Microvirgula aerodenitrificans: DAI18_13910
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Entry
DAI18_13910 CDS
T09834
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
maer
Microvirgula aerodenitrificans
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maer03009
]
DAI18_13910
Enzymes [BR:
maer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DAI18_13910
Ribosome biogenesis [BR:
maer03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DAI18_13910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
UPF0020
Methyltransf_11
TRAM
MTS
Methyltransf_12
Methyltr_RsmB-F
CMAS
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AVY95017
UniProt:
A0A2S0PCM3
LinkDB
All DBs
Position
complement(2984805..2986334)
Genome browser
AA seq
509 aa
AA seq
DB search
MLPIATIESLDHDGHGVAHVDGKTLFIDGALPFERVEYQSYRSKATYENADCTRVLEESF
MRARPRCPHFNVCGGCSMQHVEFNAQVAVKQRVLEDNLIRIGKVTPEVVLPAIYGPEWGY
RHRGRMSARWVARKGSVLVGFHEKRSSFIADMTECHILPQRISVLLVPLRGLIASLSICE
RMPQIEYAGGEDVDVLVLRTMDPLTAADEALVRDFADRHNAGRALPLQFWLQPKGPDTAH
PFYPLDAPRLCYRLPEFGIEMPYKPTEFTQVNPGINRVMVQRAMRLLDPQPGERIADMFC
GLGNFTLPIARSGATVLGMEGSAQLIERAIENATHNGLDHRVDYRMANLFDLTEASLTAL
GKFDKMLIDPPRDGAIDLVKSLNEDAPSRIVYVSCNPATLARDAGVLVNIKGYTLKAAGI
VNMFPHTGHVESIAWFEKTGPGLSREEVAALDAAEAEAREAAKAAKKARNAAAAKAKADE
EAARVARKAARLAHYLANQAAYDARSAKK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgttacccatcgccaccatcgaatcgctcgaccatgacggccacggcgtggcccacgtc
gacggcaagacgctgttcatcgacggcgcgctgcctttcgagcgtgtcgaataccagtcc
taccggagcaaggccacctacgagaacgccgactgtacccgggtgctggaagaaagcttc
atgcgcgccagaccgcgctgtccgcatttcaatgtctgcggcggctgctcgatgcagcac
gtcgagttcaatgcccaggtcgccgtcaagcagcgcgtgctggaagacaacctgatccgg
atcggcaaggtcacgccggaagtcgtgctgccggccatctatggcccggaatggggctac
cgtcatcgcggccgcatgtcggcacgctgggtcgcccgcaagggcagcgtgctggtcggt
ttccatgaaaagcgctccagctttatcgccgacatgaccgagtgtcacatcctgccgcaa
cgtatctcggtgctgctggtgccgctgcgcgggctgatcgcctcgctgtcgatctgcgag
cgcatgccgcagatcgaatatgccggcggcgaggatgtcgacgtgctggtgctgcgcacc
atggacccgctgaccgctgccgacgaggcgctcgtgcgcgatttcgccgaccgccacaat
gccggtcgcgccctgccgctgcaattctggctgcagccgaagggcccggacaccgcccac
ccgttctacccgctcgacgccccgcgcctgtgctaccgcctgccggagttcggcatcgag
atgccgtacaagccgaccgaattcacccaggtcaaccccggcatcaaccgggtgatggtc
cagcgtgcgatgcgcctgctcgacccgcagccgggtgaacgcatcgccgacatgttctgc
ggactgggcaatttcacgctgccgatcgcccgctccggcgcgaccgtgctcggcatggaa
ggcagcgcacagctgatcgagcgtgccatcgagaacgctacccacaacggcctcgatcat
cgcgtcgactaccgcatggccaatctgttcgacctgaccgaggcatcgctgaccgccctc
ggcaagttcgacaagatgctgatcgacccgccacgcgacggcgccatcgatctggtcaaa
tcgctgaacgaagacgcgccgtcacgcatcgtctacgtgtcgtgcaacccggccaccctg
gcacgcgatgccggcgtgctggtcaatatcaagggctacacgctgaaggcagccggcatc
gtcaacatgttcccgcataccggccacgtcgagagcatcgcctggttcgagaagaccggc
ccgggcctgagccgcgaagaagtcgccgccctcgatgcggctgaagccgaagcgcgcgag
gccgccaaggccgcgaaaaaggcccgcaacgccgcggcggccaaggccaaggccgacgag
gaagcagcccgcgtcgcccgcaaggccgcgcgcctcgcccactatctggccaatcaggcc
gcgtacgacgcccgcagcgcgaagaagtaa
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