KEGG   Molothrus aeneus (bronzed cowbird): 136561268
Entry
136561268         CDS       T11621                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
maen  Molothrus aeneus (bronzed cowbird)
Pathway
maen04137  Mitophagy - animal
maen04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:maen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    136561268 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    136561268 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:maen04121]
    136561268 (AMFR)
Enzymes [BR:maen01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     136561268 (AMFR)
Ubiquitin system [BR:maen04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    136561268 (AMFR)
  Multi subunit type E3
   ERAD complex
    136561268 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    136561268 (AMFR)
SSDB
Motif
Pfam: TPR_SYVN1_N G2BR zf-RING_2 zf-C3HC4_2 CUE zf-C3HC4 zf-C3HC4_3 zf-RING_11 zf-RING_UBOX zf-rbx1 zf-ANAPC11 zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4 zf-RING_Vps41 zf_RING_Vps8 Form-deh_trans
Other DBs
NCBI-GeneID: 136561268
NCBI-ProteinID: XP_066413599
LinkDB
Position
11:complement(13114314..13140329)
AA seq 631 aa
MPLLFLERFPWPSLRTYTALSALALLGAGLSAYRALSQAPCGAAGTEPAEPQRCAGPRAL
DVAYYLLSDSLCVWVLVNTACCFLMLVAKLIQYMVFGPLRVSERQHLKDKFWNFIFYKFI
FIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLALLI
AMLLSCCGLAVVCGVVGYTHGMHTLAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWE
GKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR
HKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQ
DTSCPTCRMSLNITDSHHVREDHQRENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIAS
WLPSFSVEVMHTTNILGIAQASNSQLNVMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTD
NILEGRIQVPFPTQRADSIRPAVNNPVERHSTDQEDTGTVTQTERVPLELNSRLEEMVEF
NEMEAEPNEAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSDEELSTEKP
LPEGAAADAATLRRRTLAAAAERRLQMQQNS
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgccgctgctgttcctggagcgcttcccctggcccagcctccgcacctacacggcgctc
agcgccctggcgctgctgggcgccggcctcagcgcctaccgcgctctcagccaagcgccc
tgcggggcggcgggcaccgagccggccgagcctcagcgctgcgccggcccgcgggccctg
gacgtcgcctactacctgctctcggacagcctctgcgtctgggtactagtgaacactgcc
tgctgttttctgatgctggttgctaagctaatccagtatatggtgtttggtcctcttcgt
gtcagtgagaggcagcatctcaaggataaattctggaattttattttctacaagtttatc
ttcatttttggtgtgctgaatgttcagacagtggaagaagtagtgatgtggtgcctctgg
ttctctggacttgtgtttctccatctgatggttcagctctgcaaggatcgctttgaatat
ctttccttttctcctaccacacccatgagcagccacgtcagagtgctggccctgctcata
gccatgctcctgtcctgctgtggattagcagttgtctgtggagttgttggctacacccat
ggcatgcacacattggctttcatggcagcagagtctctgctggtgacagtcagaactgct
catgtgattttacgatatgtagttcatctctgggatctcaaccatgaaggaacgtgggag
ggcaagggcacttacgtctactacactgattttgtcatggagctaaccctgctttccctg
gatttgatgcatcatattcatatgctgctgtttggcaatatctggttatccatggccagc
ctggtgattttcatgcagctgcgctacctgttccacgaggtgcagcggcgaattcggcgg
cacaagaactacctgcgtgtggtgggaaacatggaggccaggtttgcagttgcaacacca
gaggagctggcagtgaacaatgatgactgtgccatttgctgggactccatgcagtctgca
cggaaactcccttgtggccacctcttccacaactcgtgcctgaggtcctggctggaacaa
gacacatcttgccccacctgcagaatgtctctgaatatcactgacagccaccacgtgagg
gaggatcaccagagggagaatctggatgagaacctggtgcctgtggcagcagcagaaggc
agaccccgcctgaaccagcacaatcacttcttccactttgatggctcccgaattgccagc
tggctgcccagtttttctgtggaagtgatgcacacaaccaacatccttggaattgcacaa
gccagcaactcccagctcaatgttatggcccatcagattcaggagatgttccctcaggtt
ccttatcatttagttctgcaggatctgcagctaactcgttctgtggagatcaccactgac
aacatcctggaagggcgcatccaggtgcctttccccacacagcgtgcagatagcattaga
cctgcagtgaacaaccctgtggaaaggcacagtactgatcaggaggatactggaactgtc
acacagactgagagagtgcctcttgaactgaactctagactggaagaaatggtggaattc
aacgagatggaagcagaacctaatgaagcagaagattttgaggccaggggaagtcgcttt
tccaagtcagccgatgagaggcagcgaatgctggttcagcggaaggaggacttgttgcaa
caagctcgaaagcgttacttgaacaaaacctccgatgaggagctgagcacagagaagcct
ttgcccgagggagcggcggccgacgccgccaccctgcgccgcaggaccctcgctgccgcc
gccgaacggagacttcagatgcagcaaaactcttag

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