Marinitoga aeolica: JRV97_06765
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Entry
JRV97_06765 CDS
T09568
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
maeo
Marinitoga aeolica
Brite
KEGG Orthology (KO) [BR:
maeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maeo03019
]
JRV97_06765
Messenger RNA biogenesis [BR:
maeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JRV97_06765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Cas3_HD
DUF4131
DUF2096_N
Motif
Other DBs
NCBI-ProteinID:
WGS64080
LinkDB
All DBs
Position
complement(1457388..1458425)
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AA seq
345 aa
AA seq
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MKNNGVNLGDLLKEKGQIFDKMIEDVYISDLKPNDNKEIEGKVLSKRLQTTKDGKEFLLF
TIGDKSGTLRAIDWFNARENSEKINIGDIIRVKGKIVVFESRLQLNVEKNYEIYKLNENE
INPEKFIKTSSKNIQQLKNELFSIIDSINNEYIKELLKYIFIKDKKFADSFSYAPAAINV
HHAYKHGLLEHTIDVAKLCNGIANNYKNLVNKDILIAGALLHDIGKTKEYKITPSGIEKT
DEGELIGHIAIGIHMVSDYAKKISNFPKHILNEILHMIASHHGELEWGSPIVPKTIEAFI
LHFADNLSSKVEQVRSHIEESNNEHWTDYHKNLGRKIKITKTEDK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacggtgtaaacctgggtgacctgttaaaagaaaaaggacaaatattcgat
aaaatgattgaagatgtttacatttcagaccttaaaccgaatgacaacaaagaaattgaa
ggtaaagttctgagcaaacgacttcaaacaacaaaagatggaaaagagtttttacttttc
acaataggtgataaaagcggcacattaagagctattgattggtttaatgccagagaaaat
tcagaaaaaattaatattggagatataattcgtgtaaaaggaaaaattgtagtttttgaa
agtagattacaattaaatgtagaaaaaaattatgaaatctataagctaaatgaaaatgaa
ataaatccagaaaaattcatcaaaacttcttctaaaaatattcaacaattaaaaaatgaa
ttattttcaataattgatagtataaacaatgaatatataaaagaattattaaaatatatt
tttataaaagataaaaaatttgcagactcattttcatatgctccagccgcaattaatgtt
catcatgcatataagcatggattattagaacacactatcgatgttgcaaaattatgtaat
ggcattgcaaataactataaaaacctggtaaataaagacatattaatagcgggagcgcta
cttcacgatatagggaaaacaaaagaatataaaattacaccatccggaatagaaaaaaca
gacgaaggtgaattaattggacatattgctataggtattcatatggtttccgattatgct
aaaaaaataagtaattttccaaaacatatactaaatgaaattttacatatgattgcatca
catcatggagaattagaatggggaagtccaattgtccctaaaaccattgaagcgtttata
cttcattttgctgataacctgagctcaaaagttgaacaggttagaagtcatatagaagaa
tcaaataatgaacactggacagattatcataaaaatcttggtaggaaaataaaaattaca
aaaacggaggataaataa
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