Marinitoga aeolica: JRV97_08550
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Entry
JRV97_08550 CDS
T09568
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
maeo
Marinitoga aeolica
Pathway
maeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JRV97_08550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maeo03019
]
JRV97_08550
03009 Ribosome biogenesis [BR:
maeo03009
]
JRV97_08550
Enzymes [BR:
maeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JRV97_08550
Messenger RNA biogenesis [BR:
maeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JRV97_08550
Ribosome biogenesis [BR:
maeo03009
]
Prokaryotic type
rRNA helicases
JRV97_08550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
PhoH
CMS1
ERCC3_RAD25_C
NDK
Utp25_C
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WGS64418
UniProt:
A0ABY8PPE9
LinkDB
All DBs
Position
1820049..1821641
Genome browser
AA seq
530 aa
AA seq
DB search
MVKLEKFRELGLSEGTLKALKKKGFEEPTPIQEKVIPLLLAQDVDIIGQAQTGTGKTAAF
GLPLIEKLKPSKKVKAIILTPTRELAVQVAEEINSLKGSNKLNVLPIYGGQSIENQISRL
KKGVDIVVGTPGRVLDHIRRRTLNLSYVKYFILDEADEMLDMGFIDDVEEILSNAPADRQ
ILLFSATMPSRIISLAKKHMKNYKIISVKPEQLTTELTEQIYFEVSEQDKFEALCRIIDI
EPEFYGLVFCRTKVDVDTVSNRLIDRGYNAEALHGDLSQYQRERILKKFKSKRANILVAT
DVAARGIDINDLTHVINYSLPQNPESYVHRIGRTGRAGKEGTAITFVTPEEYRKLLFIKR
ISKSNIKKMPIPKVKDVIETKKLRIKNEINSILEHGTYENYMSLAKEMLEDHDPQEVMAA
VLKYAFQDELDERNYREIKEVSSVDKKGKTRLFVALGRDDDLTIEKLKNMIKEYTNIQNI
YLKDVRILDKFSFMTVPFEEAEIILQAFKKKKRGRKPIISKAKEKKRKAD
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaattagaaaagtttagagagttaggtttatcagaagggacattaaaagcattg
aaaaagaaaggttttgaagagccgacaccgatacaggaaaaagttataccattattattg
gctcaagatgttgatattattggacaagcacaaacaggaacaggtaaaactgctgcattt
ggactgcctttaattgaaaaattaaaaccttcaaagaaagtaaaagctataatcttaacg
ccaacaagagaattagcagtacaggttgctgaagaaataaattctttaaaaggtagcaat
aaattaaatgttttacctatatatggtgggcaatccatagaaaaccaaattagcagatta
aaaaaaggtgtagatattgttgtaggaacaccaggtagggttttagatcatataagaaga
agaacactaaatttaagttatgtaaagtattttattcttgatgaagctgatgaaatgttg
gacatgggttttatagatgatgttgaagaaatattatcaaatgctccagctgataggcaa
atcttattattttcagcaacaatgccttcaagaattatatctttagctaaaaaacatatg
aaaaattataaaattatttctgtaaaaccagagcaattaacaacagaattaacagagcaa
atatattttgaagtttcagaacaggataaatttgaggcattatgtagaattatagacatt
gaaccggaattctatggccttgtattctgtagaactaaagtagatgtagatacagtatct
aataggttaattgatagaggatataatgcagaagcattacatggagatttatctcaatat
caaagagaaagaatattaaaaaaattcaaatcaaaaagagcaaatatattggtagctaca
gatgttgcagcaagaggtatagatattaatgatttgactcatgttatcaattattcttta
cctcaaaatccagaatcctatgttcatagaattggaagaactggcagggctggaaaagaa
ggaacagctataacttttgtaacacctgaagaatatagaaaattattgtttattaaacga
atttcaaaaagcaatattaaaaaaatgcctataccaaaggttaaagatgttatagaaacc
aagaaattaaggataaaaaatgaaataaatagtattttagaacatggaacatatgaaaat
tatatgtctttagcaaaagaaatgcttgaggatcatgaccctcaggaagtaatggcagca
gtattaaaatacgcatttcaagatgaacttgatgaaagaaattacagggaaattaaagag
gtttcttctgttgataaaaaaggaaaaacaagattatttgttgcgttaggaagagatgat
gatttaacaatagaaaaattaaagaatatgataaaagaatatacaaatatccaaaatata
tatttaaaagacgttagaatacttgataaattctcatttatgactgtaccatttgaagaa
gcagaaataattttacaggcatttaaaaagaaaaagagaggcagaaagcctataatatca
aaagcaaaagaaaaaaagagaaaggcggactaa
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