Molothrus aeneus (bronzed cowbird): 136564935
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Entry
136564935 CDS
T11621
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
136564935 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maen03400
]
136564935 (LIG3)
Enzymes [BR:
maen01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
136564935 (LIG3)
DNA repair and recombination proteins [BR:
maen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
136564935 (LIG3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
aRib
FMP23
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
136564935
NCBI-ProteinID:
XP_066419368
LinkDB
All DBs
Position
20:complement(5558096..5572574)
Genome browser
AA seq
978 aa
AA seq
DB search
MPTGGRTLSHAARALGRGTALFCPRPQLPVPRPLSRRAGARRGCWCQLLFQPVPVPSPQP
AFPLSLLLGSWLRSACAAAGDMAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIGKIVPNP
FTESGGDMKEWYHVKCIFEKLDKARATTKKIEDITDLEGWEELQDEEKETINKYISEANS
KTGGTPKKKVIVQAKLTATGQLTTKDPPKKFSGFSAKPKSSEDSPAKCAQKPSLSAARCD
PQHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLRKGSAGDGFHGDVYLTIKMLLPGVI
KIVYNLNDKQIVKLFSRIFNCNQEEMVRDLEQGDVSETIRIFFEQSKTCPPAAKSLLTIQ
EVDEFLMQLSKLTKEDDQQSVLQQISRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDP
NAYEAFKASRNLQDVVERVLQNQQEAEKVPGLKKTLSVQASLMTPVQPMLAEACKSIEYA
MKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGGQSM
ILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDISLMDRPLCERRK
FLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLVLKDLKGNYEPGKRHWLK
VKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCSGGHDD
ATLARLQTELDMVKISKDPSKIPRWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKAEAH
TADGISIRFPRCTRIRDDKDWQTATNLQQLKELYQLSKEKADFSVTAGEEDESTAGSSGE
NDGNSRSSTPHSSIKSPPSKSPAKAQKAEDSKGVIGSPQKSEERRGEKRKASEMEDNGKK
QPLLDIFTGVKLYLAPSVPDFARIRRYFIAFDGDLVEEFDTASATHVLGDIDDNPGAQRV
TPRWIWECIRKRRLVAPC
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgggcggcaggacgctgtcacacgctgcccgcgctctcggcaggggcacagcg
ctgttctgccctcgcccacagcttcccgtgcccaggccgttgtcccgccgtgccggagcc
aggcgcgggtgctggtgccagctgctgttccagcccgtccctgtgccatccccgcagccc
gcgtttcccctgtccctgctgttgggcagctggctgcgctcggcctgcgcggctgccggg
gacatggcggagcagcggtactgcgtggactatgccaagcgaggcaccgcgggctgcaag
aagtgcaaggagaagatcgtgaaggggatggtgcgcattgggaagattgttccaaatcct
ttcaccgagtctggaggggacatgaaggagtggtaccatgtcaagtgcatctttgagaag
ctggataaggcccgggccaccactaagaaaattgaagacatcacagacttggaggggtgg
gaagagctgcaggatgaggagaaagaaacaatcaacaagtacatctcagaagccaattcc
aagactggaggtaccccaaagaaaaaggtgatagtgcaggcaaaactcactgccacagga
cagctgaccacaaaagatccaccaaagaaattctctggattctctgccaagccaaagagt
tcagaagattctcctgcaaagtgtgcccagaagccgagcctgtctgcagccaggtgtgac
ccccagcacaaggactgcctgctgcgcgagttccgcaagctctgcgccatggtggccgag
aaacccagctacaatgtcaaaacccagatcatccaggacttcctcaggaagggatctgca
ggagatggttttcatggtgatgtatacctgaccattaagatgctgttgccaggtgtcatt
aaaatcgtttacaacttgaatgataagcagattgtaaagctgttcagcaggatttttaac
tgcaaccaggaagaaatggtccgggacctggagcagggagatgtttctgagaccatacgg
atcttcttcgagcagagcaagacctgtcctccagcagccaagagcctcctgaccatccag
gaggtggatgagttcctcatgcagctgtccaagctcaccaaggaggatgaccagcagagt
gtcctgcagcagatcagtcgcaggtgtacaggcaacgacctgaagtgcatcatcaggcta
attaagcatgacttgaaaatgaatgctggagcaaagcatgtgttggacgctctggatccc
aacgcctatgaggcgttcaaggcctcgaggaacctgcaggatgtggtggagagggtgctg
cagaaccagcaggaggcagagaaggtgccagggctgaagaagaccctgagcgtgcaggcc
tcactcatgaccccagtgcagcccatgctggctgaggcctgcaagtccatcgagtatgcc
atgaagaagtgtcccaacgggatgtacgccgagatcaagtacgacggcgagcgcgtgcag
gtgcacaagaatggggatcacttcagctacttcagcaggagcctcaagcctgtgctcccc
cacaaagtagcccattttaaggatttcatcccccaggctttccctggtgggcaaagtatg
attctggattcagaagttctcctgattgacaataaaactggcaagccacttccttttggg
actcttggtgtgcacaagaaagctgctttccaggatgccaacgtttgcctgtttgtgttt
gactgcatctacttcaatgacatcagcctgatggacaggcccctctgtgaacggcgcaag
ttcctccacgacaacatggtggagatccccaacaggatcctgttctcagagatgaaacat
gtcacaaaagcttcagatctggcagacatgatcacccgggtcatccgcgaggggctggaa
gggctggtgctgaaggacttaaagggtaattatgagccagggaaacgccactggctgaag
gtgaagaaggattatctcaacgagggggcaatggctgacactgctgacctggtggtgctg
ggggctttctatggacaaggcagtaaaggtgggatgatgtccatcttcctcatgggctgc
tatgaccccaagagtgagaagtggtgcacggtgaccaagtgctctggtggccacgatgac
gccaccctggcacgtctgcagacagagctggacatggtgaagatcagcaaggatcctagt
aaaattccaaggtggctaaaaattaacaaaatctactacccagatttcattgtcccagat
ccaaagaaagccccggtgtgggagatcacgggggccgagttctccaaggccgaggcgcac
acggctgacgggatctccatccgcttcccgcgctgcacccgcatccgggatgacaaggac
tggcagacagccaccaacctgcagcagctcaaggagctgtaccagctctccaaggagaag
gctgatttcagtgttacagctggggaggaagatgagtccacagctggcagcagtggagag
aatgatgggaattccaggtcttccacccctcacagcagtattaagagtcccccaagcaag
tcacctgcaaaagcccagaaggcagaagacagcaaaggagtcattggatcccctcaaaaa
tccgaggagagacgaggggagaagagaaaagcatctgagatggaggacaatggaaaaaag
cagcccctgctggacattttcacgggggtgaagctgtacctggcgccctcggtgccggac
tttgcgcggatccgccgctacttcatcgccttcgacggggacctggtggaggagtttgac
acggcctcggccacccacgtgcttggggacattgatgacaaccccggggcgcagcgggtg
actcccaggtggatctgggagtgcatccggaagcgcaggctggtggcgccgtgctag
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