Microvirgula aerodenitrificans: DAI18_02610
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Entry
DAI18_02610 CDS
T09834
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAI18_02610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maer03019
]
DAI18_02610
Enzymes [BR:
maer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAI18_02610
Messenger RNA biogenesis [BR:
maer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DAI18_02610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVY93056
UniProt:
A0A2S0P6T0
LinkDB
All DBs
Position
complement(545553..546938)
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AA seq
461 aa
AA seq
DB search
MSFAELGLPAEIQRAIDELGYSEPTPIQARAIPEVLAGRDLLAAAQTGTGKTAAFTLPIL
ARLRRHASTSVSPAMHPVRCLILTPTRELADQVASSVEQYRKYLPLRHAVVFGGINIDPQ
KEALRRGVEIVVATPGRLLDHIEQKTVILNRVEMLVLDEADRMLDMGFIPDIRRIISLLP
KTRQTLLFSATFSAEIKRLSSEFMTDPITIEVARQNATAASIEQRVFAVDGARKRQLLGR
LINEREMTQVIVFCRTKQGADRLARELRQFDHIQAEAIHGDKAQQARLDTLASFKDGKLR
VLVATDIAARGLDITELPYVVNFEMPNSPEDYVHRIGRTGRAGSSGVALSLMSEDEQRLL
EAIEKLTRQTLKPECHNAFWPSWIPRPVTERPPRPALAERKPAPVKASRIENVDNDRSDV
DDDDDDELPLRQGRRLPLTPRFQREPREVPALLLPPRYERA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgccgaactgggactgcccgcagagattcagcgtgctattgatgagctcggc
tacagcgagccaaccccgattcaggcgcgcgccatccctgaagtgctcgccggacgggac
ctgcttgccgccgcccagaccgggaccggcaagactgccgcgttcacgctgccgatcctg
gcgcgcctgcgccggcatgccagcaccagcgtcagcccggccatgcacccggtgcgctgc
ctgatcctgacgccgacccgcgaactggccgaccaggttgcctcgtcggtcgagcaatac
cgcaaatacctgccgctgcgtcatgccgtcgtttttggcgggatcaatattgatccgcag
aaagaagcgctgcgccgcggggtggaaatcgtcgtcgccacaccgggacgcctgctcgac
catatcgaacagaaaaccgtcatcctgaaccgggtcgaaatgctggtgctggacgaagcc
gaccgcatgctcgacatgggcttcatccccgacatccgccgcattatcagcctgctgccg
aagacgcgtcagaccctgctgttctccgccacgttctcggccgagatcaagcgtctgtcc
agcgaattcatgaccgacccgatcaccatcgaggtcgctcgccagaacgcgaccgcggcg
tcgatcgaacagcgcgtgttcgccgtcgacggtgcccgcaagcgccagctgcttggccgc
ctgatcaatgagcgcgaaatgacccaggtcatcgtgttctgccgcaccaagcagggtgcc
gaccggctggcacgcgaactgcgccagttcgatcacatccaggccgaagccatccacggc
gacaaggcccagcaggcgcgactggataccctggcttcgttcaaggatggcaagctgcgc
gtgctggtggcaaccgacatcgccgcgcgcgggctcgacatcaccgaactgccgtacgtg
gtgaacttcgagatgccgaattcgcccgaagactacgtgcaccgcattggccgtaccggc
cgcgccggcagctccggtgttgccctgtcgctgatgagtgaagacgaacagcgcctgctc
gaagccatcgaaaagctgacccggcagacgctgaagccggaatgccacaacgccttctgg
ccgagctggattccgcgtccggtgaccgagcgcccgccccgcccggcactggccgaacgc
aaaccggcgccggtgaaggccagccgcatcgagaacgtcgacaacgatcgcagcgatgtg
gatgacgacgacgatgacgagctgccgctcaggcagggtcggcgtttgccgctgaccccg
cgcttccagcgcgagccgcgcgaagtgccggcactgttgctgccgccgcgttacgagcgc
gcctga
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