Molothrus aeneus (bronzed cowbird): 136564765
Help
Entry
136564765 CDS
T11621
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
maen Molothrus aeneus (bronzed cowbird)
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
maen03037
]
136564765 (WHRN)
Cilium and associated proteins [BR:
maen03037
]
Primary cilia and associated proteins
USH complex and associated proteins
136564765 (WHRN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCM2_C
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
136564765
NCBI-ProteinID:
XP_066419116
LinkDB
All DBs
Position
19:complement(2690450..2748496)
Genome browser
AA seq
920 aa
AA seq
DB search
MSAELDGVSVHSSSSSSGSLGSAAGPAPRPLSANVRRLHQALTALLSEAERERFILCLNA
YHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPP
PPAPPPVLPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGD
QILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSP
PSGLPHHQNSSLRRDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYIT
GVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLMMTVKDIGRLPHART
TVDETRWISSSQLGETLLSSAGAVGDHAMDVAARPVFYRGLAGSQVTLSTMVNQSRVMLE
EQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQD
LDRFDNLVLKREIESMKARQPAGPSPDSYSMMSYSDTVSSSSSHFTATTVSSARERLLWL
IDLMENTSELEGAGDCHQSSINTLPDVSLDDLSSFPEEPPNFKPPPPPSAPQPLDPSSAQ
PRVLGKDKPQRPSSESSQSGLFFVAPRNPSPPPNPPEKDTLSVTSTATEDSSPSAIYATI
SPLSPRSQPKDSPLSLLSQRPIGPFPRVQSPSRMKSPSPERPQSPPAPSPPPPPPHPAPP
PPDKGSPPAVGNQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTLSEDSGVD
IGELETSGKDRSRQPGPGKSRSPKEATRSEGAAEGASKPPGLLEPTSCLIRVSKSAPTLG
IAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKEHREAARIIAEA
FKLKEKDYIDFLVTEFNVAL
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagctggacggcgtgtccgtgcactcctcctcctcctcgtcgggctcgctg
ggctcggcggcggggccggcgccgcggccgctctcggcgaacgtgcggcggctgcaccag
gcgctcacggcgctgctgagcgaggcggagcgggagcgcttcatcctctgcctcaacgcc
taccacggccgccgcaacgtctgcgacctggtgcgctccctgcgcgccctcctcgacggg
ccccgccgccggcagctgctgccgctgctgcgcctcgtcctgccgcgctccgaccagctc
ctcttcgaccagtacacggccgaggggccctacctgccgccgcccggccgccccccgccg
ccccccgccccgccgccggtgctcccgggcgagctgcggcaggtgacgctgcgccggagc
aaagcccacgagggtctgggcttcagcatccgcggcggtgccgagcacggcgtgggcatc
tacgtgtcgctggtggaacccggctctctggccgagcgggaggggctgcgggtcggcgat
cagatcctgggggtcaacggcaagtccctggacagggtgacccacgccgaggcggtcaag
gtgctgaagggctgcaagaagctgaacctgtcggtgcactcggtggggcgcatccccggg
ggttatgtcaccaaccacatctacacctgggtggacccccagggccgcagcgtgtccccc
ccctcggggctgccccaccaccagaacagctccctgcgcagggacagcgagaagaggagc
cacctgcagctcctgcaggagggggatgagaagaaggtgaacctggtcctgaatgaaggg
aaatccctgggcctcatgatccgaggaggggcagaatattccctgggcatctacatcacg
ggcgtggacaagggctccgaggcagagagcactggcttgaaggtgggagaccagatcctg
gaggtgaatggccggagcttcctgagcatcccccacgacgaggccgtgaagctgctcaag
tcctcacggcacctgatgatgacggtgaaggacatcgggcgcctgccccatgcccgcacc
accgtggatgagacccgctggatcagcagctcccagctcggggagaccctgctcagctct
gcaggggcagtgggtgaccatgccatggacgtggcagccaggcccgtgttctaccggggc
ctggccggctcgcaggtgaccctgagcaccatggtgaaccagagccgggtgatgctggag
gagcaggcccggcacctgctcaacgaacaggagagggccaccatgggctactacctggac
gagtacaaggagggcaacatctccgtggatgctctggtcatggccctctttgagctgctc
aacacacacgccaagttctcactgctctctgaggtgaggggggtgatctccccacaagac
ctggaccgctttgacaacctggtgctcaagagggagatcgagtccatgaaggcccggcag
cccgcggggcccagccccgactcctactccatgatgtcctacagcgacaccgtctcgtcc
tccagcagccacttcactgccaccaccgtcagctcggccagggagcggctcctgtggctc
atagacctgatggagaacacgtcagagctggagggagctggggactgccaccagagcagc
atcaacaccctgccagatgtgtccctggacgatctctcctccttccctgaggaaccgccc
aacttcaagcctcctcctcctccctcagcgccccagcccctggacccctcctcagcccag
ccccgtgtcctggggaaggacaagccccagcgcccctcctccgagtcctcccagtccggc
cttttcttcgtggccccccggaacccctctccccctcccaacccccccgagaaggacacg
ctcagtgtcacctccacggccaccgaggactcctcccccagcgccatctacgccaccatc
tcccccctgtcccctcgcagccagcccaaggacagcccgctctccctgctcagccagcgc
cccatcgggcccttccccagggtgcagtcccccagcaggatgaagagcccatccccagag
aggcctcagagccccccggccccgtcccctcctcctccgccccctcaccccgcgccgcct
cccccggacaagggcagccccccggccgtgggcaaccagcatttcatcatggtggaggtg
caccagcccaacagcgagcctgacgtcaacgaagtgaggcccctgccccaggccagagcc
tccacgctctcccagctgtcggacagcgggcagaccctcagcgaggacagcggggtggac
atcggggagctggagacgagcggcaaggacaggagccggcagccaggccccgggaagagc
cgcagccccaaggaggccaccaggagcgagggggcggcagaaggggcctccaagccgcca
gggctcctggagcccacgtcgtgtctgatccgggtgtccaagagcgctcccaccttgggc
atcgccatcgagggcggcgccaacacgcggcagccgctgccccgcatcgtcaccatccag
cggggtggctcggcacacaactgcggcaagctgaaggtgggacacgtcatcctggaggtg
aacggcacggggctgcggggcaaggagcaccgcgaggccgcccgcatcatcgccgaggcc
ttcaagctgaaggagaaggactacatcgatttcttggtcacagagttcaacgtggccctt
tag
DBGET
integrated database retrieval system
