Marinitoga aeolica: JRV97_06970
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Entry
JRV97_06970 CDS
T09568
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
maeo
Marinitoga aeolica
Pathway
maeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JRV97_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maeo03021
]
JRV97_06970
03400 DNA repair and recombination proteins [BR:
maeo03400
]
JRV97_06970
Enzymes [BR:
maeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JRV97_06970
Transcription machinery [BR:
maeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JRV97_06970
DNA repair and recombination proteins [BR:
maeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JRV97_06970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WGS64120
LinkDB
All DBs
Position
complement(1501880..1506613)
Genome browser
AA seq
1577 aa
AA seq
DB search
MGKMTSSFKRKIAKIKVGIASPERIREWSSGEVKKPETINHRTFKPERDGLFCEKIFGPV
KDYECTCGRYKGKKYEGTVCERCGVKVESKEARRRKMGHIELAAPVVHIWFLKSSPSILS
ILLNIPVKELENIIYYGSKRVVEKIWLITDPKDSDMFDYGDMLHNTEYEIFKEKMNFEVE
QAVKVLHVKNKPIAKRSGVVSIETEMTQAKHEITWVKITDENGVEEKWPIFEGSTLFVED
GDEIEEGTQLADTFLYEEEILTASEYLIFEQFYPSAIEIERDIERDTPILVITAIDPEVE
KEIGKGIGSTLLQEEYEAYYELYGDKITADYGGEAIKKLLKNIDLHELKIQLEAELAKLD
KKSAKALKLIKRLKVVKDFLKSGNKPEWMIIEALPVVPPDIRPLIQIDGGRFAATDLNDL
YRRVINRNNRLQKLFEIEAPEIIIRNEKRILQQAVDSLIYNGRVGKAMTDRSGRPLRSLT
DLIKGKKGRFRRNLLGKRVDYSGRAVIVVGPELKIHECGLPKKMAMELFKPFVLNKLLKD
SNASSKNARKLKKTIIEKEMPEAWEMLEEVIKGHPVMLNRAPTLHRISIQAFIPRLIEGN
SIQLHPLVGPPFNADFDGDQMAVHVPLSNIAQAEAKFLMLSRYNIISPANGKPISMPGKD
MIAGAYYLTTVDQKYFDSKKLPENPNDLIENNNKIKYIFGDEFQAFYVHEYEKITNHEVV
VENGKLKWSKPTLVLHEPIGLYNNGEIIKTTVGRLIFKEILPEPIGRFKPDFNKIYKKKE
IKNLIFDTFKYHGIDRTADLLDDIKFLGFHYATVSGLTISVRDIVESKERLEIIKKSEET
VMEIEKYYEEGYLTDEQRYKEVVKVWEKTIAAVTEVTSKEFKKYPFNPVWMMVDSGARGN
IDQLKQLAGMRGLMADPSGKVIELPIKSNFRNGLSELEFFISTHGARKGSADTALRTSTA
GYLTRRLVDVAQSITVTEPDCGTEKGIEARELIADGLRIEKLADYLFGRVLAKDVLDPQT
DEIISHPETGKKYVKDVMLDEEDAEFLANYKTKIPVVKTIDNIEIDKINLYLYNILNNDV
LVDGELLFSKGTKIDNDVILSLKQHNVKTVNIKEYKAVNFVFVGDNLKVEDENGKLITLA
NYQEKIDEDTARKLERYNISEIEVRPSIYVRSILTCEAEHGVCAKCYGMDLSNHKIVNIG
ESVGIIAAQSIGEPGTQLTMRTFHTGGIATAGDITQGLPRAEELFEARKNLKGPEAEFST
VKGIVRKIDRDEKGRLVFIVEDLKGELYTYTADPKVKPTVSEGDKVEPGYRLTSGNIKPR
RLLEELGAEVTFDYLLKEIKKIYAEQGVEIHDKHFEIIIKQMFNKVEITYAGDTDFMPKD
LVNIKAVEKVNKKIYEENKKIEENREDIIGKKLAEKISIKNDDGNEIIGDVGDEVTEELL
NKIIEVGIKEVEVFKTEPQLLETEDGEIRLVGEKKAYLINPKEPARFERKLLRITKSSLE
REGWLGAASFQQTVQVLTEAALEGREDYLMGLKENVIVGQPIPAGTGLKAFLESEISVFE
LPTFPTEETQSEESAAS
