Microvirgula aerodenitrificans: DAI18_05705
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Entry
DAI18_05705 CDS
T09834
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer03420
Nucleotide excision repair
maer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DAI18_05705
03430 Mismatch repair
DAI18_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maer03400
]
DAI18_05705
Enzymes [BR:
maer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAI18_05705
DNA repair and recombination proteins [BR:
maer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DAI18_05705
MMR (mismatch excision repair)
Other MMR factors
DAI18_05705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
DUF3553
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AVY93597
UniProt:
A0A2S0P8H9
LinkDB
All DBs
Position
complement(1210662..1212818)
Genome browser
AA seq
718 aa
AA seq
DB search
MNSEFLAGLNPAQREAVTTPHSALVLAGAGSGKTRVLTTRIAWLIREGLASPAGILGVTF
TNKAAREMQTRLTAMLPVNPKQMWIGTFHGLANRLLRLHHRDVGLPATFQILDSQDQLAA
IKRLLKTLQLSDETYPPRQVMSFINGSKEKGLRADRFAPADHFEVKLTEIWREYDRQCRR
EGVVDFAELLLASYELLSGNTALRQHYQSRFRHILVDEFQDTNRLQYAWLKCFAGDDNTV
FAVGDDDQSIYAFRGAEVGNMRDFLSDYAAGEPIRLEQNYRSTSRILAAANAVIANNRGR
LGKTLWTDAGEGEQIRVYRGWSDGEEAEFIAEEARALKREGVSLADVAVLYRSNAQSRAL
EHALFQAGLSYRVYGGLRFFERQEIKHALAYLRLLANPADDNALLRIINLPARGIGARTV
DGIQMAARDSGDSLWQAACQVGGRAAASVGRFVLLIEELRTAADTLGFAELVSHVIDASG
LTAMYQADKDGSERLENLSELVNAAVSFVPDDPAQAMVEFLAHASLESGDHEAAAGEEAI
TLMTVHAAKGLEFDSVFLTGLEEGLFPHEQSFADPDGLEEERRLLYVAITRARRRLTLSY
AQTRMLHGQTRYPLPSRFLDELPPELLHPINIEPVVRKPVETAAPWAPTGRKTRTPVRTA
APEWVGGFRVGQTVTHPKFGLGVITDAEAGGGESRVEVNFQDAGRKWLDLRYAKLSAV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgaatttctggccggtctgaacccggcgcagcgcgaagcggtgacgaccccg
cattccgcactggtgctggccggcgcgggcagcggcaagacccgcgtcctgaccacgcgg
atcgcctggctgatccgcgagggactggccagcccggccggcattctcggcgtgaccttt
accaacaaggccgcgcgggaaatgcagacccgtctgactgccatgctgccggtcaacccg
aaacagatgtggatcggcacctttcacgggctggccaatcgcctgctgcgcctgcatcac
cgcgacgttggcctgccggcgaccttccagatcctcgacagccaggaccagctcgcggca
atcaagcggttgctgaagacgctgcagctgtcggatgagacctacccgccgcgccaggtg
atgtcgttcatcaacggcagcaaggaaaaggggctgcgggcggaccgctttgcgccggcc
gatcacttcgaggtcaaactgacggaaatctggcgggaatacgaccgccagtgccggcgc
gaaggcgtggtcgactttgccgagctgctgctggcctcgtacgaactgctgtccggcaac
accgcactgcgccagcattaccagagccgcttccgtcatattctggtcgatgaattccag
gataccaaccgcctgcagtacgcgtggctgaaatgttttgccggcgacgacaacaccgtg
tttgccgtcggtgacgacgaccagtcgatctacgcgttccgcggcgccgaagtcggcaat
atgcgcgacttcctgagcgactacgcggccggcgagccgatccggcttgaacagaactac
cgctcgacatcgcgcatcctggccgccgccaatgcggtgatcgccaacaaccggggccgg
ctcggcaagacgctgtggaccgatgccggcgaaggcgagcagatccgcgtctaccgcggc
tggagtgatggcgaggaagccgaattcatcgccgaggaggcgcgggcgctgaagcgcgaa
ggcgtgtcgctggccgacgtggcggtgctgtatcgcagcaacgcccaaagccgggcgctc
gagcacgcgctgttccaggccgggctgtcgtaccgggtctatggcgggctgcgtttcttc
gagcgccaggaaatcaagcatgcgctggcctacctgcgcctgctggccaacccggctgac
gacaatgcgctgctgcgcatcatcaacctgccggcgcgcggtatcggtgcccgcacggtg
gacggcatccagatggcggcccgcgacagcggcgacagcctgtggcaggccgcctgtcag
gtcgggggccgtgcggcggccagcgttggccgttttgtgctgctgatcgaagaactgcgc
accgcggccgacacactgggctttgcggagctggtcagccacgtgatcgacgccagcggc
ctgaccgcgatgtaccaggcggacaaggacggtagcgaacggctggaaaacctgagcgaa
ctggtcaatgccgccgtgtccttcgtcccggacgatccggcacaggcgatggtcgaattc
cttgcccacgcgtcgctcgaatcgggtgaccacgaggccgccgctggcgaggaggcgatc
acgctgatgaccgtgcatgcggccaaggggctggagttcgacagcgtgttcctgaccggg
ctggaagagggactgttcccgcacgagcagagctttgccgatccggacgggctggaggaa
gagcgaaggctgttgtatgtcgccattacccgcgcccgccgccggctgaccttgagttat
gctcagacccgcatgctgcacggacagacacgctatccgctgccatcgcgctttctggac
gaattgccccccgaactgctgcatccgatcaatatcgaaccggtcgtgcgcaagccggtc
gaaacggccgccccgtgggcaccgaccgggcgcaagacgcgcacaccggtcaggacagcc
gcccccgaatgggtcggcggtttccgggtcggccagaccgtgactcatccgaaattcggc
ctgggtgtcattaccgacgccgaggctggcggtggcgagtcgcgggtagaagtgaatttt
caggacgcaggacgtaaatggctcgatctgcgctacgccaaactgtccgctgtgtga
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