Macrococcus equi: ACMGE4_00490
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Entry
ACMGE4_00490 CDS
T11256
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
maeq Macrococcus equi
Pathway
maeq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maeq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMGE4_00490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maeq03019
]
ACMGE4_00490
03009 Ribosome biogenesis [BR:
maeq03009
]
ACMGE4_00490
Enzymes [BR:
maeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACMGE4_00490
Messenger RNA biogenesis [BR:
maeq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACMGE4_00490
Ribosome biogenesis [BR:
maeq03009
]
Prokaryotic type
rRNA helicases
ACMGE4_00490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
GerD
Cas3-like_C_2
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
XNZ48700
LinkDB
All DBs
Position
101356..102876
Genome browser
AA seq
506 aa
AA seq
DB search
MQKFRDLGISEPTINALEKMGFTEPTPIQTDSIPHTMAGRDVLGQAQTGTGKTGAFGIPL
IEKVRGQEGIKSLILAPTRELAVQVAEQLKAFSRGQGIQVATVFGGMPIDRQIRELKKKP
QIVVGTPGRVIDHLNRRTLKTEDINTLILDEADEMMNMGFIDDMRFIMDKLPKEQRQTML
FSATMPKAIQELVQKFMKDPIIVKTMTNVDSNPDIDEHYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYRAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDVESYTHRIGRTGRAGKHGMAISFVNPVEMDYIRQIEKSKN
RTMTALRPPTPGEVMKARELDVKTKVNGWIEKETEARIESIAQELINEHGDVKLVASLLQ
ELIKSNNDVDVQLTFEKPLGRKGGSGKSYGRGRGGNGGGRPGGSRSRSKDGGKDGRRKSF
DRGGKSGASKGGKKPFKARTFADHKK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttagagacctaggtatcagcgaacctaccataaatgcgctggagaaaatg
ggatttacagaacctacaccgattcaaacggatagtatccctcatacgatggcaggccgt
gacgttttaggccaagcgcaaactggtactggtaaaactggtgcttttggaattccttta
attgaaaaagttagaggccaagaggggatcaaaagtttaattcttgctcctacacgtgaa
ttagctgtccaggttgctgaacaattaaaagcatttagccgtggacaaggcattcaggta
gcgacagtattcggtggtatgccgattgatcgtcaaattagagaattaaagaagaaaccc
caaattgtagttgggacacctggtcgtgttatcgatcacttaaaccgtcgtacgttaaag
actgaagacattaatacgttaatcttagatgaagctgacgaaatgatgaacatgggattc
atcgatgatatgcgttttatcatggataaattaccgaaagaacaacgtcaaacgatgtta
ttctctgcgacaatgccgaaagcaatccaggaactcgttcaaaagttcatgaaagatcct
atcattgttaaaacaatgacaaacgttgattcaaatcctgatatcgacgagcattacaca
atcgttaaagaattagagaagtttgatactttcactaatttcttagatgttcaccaacca
gaattagctatcgtattcggacgtacgaaacgtcgtgtcgatgagttaacaagtgcgtta
atctctaaaggctaccgtgcagaaggtttacacggtgacattacacaggcgaaacgttta
gaagttcttaagaaattcaagaacgaccaaattgacatccttgttgcaacagacgttgct
gcacgtggattagatatttctggcgtatctcacgtttataacttcgatattcctcaagat
gttgaaagttatactcaccgtatcggtcgtacaggccgtgccggtaaacatggtatggcg
atttcattcgttaacccagttgagatggattatatccgtcaaattgaaaagtctaaaaat
cgtacaatgacagctttacgcccaccaacacctggtgaagtaatgaaagctcgtgaatta
gacgtgaagactaaagttaacggttggatcgaaaaagaaactgaagcacgtattgaatca
atcgctcaagaattaattaacgaacatggtgatgtgaaattagtagcgtcattattacaa
gagttaattaaatcaaacaacgatgtagacgttcaattaacatttgaaaaaccacttggt
cgtaaaggtggaagtggtaaatcatatggacgcggacgtggtggaaatggtggaggccgc
ccaggtggatctcgtagccgttctaaagatggcggtaaagatggtcgtcgtaagtcattt
gaccgtggtggtaaatctggcgcttctaaaggcggtaaaaagccattcaaagctagaaca
tttgcagaccataaaaaataa
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