Microvirgula aerodenitrificans: DAI18_16610
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Entry
DAI18_16610 CDS
T09834
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAI18_16610 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maer03400
]
DAI18_16610 (recD)
Enzymes [BR:
maer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DAI18_16610 (recD)
DNA repair and recombination proteins [BR:
maer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAI18_16610 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
AAA_22
RecD_N
nSTAND3
SLFN-g3_helicase
AAA_25
AAA_28
SCO6045_C
AAA_16
CbiA
UvrD_C
AAA
NTPase_1
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AVY95489
UniProt:
A0A2S0PDN2
LinkDB
All DBs
Position
3587274..3589097
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AA seq
607 aa
AA seq
DB search
MMTPDLFDDLPDLPPPAEPVAPPAAIAPTAMPRLPGHLAAALGALAPQRDSWVEQLLADC
VRALYDGDVCLHPGSRADRPADAESRLRASALVGAPGEVAPLILDHGWLYLARYQQFEQR
LAEQLLARARPPAGFDPQRARAAIDHVFGPPPAAHDGQRLAAASALASSFAIISGGPGTG
KTTTVTRLMAALVELGGQPPLRLRLAAPTGKAAARMSESIRQQKARLPLPPALLAQLPDS
AQTLHRLLGVQPNGGGFRHHAGRPLDLDVLVIDEASMVDLALLARVVDALPPDARLILLG
DKDQLDAVEAGSVFPALCAGRGLEADTRAMLATVTGQTPPDGPLPASRLGQVVAVLTHSH
RFGADSAIGQLARDIHTGNGEAVAGRLAAAPAPGGDDALSAGNGTPAALERIAADGYRAY
LACVHHGDEPAAVLAAFDRFRVLSAHRDGPDGVTQLNARIERALHLPADRPQYPGRPVIV
RENDYALGLFNGDIGILLDTPAGLRAHFAEADGGVRHLSPARLPAHDTAFAMTVHKSQGS
EFDRVLCVLPPADSPLATRALFYTAVTRARHAVCVWGDPAAARAAVMQVPTRQSGLARRL
QVTPGPA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccccgacctgttcgacgacctgcccgacctgccgcccccggcagaaccggtc
gcgcccccggcagcgatcgcgccgaccgccatgccgcgcctgcccggccacctggccgcc
gcactcggcgcgctggcgccacagcgcgacagctgggtcgaacaactgctggccgattgt
gtgcgtgcgctgtacgacggcgacgtctgcctgcatcccggcagccgtgccgaccggccg
gccgatgccgagagccggctgcgcgccagcgcactggtcggggcaccgggcgaagtcgca
ccgctgatcctcgatcatggctggttgtacctggcccgctatcagcaattcgagcagcgg
ctggccgaacagttgctggcccgcgcccggccgccggccggcttcgacccgcagcgtgcc
cgggccgccatcgaccacgtattcggcccgccgccggctgcgcacgatgggcagcggctg
gcggcggccagcgcgctggcatcgtcgttcgcgatcatttccggcggccccggcaccggc
aagaccaccaccgtcacccggctgatggcggccctggtcgaactgggcggtcagccgccg
ctgcgcctgcgcctggcagcgccgaccggcaaggccgccgcgcggatgagcgagtcgatt
cgccagcagaaggcgcgcctgcccctgccgccggccctgctcgcacaactgccggacagc
gcccagaccctgcaccgcctgctcggcgtgcagccgaatggcggcggtttccgccaccat
gccggccggccgctggatctcgacgtgctggtgatcgacgaggcgtcgatggtcgacctg
gcgctgctggcacgggtagtcgatgcgctgccgccagacgcgcggctgatcctgcttggc
gacaaggaccagctcgatgcggtcgaggccggcagcgtgttcccggcgctgtgcgccggc
cgtggcctggaggccgacacccgggccatgctggcgacggtcaccggccagacaccgccg
gacggcccgctgccggcgtcgcgtctgggtcaggtggtcgccgtgctgacccacagccat
cgtttcggcgccgacagcgccatcggccagctggcgcgcgacatccataccggcaacggc
gaagcggtcgccggccgccttgccgcggcaccggcgcccggtggcgacgacgcgctgagc
gccggcaatggcacaccggccgcgctggagcggatcgccgccgacggctaccgcgcttat
ctggcctgcgtgcaccacggcgacgagccggccgcggtactcgccgccttcgaccgtttc
cgcgtgctcagcgctcaccgcgacgggccggacggcgtgacccagctgaatgcccgcatc
gaacgcgcactgcatctgccggccgaccggccacagtaccccggccggccagtcatcgtg
cgcgagaacgactatgccctcgggctgttcaacggcgatatcggcatcctgctcgacacc
ccggccggcctgcgcgcccactttgccgaggccgacggcggcgtgcgtcacctgtctccg
gcccgcctgccggcgcacgacaccgccttcgcgatgacagtgcacaagtcgcagggctcg
gaattcgaccgtgtgctgtgcgtgctgccaccggccgactcgccgctggcgacccgcgcg
ctgttctataccgccgtcacccgcgcccgccacgccgtctgcgtctggggcgacccggcc
gccgcgcgggccgcggtcatgcaggtaccgacgcgccagtccggactggcgcgccgcctg
caggtcacgcccgggccggcatga
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