Microvirgula aerodenitrificans: DAI18_12185
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Entry
DAI18_12185 CDS
T09834
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer02020
Two-component system
maer02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DAI18_12185
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DAI18_12185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maer03021
]
DAI18_12185
Transcription machinery [BR:
maer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DAI18_12185
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AVY94707
UniProt:
A0A2S0PBQ6
LinkDB
All DBs
Position
complement(2581817..2583262)
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AA seq
481 aa
AA seq
DB search
MKQSLQLKLGQQLTLTPQLQQSIRLLQLSTLDLQQEVEQFIADNPLLERDEGRDENGAEV
SDAGEIAINGHDEPREPPQQQDGAGGNDDSATDLNLVNDWSSYGRNGSDEDDDWDPHQNL
TRATTLREHLLAQLAELPLSVRDRAMAMVIIEELDDDGYLPCPLEELAVHLPAELEIDPD
ELTVALTLVQQFEPAGVASRDLTESLLLQLAARPESPARPLAQDIVRHHLPLLANRDFTR
LRRATGADDESIRQAQALIASLNPRPAAGFGSGDTHYVMADVLVRRDRNGIWLPLLNPAT
QPKLKVNQLYAQMLSRHRGEAGQLSGRLQEAKWLIRNIEQRADTILRVSQVIVERQQAFF
DQGEVAMRPMVLRDVADELGLHESTISRVTSSKYLICPRGVFELKYFFGTALDTDSGGEC
SATAIKARLRKLIADEDPHKPLSDSVLAERLGDEGIQVARRTVAKYREALLIPPVNQRKT
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagcctccagctcaagctgggtcagcaactgacccttacgccccaactgcaa
cagtcgatccggctgctgcagctctcgacgctggacttgcaacaggaagtggaacagttc
atcgccgacaatccgctgctggagcgcgacgagggccgtgacgaaaacggcgcggaagtc
agcgatgccggcgagattgccatcaacggccatgacgagccgcgtgagccaccgcagcag
caggacggggccggcggcaacgacgacagcgccaccgacctgaacctggtcaacgactgg
tccagctacggccgcaacggcagcgacgaagacgacgactgggacccgcaccagaacctg
acccgggccaccacgctgcgcgagcatctgctggcgcaactggccgagctgccgctgtcg
gtccgcgaccgggcaatggcgatggtcatcatcgaggaactggacgacgacggctacctg
ccctgcccgctggaagagcttgccgtccatctgccggcggaactggagatcgatcccgac
gagctgaccgtggcgctgaccctggtccagcagttcgagccggccggtgtcgcctcgcgc
gatctgaccgaatcgctgctgctgcaactggcggcccggcccgagtcgccggccaggccg
ctggcgcaggacatcgtccgccaccacctgccgctgctcgccaaccgcgacttcacccgg
ctgcgccgcgccaccggcgccgacgacgaatcgatccggcaggcccaggcgctgatcgcc
tcgctgaacccgcgtccggccgccggtttcggcagcggcgacacccactacgtgatggcc
gacgtgctggtccgtcgcgatcgcaacggaatctggctgcccctcttgaatcctgcgact
cagcccaaattgaaagtaaatcagctgtacgcgcagatgctcagccggcaccgcggcgag
gccggacaattgtccggccggctgcaggaagccaagtggctgatccgcaacatcgaacag
cgggccgacactatactcagagtgtcgcaggtcatcgtcgagcgacagcaggcgttcttt
gatcagggtgaagtcgcaatgcgccccatggtgctgcgcgacgtcgccgacgaattggga
ttgcacgagtcgaccatctcccgcgtgaccagcagcaagtatctgatctgtccgcgtggc
gtgttcgaactcaagtacttcttcggcacggcgctggacaccgattccggcggcgaatgc
tcggctaccgccatcaaggcgcggttgcgcaagctgattgccgacgaagacccgcacaaa
ccgctgtcggacagcgtgctggccgaacggctcggtgacgagggcatccaggttgcccgc
cgcaccgtcgccaagtatcgcgaggcattgctgataccaccggtaaaccagcggaaaacg
atttaa
DBGET
integrated database retrieval system