Microvirgula aerodenitrificans: DAI18_03115
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Entry
DAI18_03115 CDS
T09834
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAI18_03115 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maer03019
]
DAI18_03115 (recQ)
03400 DNA repair and recombination proteins [BR:
maer03400
]
DAI18_03115 (recQ)
Enzymes [BR:
maer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAI18_03115 (recQ)
Messenger RNA biogenesis [BR:
maer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DAI18_03115 (recQ)
DNA repair and recombination proteins [BR:
maer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DAI18_03115 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AVY93136
UniProt:
A0A2S0P709
LinkDB
All DBs
Position
complement(664898..666724)
Genome browser
AA seq
608 aa
AA seq
DB search
MNTPQTTLSHASQILRDVFGYPDFRGPQADIVCHVAEGQHALVLMPTGGGKSLCFQIPAL
MRSGLAVIISPLIALMQDQVSTLTELGVAAAFLNSTQDAEQARTVARAARAGTLKLLYVA
PERLLSPRFLDWIASMEIGLFAIDEAHCVSQWGHDFRPEYRELGVLADRFPNVPRVALTA
TADPDTREEIRHYLRLEQARVFLSSFDRPNLTYHVIEKHQAKQQLLRFIQQEHAGQSGIV
YCLSRKRVEDTAAFLRENGIDAMPYHAGFDARTREQHQTRFIREDNVVMVATIAFGMGID
KPDVRFVAHLDLPKSPEGFYQESGRAGRDGLPATSWLCYGLSDMVQLQQMIFDGDVDETR
RSVELGKLDAMLAYCETASCRRQLLLAHFGEQIEPCGKCDNCLHPPVTQDMTTQVQKLLS
CIYRVSQRAAANHVIEILLGRETANVMSRGHQHLSTYGVGKELSQRGWRSLVRQLVAQGY
LQVDVMNYQALRLTDKCRPVLKGQEQVWLRPLREDKKTPRSGSQDAERWLRTEREERLWQ
GLRSWRKRMADEHNVPAYAVFSDRTLRELVEQRPQSEDGLRQVYGVGGSKLARYGDDLLT
VIAEFSDQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacgccccagaccaccctttcccacgccagccagatcctgcgcgacgtatttggt
tacccggatttccgcggcccgcaggccgacatcgtctgccacgttgccgaaggacagcat
gcgctggtgctgatgccgaccggtggcggcaagtccctgtgcttccagattcccgcgctg
atgcgcagcggactggccgtcatcatcagcccgctgatcgcactgatgcaggaccaggtt
tccacactgaccgaacttggcgtcgccgcggccttcctcaattcgacccaggacgccgag
caggcacgcaccgtggcgcgcgccgcgcgtgccggcacgctgaaactgctgtacgtcgca
ccggaacgcttgctcagcccgcgctttctcgactggatcgcgtcgatggaaatcggcctg
ttcgccattgacgaagcgcattgcgtcagccagtggggacacgacttccgtccggaatac
cgggaactcggcgtactggccgatcgctttccgaacgtgccgcgcgttgccctgaccgcc
accgccgacccggatacccgcgaggagatccgccattacctgcggctggaacaggcgcgg
gtcttcctgtccagctttgaccggccgaacctgacctatcacgtcatcgaaaagcaccag
gccaagcagcagttgctgcgctttatccagcaggagcacgccgggcagagcggcatcgtc
tactgcctgtcgcgcaagcgggtggaagataccgccgccttcctgcgcgaaaacggcatc
gacgccatgccgtatcacgccggcttcgatgcacgcacccgcgaacagcaccagacccgc
tttatccgcgaggacaatgtggtgatggtcgcaaccatcgccttcggcatgggcatcgac
aagcccgatgtccgtttcgtcgcccatctcgacctgccgaaaagcccggaaggtttctat
caggagtccggccgcgccggccgtgacggactgccggcgaccagctggctgtgctacgga
ctgagcgacatggtccagctgcagcagatgatcttcgacggcgatgtcgacgaaacccgc
cgcagcgtcgaactcggcaagctggatgcgatgctggcctactgcgaaaccgccagttgc
cgccgccagttgctgctggcccacttcggcgagcagatcgagccgtgcggcaagtgcgac
aactgcctgcatccgcctgtgacccaggacatgaccacccaggtgcagaagctgctgtcg
tgcatctatcgcgtcagccagcgtgcagcggccaaccatgtgatcgagatcctgctcggg
cgcgaaacggcgaacgtgatgagccgtggccaccagcacctgtcgacctatggcgtcggc
aaggaactgtcgcaacgcggctggcgctcgctggtgcgccagctggtggcacagggttat
ctgcaggtcgacgtgatgaactaccaggcgctgcgcctgaccgacaagtgccggccggtg
ctgaaaggccaggaacaggtgtggctgcggccgctgcgggaagacaagaagaccccgcgc
agcggcagccaggacgccgagcgctggctgcgtaccgaacgcgaagaacggctgtggcag
ggactgcgcagctggcgcaagcgaatggccgacgaacacaacgtcccggcctacgcggtg
ttctccgatcgcaccctgcgcgagctggtcgagcaacggccgcaaagcgaagatggcctg
cgccaggtctacggcgttggcggcagcaagctggcgcgctatggcgacgacctgctgacg
gtgatcgccgagttttccgaccagtag
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