Marinitoga aeolica: JRV97_02800
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Entry
JRV97_02800 CDS
T09568
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
maeo
Marinitoga aeolica
Pathway
maeo03420
Nucleotide excision repair
maeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JRV97_02800
03430 Mismatch repair
JRV97_02800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maeo03400
]
JRV97_02800
Enzymes [BR:
maeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JRV97_02800
DNA repair and recombination proteins [BR:
maeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JRV97_02800
MMR (mismatch excision repair)
Other MMR factors
JRV97_02800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_11
AAA_30
ResIII
DEAD
RGI1
Helicase_RecD
SPP1_GP23-1
Motif
Other DBs
NCBI-ProteinID:
WGS65499
LinkDB
All DBs
Position
579939..581918
Genome browser
AA seq
659 aa
AA seq
DB search
MEEKVFNIKKSEYVIPEFFKEELDEEQLKAVTNSTGRSLIIAGPGSGKTRVITYKIAYLL
SQGIKPENILLVTFTRASAKEMIERVKNVTNIDTSSLTAGTFHHVCNMLLRRYAKILGYE
NNFSILDSEDAKDLMRIAKNEYKGNLTKEEAKQIPNEGVILKIVGYAANTIKSLREAILD
IAPYLIDYEDDIEKIYMNYLELKQKINAMDYDDMLVNTLRLLENNEDIRNHISSKYKWVL
VDEFQDTSLVQLRIVEFLSSVHKNLIVVGDDSQSIYSFRGSRFENVEDFQNHEDVKLFKI
QTNYRSVPEIVELENYLIPTHSIPKKLKPFRSSYNFKPKIVKTYDELEQAEFVVQLIENK
FDEGISPEDIAILYRSHSLSMTLQQKLDANKISYKLLSGKRFIETRHIKDIMAFLKIINN
PFDNISWSRVLKLFPGIGQKTMVKITNEFYANLMEYTTPYDAFEHINLKKYPKLKDIILY
LYENETENPQDLIDYIYLEFYREYLELNFKDAYSRKLDVERLSEIASRYETLDKFLEELA
LSENIEIQGAEKDRKTEKITLTTVHGAKGLEWKVVIIISVNPGDFPNGMALKEKKLDEEE
RLFYVAVTRAKDELYIVKQLTGTAKPYYGNSFYMRQKLPDFTDKIPNRLVEYWKIGYTE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaagtttttaatataaaaaaaagtgaatatgttattccagagtttttcaaa
gaagaacttgacgaagaacagttaaaagcagttaccaattctaccggaaggtctcttata
atagctggcccgggttcagggaaaacccgggtcattacatataaaatagcttatttatta
tcacaaggaataaaaccagaaaatattctacttgttacttttacaagagcgtctgctaaa
gaaatgatagaaagggttaaaaacgttactaacatagacacttcttcattaaccgcagga
acattccatcacgtgtgtaatatgcttttaaggcgatatgctaaaatccttggttatgaa
aataatttttctattcttgattccgaagatgccaaagatttaatgaggattgctaaaaat
gaatataaaggcaatttaactaaagaagaggctaaacaaataccaaatgaaggtgttatt
ctaaaaattgtgggatatgctgctaataccataaaatcattaagagaagctattttagat
atagctccatatttaatagattatgaagatgatatagaaaaaatttatatgaattattta
gaattaaaacagaaaataaatgctatggattatgatgatatgttagtaaacacattacgt
cttttagaaaataatgaagatattagaaatcatatttcttcaaaatataaatgggtattg
gttgatgaatttcaggataccagtttggttcaattgagaatagttgaatttttatccagt
gttcataaaaatctaattgtagttggtgatgattctcaaagtatatattcatttagagga
tcaagatttgaaaatgttgaagattttcaaaatcacgaagatgtaaaattatttaaaatt
caaacaaactatagaagtgttcctgaaatagttgaacttgaaaactatttaattcctaca
cattctataccaaaaaaactaaaaccttttagatcatcttataattttaagccaaaaatt
gtaaaaacatatgatgaattagaacaggcagaatttgttgttcaattaatagaaaataaa
ttcgatgaaggcatttcaccagaagatattgctatattatatcgttctcacagtttatct
atgacattacaacaaaaacttgatgcaaataaaatatcctacaaattattatctggaaaa
agatttatagaaacaagacatattaaagatattatggcatttttgaaaataataaacaac
ccttttgataatatatcttggtcaagagtattaaaattatttcctggaattggtcaaaaa
acaatggtaaaaatcacaaatgaattttatgcgaatttaatggagtatactacaccatat
gatgcttttgaacatattaatttaaagaaataccctaaattaaaagacattatattatac
ctatatgaaaacgaaacagaaaacccacaagatttaatagattatatttatttagaattt
tatagagaatatcttgaattaaattttaaagatgcttattcaaggaaattagatgttgaa
agattatcagaaatcgcctcaagatatgaaactcttgataaattccttgaagaattagcc
ttaagtgaaaacattgaaatacaaggtgcagaaaaggatagaaaaactgaaaaaataact
ttaaccactgttcatggtgcaaaagggcttgaatggaaagttgtaataataatttcagta
aaccctggtgattttcctaatggcatggctttaaaagaaaagaaattagacgaagaagaa
aggcttttttatgttgcagtaacaagagctaaggatgaattatatattgtaaaacaatta
actggtactgccaaaccttattatggtaattcattttatatgaggcaaaaacttccagac
tttacagataaaataccaaatagacttgtcgaatattggaaaataggatatacagaatag
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