Marinitoga aeolica: JRV97_01705
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Entry
JRV97_01705 CDS
T09568
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
maeo
Marinitoga aeolica
Pathway
maeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JRV97_01705 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maeo03019
]
JRV97_01705 (rnr)
03016 Transfer RNA biogenesis [BR:
maeo03016
]
JRV97_01705 (rnr)
Enzymes [BR:
maeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
JRV97_01705 (rnr)
Messenger RNA biogenesis [BR:
maeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JRV97_01705 (rnr)
Transfer RNA biogenesis [BR:
maeo03016
]
Prokaryotic type
tRNA degradation factors
JRV97_01705 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
DinI
OB_RNR_2nd
Motif
Other DBs
NCBI-ProteinID:
WGS65296
UniProt:
A0ABY8PRP5
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All DBs
Position
365220..367439
Genome browser
AA seq
739 aa
AA seq
DB search
MKQNIKEKILKLLQKKPLLQKEIYEKLKAQSKEEKRKIRTILKELQEDGELYKNSKNRFC
TLGKNMKIGIIEFTRRGSMAFVTTKNGDEIAITLENAKDAMHKDTVLIEIIGTWRDIPKG
KVLRVLKRGITKVVGIFEPKKLFGFVLPIDQKINTDFYVSPENFNKAKPGQIVEAEIIKY
TRKNPEVKITRIIGNVNDPKVDLPIVIIKHDLPEPGKFPEKVMKEALAIPQTVQKKDLKG
RKDFRNEIIVTIDGDNAKDFDDAVQVKKLDNGNYLLGVHIADVSHYVKENSNLDKEAFQR
GTSVYLIDTVIPMLPHELSDWICSLVEGEDRLTMSLIMEIDENGDVVNFDVYNGVINSKK
RLTYNKVNKLLNNEADEELEKEIGWLRPNLELMKELMEIIRENRRRRGAILDIEGGEVQF
IFDENGNVKDIIPVERGISEVIIEEFMIKANETIASIFDSQGLPFIYRIHEEPDPDMLLQ
LKNYLEIMGLRYKFPKNIHPKLLQDMLEHLKEHPLRKSIQKLLVRSLKRAVYSDLNVGHF
GLASQNYTHFTSPIRRYPDLIVHRLLKKYLKNKGTLKNSEIEKYTELLPEIASHSSKRER
VANEAEWDLADMKKVEYLMGHIGKTFDVYITNITKFGIFVEIPEKLIQGLIHVSTMDDYY
VYNEKQNVLIGERTKKVYKLGDKLKAKVVNANKLTAEIDFEIVNKNDDNLEKELKKTYPN
AKVKIKKNKKRKIKKEKSN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaatataaaagaaaaaatattaaaattactacaaaaaaaaccattattacaa
aaggagatatatgaaaaattaaaagcacaatcaaaagaagaaaaacgaaaaatacgaact
atattgaaagaattacaggaagatggagaattatataaaaattcaaaaaatagattttgt
accttaggaaaaaatatgaaaattggaataattgaattcaccagaagaggtagcatggct
tttgtaacaactaaaaatggagacgaaattgcaattacactagaaaatgcaaaagatgcc
atgcataaagatactgttttaattgaaataatcgggacatggagggatatcccaaaaggt
aaggtcttaagagtattaaaaagaggaataacaaaagttgttggaatatttgaacctaaa
aaattatttggttttgttttacctatagatcaaaaaataaacaccgacttttatgtttca
cctgaaaactttaataaagcaaaacccggtcaaattgttgaagcagaaataataaaatac
accagaaaaaacccagaagttaaaataacaagaattataggtaatgttaatgatccaaaa
gtggatttacctattgttattataaaacacgatttaccagaacccggaaaatttccagag
aaagtgatgaaagaagctttagcaatacctcaaacagttcaaaagaaagatttaaaaggt
cgaaaagattttagaaatgaaatcatagttacaatagatggagataatgctaaagatttt
gatgatgctgttcaggtaaaaaaattagataatggaaattatctacttggagtgcatatt
gctgatgtttctcattatgtgaaagaaaattccaatcttgataaagaagcttttcagcgt
ggtacaagcgtttacttaatagatactgttattcctatgttacctcatgagctttctgat
tggatatgttctttagttgaaggcgaagatagattaacaatgtctttaattatggaaata
gatgaaaatggtgatgttgtaaattttgacgtttacaatggagttataaacagtaaaaaa
agacttacctataacaaagttaataaattattaaataatgaagccgacgaagaattagaa
aaagaaattggctggttaagaccaaacttggaacttatgaaagaacttatggaaataata
agagaaaataggagaagacgtggagctattttagatatagaaggtggggaagttcaattt
atattcgatgaaaatggaaatgttaaagatattattcctgttgaacgcggaatttcagaa
gttattattgaagagtttatgataaaagcaaatgaaacaattgcctctatttttgattct
cagggattgccatttatctatagaatccacgaagaacctgatcctgacatgctattacaa
ttaaaaaactatctggaaataatgggattgagatataaattcccaaaaaatatacatcca
aaattattacaagatatgttagaacatttaaaagagcatcctctaagaaaaagtatacaa
aaactattagttcgttctttaaaacgagctgtatattctgacttaaatgttggtcatttt
ggtttagcttctcaaaattatactcatttcacatctcctataaggaggtatccagattta
attgtgcacagattgttaaagaaatacttaaaaaataaaggaactttaaaaaacagtgaa
attgaaaaatatacagaattacttccagaaatagcttctcatagttcaaaaagagaaaga
gttgctaatgaagctgaatgggatttagctgatatgaaaaaagtagaatatttaatggga
catattggtaaaacttttgatgtttatattactaatataacaaaatttggtatatttgtt
gaaatacccgaaaagcttattcaaggattaattcatgtttctacaatggatgattattat
gtatataatgaaaaacaaaatgtcttaattggagaaagaactaaaaaagtttataaatta
ggagataaactcaaagctaaagtagtaaatgcaaacaaattaactgcagagattgatttt
gaaattgtaaacaaaaatgacgataatttagaaaaagaattaaaaaagacatatccaaac
gctaaagtcaaaataaagaaaaataaaaaaagaaaaataaaaaaagaaaaaagtaattaa
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