Microvirgula aerodenitrificans: DAI18_13275
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Entry
DAI18_13275 CDS
T09834
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer03030
DNA replication
maer03430
Mismatch repair
maer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DAI18_13275
03430 Mismatch repair
DAI18_13275
03440 Homologous recombination
DAI18_13275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maer03032
]
DAI18_13275
03400 DNA repair and recombination proteins [BR:
maer03400
]
DAI18_13275
Enzymes [BR:
maer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DAI18_13275
DNA replication proteins [BR:
maer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DAI18_13275
DNA repair and recombination proteins [BR:
maer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DAI18_13275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AVY94902
UniProt:
A0A2S0PC37
LinkDB
All DBs
Position
complement(2828641..2832078)
Genome browser
AA seq
1145 aa
AA seq
DB search
MTTPRFVHLRLHTEFSVTDGITRVDDAVKRAVGERMPALGISDLMNLFGMVKHYKACLKQ
GVKPIIGVDAWLENETDRDQPFRLLLIAMNRTGYHRLCELMTDAYRTNQYRGRAELKREW
LDAASCEHLILVSGAQFGDVGQALLAGNLEQARQRATEWQTRFPGRCYLEIQRIGKPEVE
TCVDRTLWLAGETGLPVVATHPIQFLDQDDFKAHEARVCIAEGEMLGNPKRPRRYTDQQY
FKSADDMAALFADVPEALENSVEIARRCNIEIELGKNYLPLFPTPAGMTLDDYLVHRAEE
GLVERMQALYPDEALREQNMPRYRDRLKFELDTIIQMGFPGYFLIVADFINWAKGNGCPV
GPGRGSGAGSLVAFSIGITDIDPLAYALLFERFLNPERVSMPDFDIDFCQDNRWRVIEYV
REKYGADAVSQIATFGTMAAKAVVRDVGRVLDLPYSFCDGLSKLIPAAPGKQYSLDDAVE
MEPTLKERIANEEEVAELWTLAKKLEGVTRNIGMHAGGVLIAPGQIVDFCPMYQASGDDA
SPVSMLDKGDVEEVGLVKFDFLGLRNLTIIELAVEYIHKLDPKFDIDLNHMGFDDVAAYR
ILQQANTTAVFQLESDGMKKLLEKLKPDRFEDIIAVLALYRPGPLGSGMVDDFILRKAGK
QAVDYFHPDLTACLDPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKAEEMDKH
RGLFVAGALKNGYKQELAEYLFDLMAKFAEYGFNKSHTAAYAVVSYQTAWLKAHYPSAFM
AATMSSELDNTDQLRVFYDDSLKNGLVFLPPDVNEGFYRFVPTDGKHIRYALGAVKGTGE
AAVEHIVEVRREGRFTDLFDFCRRTDKRLVNRRTIEALIRAGAFDAIDDNRAKLLANVEL
AMSVAEQEAENINQGGLFDMFEAEDVPTVDMVDVKPWDEATRLTEEKTAIGFFLSGHPFH
AYESTVRRFIRTPLNRLSPKKEPQWLAGTITGIRTKIGNRGKMAFIQLDDGSAKVEVSIF
SEAFDEARHKLKEDVVLVVSGKVSHDDFTGGMRIVADTVFDLAEAKSQFAKALTVDMPSS
RADLNRLRTLISPHVGGGCPLRIDYRNADARCLLQLGDDWRVKLDDGMLAALREWLGEQA
VKVVF
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgactacaccccgtttcgttcaccttcgcctgcacaccgaattttccgtcaccgacggc
atcacccgcgtcgatgacgcggtgaagcgcgccgttggcgaacgcatgcccgcgctgggc
atctccgacctgatgaacctgttcggcatggtcaagcattacaaggcctgcctgaagcag
ggcgtgaagccgattatcggcgtcgacgcctggctcgaaaacgagactgaccgtgaccag
ccgttccgcctgctgctgatcgcgatgaaccgcaccggctatcaccgcctgtgcgagctg
atgaccgatgcctaccgcaccaaccagtatcgcggccgcgccgaactgaagcgcgagtgg
ctggatgcggcatcgtgcgaacacctgatcctggtgtccggcgcccagttcggtgacgtc
ggccaggccctgctggccggcaatctggaacaggcgcggcaacgcgccaccgagtggcag
acacgttttcccggccgctgctatctggagatccagcgcatcggcaaaccggaggtcgaa
acctgcgttgaccgcacgctgtggctggccggcgaaaccggactgccggtggtcgccacc
cacccgatccagttcctcgaccaggacgacttcaaggcgcacgaagcccgggtctgcatt