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaatgacatcatcatttaaaaggaaaatcgcaaaaatcaaagtgggaatcgct
tctccagaaaggataagagaatggtcaagtggagaagtaaaaaagcctgaaactattaat
cacagaacctttaaaccagaaagagatggtttgttctgtgaaaagatttttggtcctgta
aaagattatgagtgtacttgtggcagatacaaaggtaaaaagtatgaaggtacagtatgt
gaaagatgtggagttaaagttgaatctaaagaagccagaagaagaaaaatgggacatata
gagttagccgctcccgttgtacacatctggttcttaaaatcttcaccttccattttatct
atactattaaatataccagtaaaagaactagaaaatattatttattacggatcaaaaagg
gtagttgaaaaaatttggttaattacagacccaaaagattctgatatgtttgattatgga
gatatgctccataacaccgaatatgaaatttttaaagaaaaaatgaatttcgaagtagaa
caggcagtaaaagttttacatgtaaaaaataaaccaattgctaaaagaagtggtgttgta
agcatagaaacagaaatgactcaagcaaaacatgaaattacatgggtaaaaattacagac
gaaaatggtgtagaagaaaaatggcctatctttgaaggatccacattattcgttgaagat
ggtgatgaaatagaagagggtactcagttagctgatacattcttatatgaagaagaaatt
ttaacagccagtgaatatttaatttttgaacagttctatccttccgcaatagaaatcgaa
agggatattgaaagagatactcctatattagttataactgctatagatcctgaagttgaa
aaggaaattggtaagggcataggaagcacgttattacaagaagaatatgaagcatattat
gaactttatggtgataaaataactgctgattatggtggagaagctattaaaaaattactt
aaaaatattgatttacatgaattaaaaatacaattagaagctgaattagcaaaattagat
aaaaagagtgcaaaagctttaaaactaattaaaagattaaaagtagtaaaagattttctt
aaatccggtaacaaaccagaatggatgataatagaagcattaccagtagttccaccagac
ataagacctttgattcaaatcgatggtggtaggtttgcagctactgatttaaatgatcta
tatagaagagttataaacaggaataatagacttcaaaagttatttgaaattgaagcacct
gaaataattataagaaatgaaaaaagaattctacaacaagctgtagactccttaatatat
aatggtcgtgtaggtaaagctatgaccgatagaagtggaagacctttaaggtcattaaca
gatttaatcaaaggtaaaaaaggaagatttagaagaaatcttcttggaaaacgtgttgat
tattcaggaagggccgttattgttgttggtcctgaattaaaaatacatgaatgtggtctt
ccaaagaaaatggctatggaattattcaagccatttgtattaaataaattattaaaagat
tccaatgcatcaagcaaaaatgcaagaaaattaaagaaaactattatagaaaaagaaatg
ccagaagcatgggaaatgcttgaagaagtaattaaagggcatcctgtaatgttaaacaga
gctcctacattacatagaatttctattcaagcatttattccaagactaatcgaaggcaat
tctattcaattacatccattggtaggtcctccatttaatgctgattttgatggagaccag
atggctgttcatgttccattatcaaatatagcccaagctgaagctaaattcttgatgcta
tcaagatataacatcatatcaccagctaatggtaaaccaatatccatgcctggtaaagat
atgattgcaggtgcttattatttaactactgttgatcaaaaatattttgattctaaaaaa
ttacctgaaaatccaaatgatttaatagaaaataacaacaaaattaaatatatatttgga
gatgaattccaggcattttatgtacatgaatatgaaaaaataacaaatcatgaggtagtc
gtagaaaatggaaaattaaaatggtcaaaaccaactctcgtactacatgaacctattggt
ttatataataatggcgagattattaaaaccactgtaggaagattaatattcaaagaaata
cttcctgaaccaattggaagatttaaacctgatttcaataaaatctataaaaagaaagaa
