggtttccggga
tcacggggcttgcctggaccaaagggccttcaaggaatgacaggttttcaaggagaacca
ggtgaccagggtgatgttggcttaccaggaaaccctggatatccaggactgactggctcc
aaaggatgtaaaggcaagagaggtgacccaactcctctgcttggtacacacggtcagaaa
gggtctctgggagatccaggattgccaggacttcgtggatttccagggcagaagggttta
ccgggtatccaaggacagcctggaagaccaggctccaagggtgacccaggatatccaggg
ccacctggattaccaggagctacaggtcctcaaggattgccaggagaacctggagaaaaa
gggaaacctggaattttgggacctccaggattgcaagggttacctggatcccaaggcaga
aaaggtcttcctggacttcctgggctggatggcttggatggactaaaaggtcaaaagggt
tctgcaggagctccaggtcagagtgagaccgggcccccaggatactcaggagaaattgga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggcccccctgga
gaaaggggattcccaggatttccaggtagaagaggacctgttggacccactggacctatg
ggaagatctcctgacagtgcctcccctggtcctccgggtgatcaaggattgcctggttta
gatggcatcagaggtgatcctgggaatcctggtcctcctggagagacgatctttgtgcga
ggagatccaggtgatagtggcgttcaaggggcaccaggtaatcctgggccacgaggacag
cagggagccagaggccctccagggagccaaggaagagaaggcccaaagggtcctatgggg
gtccatggcccacagggtccacctggtgctttaggacaaccaggagaccaaggttttcca
ggaagacctggtcccagaggtcccacaggtttcataggtgaccctggtgaaccagggaaa
gtggatgattcatgccctacaatcccagggcctcctggggaagcaggccaaagaggagag
gatggctctgcaggattaccagggccaataggccaccctggaccccaaggcataaaaggt
gaagaaggatcatatggcttgccaggtcaagatgggttacctggggcacctggaccacca
ggtgaccaagggagccaaggagagcaaggatatgctgggccacaaggtccacctggccag
actggtgtcccaggacaaccaggcccccaaattagatctgcaagtggattcttgctcgtc
cttcacagtcagtcagacagagaaccactctgcccacaagggatgcccaagttatggact
ggctatagtctgctgtacctggagggacaagaaaaagcccataatcaagatcttggtctg
gcagggtcctgcctgcctgtgtttagtaccatgccctttgcctactgcaacatcaaccag
gtgtgttactatgccagccgcaatgacaagtcctactggctggccagcgcggccccgctg
cccacggcgccgctgtccgaggaggaggtccagccctacatcagcagatgtgctgtgtgt
gaggcccccgcacaggccgtggcactgcacagccaggaccagtccattcccccctgccca
cccaactggaggagcctttggataggatactcgtttttgatgcacactggatctggtgac
cagggtggtggacagtcccttatgtcacccggaagctgcctggaagacttcagatcagca
ccattcatcgagtgccagggccagcggggaacgtgtcagttctttgctaatgaatacagt
ttctggctgaccaccgtgatgcctgagctgcagtttgcatcagcccccctgtcagggact
cttaaagaaggacaagagcagaggaaaaaaatcagtagatgccaggtatgcctgaagcat
ggctaa
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