Molothrus aeneus (bronzed cowbird): 136562422
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Entry
136562422 CDS
T11621
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen03013
Nucleocytoplasmic transport
maen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136562422 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
136562422 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maen03019
]
136562422 (THOC2)
03041 Spliceosome [BR:
maen03041
]
136562422 (THOC2)
Messenger RNA biogenesis [BR:
maen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
136562422 (THOC2)
Spliceosome [BR:
maen03041
]
Complex C
Other components
EJC/TREX
136562422 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136562422 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
136562422
NCBI-ProteinID:
XP_066415332
LinkDB
All DBs
Position
14:10081995..10131521
Genome browser
AA seq
1594 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKSEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD
QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK
ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS
GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL
CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIV
EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSI
MDQMPPFYSTSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESF
EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLL
SITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQ
TIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL
TSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYV
ANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKK
SSQRLKDALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLYDQCHDTLVQFGGFL
ASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQH
KVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVN
KLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWL
LAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDI
IYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNK
ADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQAL
ERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNG
PGGAGMPTSLTINTVRLEEGATEETADKLKEKSQGVVKVINKTVNATPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKEEKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENA
KGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKESSAKHY
INHTTPTLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKR
RKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKK
ESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctcccggccgagtggataaagaactgggagaaaggcggcaagagcgag
tttgtgcagctgtgtcgtgctctcagtgaaaacaaaaatcatgatgtgggtttcagagat
attcagcaggctttgtatgagcttgcttaccatgttgtcagaggaaacttaaagcacgat
caagcttctaatgttcttggtgatgtcatagaattccgagaagacatgccttcaatccta
gctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg
gatcattttacacaactggtattggcctgtttgtatcttgtatctgacactgtcctaaag
gagcgtttagatccagagacactggagtcattgggactcatcaagcagtctcaacagttc
aatcaaaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaatttg
ctaagagaagagaatgaaggttatgcaaagcttattgcagaattgggtcaagacttatct
ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttcaat
cttgatcctaacagagttttggatatcatcctagaagtctatgagtgcaggcctgagtat
gatgatttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaactcta
tgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagaccccttcc
tccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagatctt
tatgttcatcttctaccaggggataatgccatcattgaggaacacaagcgagagatagtg
gaagctaaacaaattgtcagaaaacttaccatggttgtcttatcatctgaaaagactgag
gaaaaggagaaagaaaaggaaaaagaggaggagaaaaccgaaaagcctcctgataatcaa
aaacttggcttattggaagccttattaaaaattggtgattggcaccatgcacaaagcatt
atggatcagatgcctccgttttactctacttcgcacaagccgatcgccatcgcgctttgc
cagctcgtccacgtgaccattgagcctctgtaccgcagagttggtgtacctaaaggagct
aaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaagcagagagcttt
gaggaattgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctgtcccac
gatcctattctatttgcaaaagtagtgcgccttggaaaagcatttatgaaagagtttcag
tctgatggaagcaaacaggaagataaagagaaaatggaaacactgttcagctgtttgttg
agtattactgatcaagtcttgcttccatctctttccttgatggactgcaatgcatgcatg
tctgaggaattatggggaatgttcaaaacctttccataccagtatcggtaccgcctctat
gggcaatggaagaatgaaacatacaacagtcacccactgcttgtgaaagttaaagcccaa
accatagatagagccaaatacatcatgaagcgtttaactaaggaaaatgtgaaaccctct
ggaagacaaattgggaagctcagccacagcaatcctacaattttatttgattatatttta
tcacaaatacaaaaatatgataacttgataactccggttgttgattcgctgaaatacctc
acttccctgaactatgatgtcttggcatattgtatcattgaagcattggcaaaccctgag
aaggagagaatgaagcatgatgacactacaatctcaagctggctgcagagtctggcaagt
ttttgtggtgccgttttccgaaaatacccaattgaactcgcaggcctcctgcagtatgta
gccaaccagctgaaagctggcaaaagctttgatttgcttattttaaaagaggtagtgcag
aaaatggcagggatagaaattactgaagaaatgaccatggagcagttggaagccatgact
ggtggagaacagctgaaagctgagggtggatactttggccaaatcaggaatacaaagaaa
tcatctcagagattaaaagatgcattattggaccatgatcttgccctcccactgtgcctg
cttatggctcaacagagaaatggtgttgtctttcaagaaggaggggaaaaacatctgaag
ctggtgggaaaactgtatgatcagtgccatgataccctggtacaatttggtgggttttta
gcatccaatctaagcacagaggattacattaagcgagtgccttctattgatgttctctgt
aatgagtttcacacacctcatgatgctgcatttttcctctcaagacccatgtatgcacac
cacatttcatccaagtatgatgaactaaaaaaagctgagaagggaaataaacagcagcac
aaagttcacaaatacattacatcatgtgagttggtgatggctcctgttcacgaagctgtg
atttctctgcacctccctaaagtctgggatgacatcagccctcagttttatgctacattc
tggtctttaacaatgtatgaccttgctgtgccacacagcagctatgacagagaagtcaat
aaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaag
aagaaagaaaaagaacgttgcacagctctgcaggacaagcttcttgaagaggagaagaag
cagttggagcatgtgcagagggttctacagagactgaaactagagaaagataactggctt
ctggcaaaatctaccaaaaatgagactatcaccaaatttttacagttgtgtatatttcct
cgctgcattttttcggcaattgatgcagtttactgtgctcactttgttgaactggtgcat
cagcagaaaacacccaatttctccacacttctctgctatgaccgagttttctctgatatt
atatatacagttgcaagttgcacagaaaatgaagccagtagatatggcaggtttttatgc
tgtatgctggagactgtgaccagatggcacagtgacagagtcatatatgaaaaggaatgt
ggcaactatccaggtttcctaactatattacgagcaactggatttgatggtggaaataag
gctgatcagttggattatgagaattttagacatgtggtacacaaatggcactataaatta
actaaggcttctgtgcactgtctggaaacaggtgaatatacgcatatcagaaacatcctg
attgtgctgaccaaaatccttccatggtatccaaaagtgctgaacctgggtcaagccttg
gaaagaagagtacacaagatatgtcaggaagagaaagagaagagacctgatctatatgca
ttggctatgggctattctggacagttgaaaagtaggaagcctttcatgatacctgaaaat
gaatttcaccacaaagacccacctgccaggaatgctgtacctgcaacagtacaaaatggg
ccaggtggtgctgggatgcctacgtctctcacaataaatacagttagactggaagagggc
gctactgaggagactgcagataaactaaaggagaagtctcagggtgtggtgaaagttatt
aataaaactgtcaacgctacaccgaaggtgacaacaagcaatggaaacagtgcatctaat
agcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggaaaaagataaagaa
aagaaagacaagactccagctgccactccggagatgaaggcacttgggaaagatgggaaa
gataaaccaaaggaagaacgggcaaacaaagaggagaaagcaagagagatcaaggagaaa
acgccaaaatctgacaaagagaaggaaaaggtgaagaaagaagaaaaagcttcaaaagaa
gaaaagtccaagacggttgttaccatcattgagtcaaagtcaactgcagaaaaggagaga
gaaaaggagccatccagagaaagagatctagcaaaggaaatgaaatccaaggaaaatgct
aaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaa
acatcagaatctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccgtca
cattcctcaacagtaaaggacaacctcaacgaactcaaggaatcttcagcaaagcactac
ataaaccacactactccaacactgtccaagagtaaggagagagaagtggagaagaaagat
ttggacaagtcaagggagagatccagagagagagagaagaaagatgaaaaggacaggaaa
gatcgaaaaagggatcattcaaacagtgaccgagaggtaccccaggattcaactaaacga
cgcaaagaggaaaatggcacaactggttcttcaaaacatagcaaaagtgaaagtccttct
gattcccctcgcttaaatgaaaaagagaaggagaaaaacaaatcaaagtcttcaggaaaa
gagaaaggtgattcaatcaaggcagaaaagatggagaagagctcctctggtagcaaaaag
gaatcaagacatgataaagaaaaaacagagaagaaagaaaagcgggacagtactgggggg
aaagaagaaaagaaacatcataaatcttcagacaagcatagataa
DBGET
integrated database retrieval system