attaaaaatcttatatttgacacatttaaatatcatggaattgacagaacagctgaccta
ttagatgatattaaattcttaggtttccattacgcaacagtatcaggattaacaatttct
gtaagagatattgttgaatcaaaagaaagattagaaattatcaaaaaatcagaagaaaca
gttatggaaattgaaaaatattatgaagaaggttatctaacagatgagcaaagatataaa
gaagttgttaaagtttgggaaaaaacaattgccgcagttacagaagtaacaagtaaagaa
ttcaaaaaatatccttttaatcctgtgtggatgatggttgattctggagccagaggtaat
attgaccaattaaaacagcttgctggtatgagggggcttatggctgatccatcaggtaaa
gttatagaattacctattaaatctaacttcagaaatggtttatcagaattggaattcttt
atttctacacacggagctaggaaaggttctgctgatacagctctaagaacatctacagct
ggttatttaacaagaagattagttgatgttgcacaatcaattactgtaactgaaccagat
tgtggcacagaaaaaggtattgaagcaagagaattaatagctgatggattaagaattgaa
aaacttgctgattatttattcggtagggttttagctaaagatgtattagacccacaaact
gatgaaataatatcacatccagaaacaggtaaaaaatatgtcaaagatgttatgttggat
gaagaagatgctgaattcttagcaaattataaaacaaaaattccagtagttaaaacaatt
gataatattgaaattgataagattaatctatacttatataacatattaaataatgatgta
ttggttgatggtgaattgttattctcaaaaggcacaaaaattgataatgatgtaattctt
tcgttaaagcaacacaatgtaaaaaccgttaatatcaaagaatataaagctgttaatttt
gtatttgtaggcgataatctaaaagtcgaagatgaaaatggaaaactaattacattggca
aattatcaagaaaaaattgatgaagatacagcaagaaaattagaaagatataatatttca
gaaatcgaagttagaccttcaatttatgtaagatctatattaacctgtgaagctgagcat
ggtgtttgtgctaaatgttatggtatggacttatcaaatcataagatagtaaatattggt
gaatcagttggtattatagctgcacaatcaattggagaaccaggtactcagttaacaatg
agaacattccatactggtggtattgctacagctggtgatattacacaaggtcttccaaga
gctgaagagttattcgaagcaagaaagaatttaaaaggtcctgaagcagagttctcaact
gtaaaaggtatagttaggaagatcgacagagatgaaaagggaagacttgtatttattgtt
gaagatttaaaaggtgaattatacacatacacagcagatccaaaagttaaaccaacagtt
tctgaaggagacaaagtagaaccaggttataggttaacttctggtaatataaaaccaaga
aggttattagaagaattaggtgcagaagttacatttgattacttattaaaagaaattaaa
aagatttatgcagaacaaggtgttgaaattcacgacaaacattttgaaattatcattaaa
caaatgttcaataaggttgaaataacatatgctggagatacagactttatgcctaaagac
ttagtaaacattaaagctgtagaaaaggtgaataaaaagatttatgaagaaaacaaaaag
attgaagaaaatagagaagacattattggtaaaaaattggctgaaaaaatctctataaaa
aatgatgatggaaatgaaataatcggtgatgttggagatgaagttacagaagaactatta
aacaaaataatcgaagtcggtataaaagaagttgaagtatttaaaacagaaccacaatta
ttagaaacagaagatggagaaataaggttagttggagaaaagaaagcatatttaattaac
ccaaaagaacctgcaagatttgaaagaaaattattaagaattacaaaatcctctctggaa
agagaaggttggttaggcgctgcctcattccaacaaacagttcaagtattgacagaagct
gctttagaaggaagagaagattatctaatgggtctaaaagaaaatgtaattgttggacaa
ccaattccagctggtactggattaaaggctttcttagaatcagaaatttctgtattcgaa
ttaccaacattcccaacagaagaaactcaatcagaagaaagtgctgcatcttaa
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