gccgagggcgaaatgctcggcaacccgaagcgcccgcgccgctataccgaccagcagtac
ttcaagtctgccgacgacatggcggcgctgtttgccgacgtgccggaagcactggaaaac
agcgtcgagatcgcccgtcgctgcaatatcgagatcgaactcggcaagaactacctgccg
ctgttcccgaccccggccggcatgacgctggacgactacctggtccaccgcgccgaagaa
ggtctggtcgagcgcatgcaggcgctgtacccggatgaagcgctgcgcgagcagaacatg
ccgcgctaccgcgaccggctgaagttcgagctcgacaccatcatccagatgggcttcccg
ggctacttcctgatcgtggccgactttatcaactgggccaagggcaacggctgcccggtc
ggtccgggccggggttccggcgccggctcgctggttgccttcagcatcggcattaccgac
atcgacccgctggcctacgccctgctgttcgagcgcttcctgaacccggaacgggtgtcg
atgcctgacttcgacatcgacttctgccaggacaatcgctggcgcgtgatcgagtatgtg
cgcgagaaatacggcgccgacgccgtcagccagattgccaccttcggcaccatggccgcc
aaggccgtggtgcgcgacgtcggccgcgtgctcgatctgccgtactcgttctgcgacggg
ctgtcgaagctgatcccggccgcgccgggcaagcagtactcgctcgacgacgcggtcgag
atggagccgacgctgaaggaacgcatcgccaacgaggaagaagtcgccgagctgtggacg
ctggcgaagaaactcgaaggcgtgacccgcaatatcggcatgcatgccggcggcgtgctg
atcgccccggggcagatcgtcgacttctgcccgatgtaccaggcgtccggcgatgacgca
tcgccggtgtcgatgctcgacaagggcgacgtcgaggaagtcggtctggtcaagttcgac
tttctcggcctgcgcaacctgaccatcatcgagctggcagtcgaatacatccacaagctc
gatccgaagttcgacatcgacctcaaccacatgggcttcgacgacgtcgccgcctatcgc
atcctgcagcaggccaacaccaccgccgtgttccagcttgaatcggacgggatgaagaag
ctgctggaaaagctcaagcccgaccgcttcgaagacatcatcgccgtgctggcgctgtac
cgtccgggcccgctcggctcgggcatggtcgacgacttcatcctgcgcaaggccggcaag
caggccgtcgactacttccaccccgacctgaccgcgtgtctcgatccgacctatggcgtg
atcgtgtaccaggaacaggtgatgcagatctcgcagatcatcggcggctacacgctcggc
ggcgccgacatgctgcggcgggcgatgggcaagaaaaaagctgaggagatggacaagcac
cgcgggctgttcgtcgccggcgcgctgaagaacggctacaagcaggaactggccgagtac
ctgttcgacctgatggcgaaattcgccgagtacggcttcaacaagtcgcacaccgccgcc
tacgccgtggtcagctaccagaccgcatggctgaaggcgcactacccgtcggcattcatg
gccgcgaccatgtcgtcggaactggacaataccgaccagttgcgggtgttctacgacgat
tcgctgaaaaacgggctggtgttcctgccgccggacgtcaacgagggcttctaccgcttc
gtgccgactgacggcaagcacatccgctatgcgctcggtgcggtcaagggcaccggcgaa
gccgcggtcgagcatatcgtcgaggtccgccgcgaaggccgctttaccgacctgttcgac
ttctgccgccgcaccgacaagcgtctggtcaaccgccgcaccatcgaggcgctgatccgt
gccggcgccttcgacgccatcgacgacaaccgtgccaaactgctggccaacgtcgaactg
gcgatgtcggtcgccgagcaggaagccgagaacatcaaccagggcggcctgttcgacatg
ttcgaggccgaggacgtgccgacggtggacatggtcgacgtcaagccgtgggacgaggcc
acccggctgaccgaggaaaagaccgccatcggcttcttcctgtccggtcatccgttccat
gcctacgaatcaaccgtgcgccgctttatccgcacgccgctgaaccggctgtcgccgaag
aaggaaccgcagtggctggccggcaccattaccggcatccgcaccaagatcggcaaccgc
ggcaagatggctttcatccagctcgacgacggctcggccaaggtcgaagtgtcgatcttc
agcgaggcgttcgacgaggcccgccacaagctgaaggaagacgtggtgctggtggtgtcc
ggcaaggtcagccatgacgactttaccggcggcatgcgcatcgtcgccgacaccgtgttc
gatctggccgaggccaaaagccagttcgccaaggcgctgaccgtcgacatgccgtcgtcg
cgcgccgacctgaaccggctgcgcacgctgatctcgccgcacgtcggcggcggctgcccg
ctgcgcatcgactaccgcaatgccgatgcgcgctgcctgctccagctcggcgacgactgg
cgggtcaagctcgacgacggcatgctggcggcgctgcgcgaatggctcggcgagcaggcg
gtgaaggtggtgttctga
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