Microvirgula aerodenitrificans: DAI18_01705
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Entry
DAI18_01705 CDS
T09834
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAI18_01705 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maer03021
]
DAI18_01705 (rho)
03019 Messenger RNA biogenesis [BR:
maer03019
]
DAI18_01705 (rho)
Transcription machinery [BR:
maer03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DAI18_01705 (rho)
Messenger RNA biogenesis [BR:
maer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DAI18_01705 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA
AAA_19
nSTAND_NTPase5
Mor
Motif
Other DBs
NCBI-ProteinID:
AVY92897
UniProt:
A0A2U3THK2
LinkDB
All DBs
Position
complement(355190..356446)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLSDLKHQHVSQLVETAASLEIEGANRLRKQDLIFALLKNQAKKGESIFGDGTLEVLPD
GFGFLRSPDTSYLAGPDDIYISPSQIRRFNLHTGDTIEGEIRMPKEGERYFALVKVDRIN
GETPDKAKNKILFENLTPLHPTERMSLERDIKSEENITGRVIDLVAPIGRGQRSLLVAPP
KSGKTVMLQHIAHAIAANHPDVILIVLLIDERPEEVTEMTRTVKGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRI
LGAARNIEEGGSLTIIGTTLIDTGSRMDDVIYEEFKGTGNSEIHLDRRMAEKRIFPAINI
NRSGTRREELLLPQDQLQRLWVLRKLLYPMDDIEAMEFMLDKLKSTKTNQQFFDSMRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttccgaccttaaacatcagcacgtcagccaactcgtcgagacggcggcttca
ctcgaaatcgaaggcgcgaaccgcctgcgcaagcaggatctcatctttgcgcttttgaaa
aaccaggccaagaaaggcgaaagcatttttggcgatggcacgcttgaagtcctgcccgac
ggcttcggttttctgcgctccccggatacctcgtatctggccggcccggatgatatctat
atcagcccgtcgcagatccgccgcttcaaccttcataccggtgacaccattgagggtgaa
atccgcatgccgaaggaaggcgagcggtatttcgcgctggtcaaggtcgaccgcatcaac
ggtgagaccccggacaaggccaagaacaagatcctgttcgaaaacctgacgccgctgcat
ccgaccgagcggatgtcgctggaacgcgacatcaagagcgaagaaaacatcaccggtcgc
gtcatcgacctggtcgcgccgatcggccgtggtcagcgcagcctgctggttgctccgccg
aagtccggcaagaccgtgatgctgcagcatatcgcccatgcgatcgccgccaaccatccg
gacgtgatcctgatcgtgctgctgatcgacgaacggccggaagaagtgacggaaatgacc
cggacggtcaagggtgaagtggtggcgtcgaccttcgacgaaccggccacccgccacgtc
caggtcgccgaaatggttatcgagaaggccaagcgcctggtcgagcacaagaaggacgtt
gtgatcctgctcgactcgatcacccgtctggcccgtgcctacaacaccgtcgtgccgagt
tccggcaaagtgctgaccggtggtgtggacgccaatgcgctgcaacgcccgaagcgcatt
ctcggtgcggcgcgcaacatcgaagagggcggttcgctgaccatcatcggcactacgctg
atcgataccggcagccgcatggacgatgtgatctacgaagaattcaagggcaccggcaac
tcggaaatccacctggaccgccgcatggcggaaaagcggatcttcccggcgatcaacatc
aatcgctccggcacccgccgcgaggaattgctgctgccgcaggaccagctccagcgcctg
tgggtgctgcgcaagctgctgtacccgatggacgacatcgaggcgatggagttcatgctc
gacaagctcaagagcaccaagaccaaccagcagttcttcgactcgatgcgtcgctga
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